RNA–Protein interactions for RNA: ENST00000430617.6

ATG4B-212, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 3

Gene ATG4B, Length 623 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-212ENST00000430617 SLC5A9Q2M3M2 681 aa11.13□□□□□ -0.63
ATG4B-212ENST00000430617 SH3PXD2AQ5TCZ1 1133 aa11.13□□□□□ -0.63
ATG4B-212ENST00000430617 ARL6IP4Q66PJ3 421 aaKnown RBP11.13□□□□□ -0.63
ATG4B-212ENST00000430617 ADALQ6DHV7 355 aa11.13□□□□□ -0.63
ATG4B-212ENST00000430617 PRSS55Q6UWB4 352 aaPredicted RBP11.13□□□□□ -0.63
ATG4B-212ENST00000430617 Q6ZS52 159 aa11.13□□□□□ -0.63
ATG4B-212ENST00000430617 MRPL10Q7Z7H8 261 aaKnown RBP11.13□□□□□ -0.63
ATG4B-212ENST00000430617 PDZD3Q86UT5 571 aa11.13□□□□□ -0.63
ATG4B-212ENST00000430617 KBTBD6Q86V97 674 aa11.13□□□□□ -0.63
ATG4B-212ENST00000430617 POTEDQ86YR6 584 aa11.13□□□□□ -0.63
ATG4B-212ENST00000430617 ZNF710Q8N1W2 664 aa11.13□□□□□ -0.63
ATG4B-212ENST00000430617 KRI1Q8N9T8 703 aaKnown RBP11.13□□□□□ -0.63
ATG4B-212ENST00000430617 FAM3CQ92520 227 aa11.13□□□□□ -0.63
ATG4B-212ENST00000430617 DNASE1L2Q92874 299 aa11.13□□□□□ -0.63
ATG4B-212ENST00000430617 LENG9Q96B70 501 aa11.13□□□□□ -0.63
ATG4B-212ENST00000430617 MCRS1Q96EZ8 462 aa11.13□□□□□ -0.63
ATG4B-212ENST00000430617 NAP1L4Q99733 375 aaKnown RBP11.13□□□□□ -0.63
ATG4B-212ENST00000430617 GCOM2Q9BZD3 368 aaPredicted RBP11.13□□□□□ -0.63
ATG4B-212ENST00000430617 RBM12Q9NTZ6 932 aaKnown RBP11.13□□□□□ -0.63
ATG4B-212ENST00000430617 MIOSQ9NXC5 875 aa11.13□□□□□ -0.63
ATG4B-212ENST00000430617 DNMT3BQ9UBC3 853 aaKnown RBP11.13□□□□□ -0.63
ATG4B-212ENST00000430617 GPSM3Q9Y4H4 160 aa11.13□□□□□ -0.63
ATG4B-212ENST00000430617 SRPRBQ9Y5M8 271 aaKnown RBP11.13□□□□□ -0.63
ATG4B-212ENST00000430617 PTPRDP23468 1912 aa11.13□□□□□ -0.63
ATG4B-212ENST00000430617 ACACAQ13085 2346 aa11.12□□□□□ -0.63
ATG4B-212ENST00000430617 IGLV3-22A0A075B6J6 115 aa11.12□□□□□ -0.63
ATG4B-212ENST00000430617 C4orf47A7E2U8 309 aa11.12□□□□□ -0.63
ATG4B-212ENST00000430617 FAM86B1E9PN63 330 aa11.12□□□□□ -0.63
ATG4B-212ENST00000430617 LAD1O00515 517 aa11.12□□□□□ -0.63
ATG4B-212ENST00000430617 CCNT1O60563 726 aaKnown RBP11.12□□□□□ -0.63
ATG4B-212ENST00000430617 C8AP07357 584 aa11.12□□□□□ -0.63
ATG4B-212ENST00000430617 HNRNPA1P09651 372 aaKnown RBP eCLIP11.12□□□□□ -0.63
ATG4B-212ENST00000430617 FAM86B2P0C5J1 330 aa11.12□□□□□ -0.63
ATG4B-212ENST00000430617 OR52Z1P0C646 297 aa11.12□□□□□ -0.63
ATG4B-212ENST00000430617 LIG1P18858 919 aa11.12□□□□□ -0.63
ATG4B-212ENST00000430617 FCARP24071 287 aa11.12□□□□□ -0.63
ATG4B-212ENST00000430617 USP11P51784 963 aa11.12□□□□□ -0.63
ATG4B-212ENST00000430617 DSC1Q08554 894 aa11.12□□□□□ -0.63
ATG4B-212ENST00000430617 IL17AQ16552 155 aa11.12□□□□□ -0.63
ATG4B-212ENST00000430617 SKOR2Q2VWA4 1001 aaPredicted RBP11.12□□□□□ -0.63
ATG4B-212ENST00000430617 PPM1LQ5SGD2 360 aa11.12□□□□□ -0.63
ATG4B-212ENST00000430617 UBXN11Q5T124 520 aa11.12□□□□□ -0.63
ATG4B-212ENST00000430617 RESP18Q5W5W9 173 aa11.12□□□□□ -0.63
ATG4B-212ENST00000430617 KIAA1211LQ6NV74 962 aa11.12□□□□□ -0.63
ATG4B-212ENST00000430617 SHC4Q6S5L8 630 aa11.12□□□□□ -0.63
ATG4B-212ENST00000430617 KSR1Q8IVT5 923 aa11.12□□□□□ -0.63
ATG4B-212ENST00000430617 SPEM1Q8N4L4 309 aa11.12□□□□□ -0.63
ATG4B-212ENST00000430617 ZNF579Q8NAF0 562 aaKnown RBP11.12□□□□□ -0.63
ATG4B-212ENST00000430617 RABGGTAQ92696 567 aa11.12□□□□□ -0.63
ATG4B-212ENST00000430617 PGBD4Q96DM1 585 aa11.12□□□□□ -0.63
ATG4B-212ENST00000430617 MTMR9Q96QG7 549 aa11.12□□□□□ -0.63
ATG4B-212ENST00000430617 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.12□□□□□ -0.63
ATG4B-212ENST00000430617 KANSL3Q9P2N6 904 aa11.12□□□□□ -0.63
ATG4B-212ENST00000430617 HPSEQ9Y251 543 aa11.12□□□□□ -0.63
ATG4B-212ENST00000430617 NUP210Q8TEM1 1887 aaPredicted RBP11.12□□□□□ -0.63
ATG4B-212ENST00000430617 ASXL3Q9C0F0 2248 aa11.11□□□□□ -0.63
ATG4B-212ENST00000430617 IPO5O00410 1097 aaKnown RBP11.11□□□□□ -0.63
ATG4B-212ENST00000430617 ADAM12O43184 909 aa11.11□□□□□ -0.63
ATG4B-212ENST00000430617 HYAL3O43820 417 aaPredicted RBP11.11□□□□□ -0.63
ATG4B-212ENST00000430617 PAPSS2O95340 614 aaPredicted RBP11.11□□□□□ -0.63
ATG4B-212ENST00000430617 CAPNS1P04632 268 aa11.11□□□□□ -0.63
ATG4B-212ENST00000430617 SFPQP23246 707 aaKnown RBP eCLIP11.11□□□□□ -0.63
ATG4B-212ENST00000430617 Q4G0T1 1027 aa11.11□□□□□ -0.63
ATG4B-212ENST00000430617 PABPC1LQ4VXU2 614 aaKnown RBP11.11□□□□□ -0.63
ATG4B-212ENST00000430617 RTP2Q5QGT7 225 aa11.11□□□□□ -0.63
ATG4B-212ENST00000430617 FUT10Q6P4F1 479 aa11.11□□□□□ -0.63
ATG4B-212ENST00000430617 CATSPER4Q7RTX7 472 aa11.11□□□□□ -0.63
ATG4B-212ENST00000430617 FSIP1Q8NA03 581 aa11.11□□□□□ -0.63
ATG4B-212ENST00000430617 ENGASEQ8NFI3 743 aa11.11□□□□□ -0.63
ATG4B-212ENST00000430617 ETNPPLQ8TBG4 499 aa11.11□□□□□ -0.63
ATG4B-212ENST00000430617 ADAM32Q8TC27 787 aa11.11□□□□□ -0.63
ATG4B-212ENST00000430617 ELSPBP1Q96BH3 223 aa11.11□□□□□ -0.63
ATG4B-212ENST00000430617 LOXL4Q96JB6 756 aa11.11□□□□□ -0.63
ATG4B-212ENST00000430617 CLIC6Q96NY7 704 aa11.11□□□□□ -0.63
ATG4B-212ENST00000430617 CLSTN3Q9BQT9 956 aa11.11□□□□□ -0.63
ATG4B-212ENST00000430617 BRD9Q9H8M2 597 aa11.11□□□□□ -0.63
ATG4B-212ENST00000430617 KCNMB3Q9NPA1 279 aa11.11□□□□□ -0.63
ATG4B-212ENST00000430617 CACNG4Q9UBN1 327 aa11.11□□□□□ -0.63
ATG4B-212ENST00000430617 DDX25Q9UHL0 483 aaKnown RBP11.11□□□□□ -0.63
ATG4B-212ENST00000430617 KLK13Q9UKR3 277 aa11.11□□□□□ -0.63
ATG4B-212ENST00000430617 PIAS3Q9Y6X2 628 aa11.11□□□□□ -0.63
ATG4B-212ENST00000430617 KALRNO60229 2985 aa11.11□□□□□ -0.63
ATG4B-212ENST00000430617 CNTNAP2Q9UHC6 1331 aa11.1□□□□□ -0.63
ATG4B-212ENST00000430617 ZNF638Q14966 1978 aaKnown RBP11.1□□□□□ -0.63
ATG4B-212ENST00000430617 TMEM150BA6NC51 233 aa11.1□□□□□ -0.63
ATG4B-212ENST00000430617 OATP04181 439 aa11.1□□□□□ -0.63
ATG4B-212ENST00000430617 PFKFB1P16118 471 aa11.1□□□□□ -0.63
ATG4B-212ENST00000430617 CMA1P23946 247 aa11.1□□□□□ -0.63
ATG4B-212ENST00000430617 CCNE1P24864 410 aa11.1□□□□□ -0.63
ATG4B-212ENST00000430617 MPLP40238 635 aa11.1□□□□□ -0.63
ATG4B-212ENST00000430617 PXNP49023 591 aaPredicted RBP11.1□□□□□ -0.63
ATG4B-212ENST00000430617 UGCGQ16739 394 aa11.1□□□□□ -0.63
ATG4B-212ENST00000430617 COL28A1Q2UY09 1125 aa11.1□□□□□ -0.63
ATG4B-212ENST00000430617 USP41Q3LFD5 358 aa11.1□□□□□ -0.63
ATG4B-212ENST00000430617 ZNF746Q6NUN9 644 aaPredicted RBP11.1□□□□□ -0.63
ATG4B-212ENST00000430617 WDR5BQ86VZ2 330 aa11.1□□□□□ -0.63
ATG4B-212ENST00000430617 PLA2G4DQ86XP0 818 aa11.1□□□□□ -0.63
ATG4B-212ENST00000430617 MAP4K3Q8IVH8 894 aa11.1□□□□□ -0.63
ATG4B-212ENST00000430617 FMR1NBQ8N0W7 255 aaPredicted RBP11.1□□□□□ -0.63
ATG4B-212ENST00000430617 SMG8Q8ND04 991 aaKnown RBP11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms