RNA–Protein interactions for RNA: ENST00000430257.1

CBX3P6-201, Transcript of chromobox 3 pseudogene 6, humanhuman

BASIC

Gene CBX3P6, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P6-201ENST00000430257 HYAL1Q12794 435 aa3.25□□□□□ -1.89
CBX3P6-201ENST00000430257 SF3B3Q15393 1217 aaKnown RBP3.25□□□□□ -1.89
CBX3P6-201ENST00000430257 SLC44A4Q53GD3 710 aa3.25□□□□□ -1.89
CBX3P6-201ENST00000430257 CCDC178Q5BJE1 867 aa3.25□□□□□ -1.89
CBX3P6-201ENST00000430257 FOXR2Q6PJQ5 311 aa3.25□□□□□ -1.89
CBX3P6-201ENST00000430257 FGD2Q7Z6J4 655 aa3.25□□□□□ -1.89
CBX3P6-201ENST00000430257 YTHDF3Q7Z739 585 aaKnown RBP3.25□□□□□ -1.89
CBX3P6-201ENST00000430257 STRA8Q7Z7C7 330 aa3.25□□□□□ -1.89
CBX3P6-201ENST00000430257 DDX53Q86TM3 631 aaKnown RBP3.25□□□□□ -1.89
CBX3P6-201ENST00000430257 NIM1KQ8IY84 436 aa3.25□□□□□ -1.89
CBX3P6-201ENST00000430257 KLHL42Q9P2K6 505 aa3.25□□□□□ -1.89
CBX3P6-201ENST00000430257 MTO1Q9Y2Z2 717 aaKnown RBP3.25□□□□□ -1.89
CBX3P6-201ENST00000430257 ST20-MTHFSA0A0A6YYL1 179 aa3.24□□□□□ -1.89
CBX3P6-201ENST00000430257 GSG1L2A8MUP6 293 aa3.24□□□□□ -1.89
CBX3P6-201ENST00000430257 PLD2O14939 933 aa3.24□□□□□ -1.89
CBX3P6-201ENST00000430257 KCNQ2O43526 872 aa3.24□□□□□ -1.89
CBX3P6-201ENST00000430257 PRAMEF4O60810 478 aa3.24□□□□□ -1.89
CBX3P6-201ENST00000430257 ERN1O75460 977 aaKnown RBP3.24□□□□□ -1.89
CBX3P6-201ENST00000430257 RFPL3O75679 317 aa3.24□□□□□ -1.89
CBX3P6-201ENST00000430257 DNAJC8O75937 253 aaPredicted RBP3.24□□□□□ -1.89
CBX3P6-201ENST00000430257 GLRX3O76003 335 aaKnown RBP3.24□□□□□ -1.89
CBX3P6-201ENST00000430257 PFKMP08237 780 aa3.24□□□□□ -1.89
CBX3P6-201ENST00000430257 CKBP12277 381 aa3.24□□□□□ -1.89
CBX3P6-201ENST00000430257 IBSPP21815 317 aaPredicted RBP3.24□□□□□ -1.89
CBX3P6-201ENST00000430257 CERS1P27544 350 aa3.24□□□□□ -1.89
CBX3P6-201ENST00000430257 C19orf54Q5BKX5 351 aa3.24□□□□□ -1.89
CBX3P6-201ENST00000430257 PRAMEF14Q5SWL7 426 aa3.24□□□□□ -1.89
CBX3P6-201ENST00000430257 SUMO4Q6EEV6 95 aa3.24□□□□□ -1.89
CBX3P6-201ENST00000430257 CNNM4Q6P4Q7 775 aa3.24□□□□□ -1.89
CBX3P6-201ENST00000430257 KRT26Q7Z3Y9 468 aa3.24□□□□□ -1.89
CBX3P6-201ENST00000430257 ZZZ3Q8IYH5 903 aa3.24□□□□□ -1.89
CBX3P6-201ENST00000430257 MFSD3Q96ES6 412 aa3.24□□□□□ -1.89
CBX3P6-201ENST00000430257 TARS2Q9BW92 718 aaKnown RBP3.24□□□□□ -1.89
CBX3P6-201ENST00000430257 SPRTNQ9H040 489 aaPredicted RBP3.24□□□□□ -1.89
CBX3P6-201ENST00000430257 TRIM39Q9HCM9 518 aa3.24□□□□□ -1.89
CBX3P6-201ENST00000430257 GPRC5DQ9NZD1 345 aa3.24□□□□□ -1.89
CBX3P6-201ENST00000430257 TCF20Q9UGU0 1960 aaKnown RBP3.23□□□□□ -1.89
CBX3P6-201ENST00000430257 TRGV11A0A075B6L2 103 aa3.23□□□□□ -1.89
CBX3P6-201ENST00000430257 MYMKA6NI61 221 aa3.23□□□□□ -1.89
CBX3P6-201ENST00000430257 KRTAP9-6A8MVA2 160 aa3.23□□□□□ -1.89
CBX3P6-201ENST00000430257 CXorf49A8MYA2 514 aaPredicted RBP3.23□□□□□ -1.89
CBX3P6-201ENST00000430257 PDE8AO60658 829 aa3.23□□□□□ -1.89
CBX3P6-201ENST00000430257 GASTP01350 101 aa3.23□□□□□ -1.89
CBX3P6-201ENST00000430257 SNRPA1P09661 255 aaKnown RBP3.23□□□□□ -1.89
CBX3P6-201ENST00000430257 GCSHP23434 173 aa3.23□□□□□ -1.89
CBX3P6-201ENST00000430257 MPGP29372 298 aa3.23□□□□□ -1.89
CBX3P6-201ENST00000430257 ZNF460Q14592 562 aa3.23□□□□□ -1.89
CBX3P6-201ENST00000430257 PCBP1Q15365 356 aaKnown RBP eCLIP3.23□□□□□ -1.89
CBX3P6-201ENST00000430257 NBPF8Q3BBV2 869 aa3.23□□□□□ -1.89
CBX3P6-201ENST00000430257 PLEKHG6Q3KR16 790 aa3.23□□□□□ -1.89
CBX3P6-201ENST00000430257 TMEM119Q4V9L6 283 aa3.23□□□□□ -1.89
CBX3P6-201ENST00000430257 FNDC3BQ53EP0 1204 aaKnown RBP3.23□□□□□ -1.89
CBX3P6-201ENST00000430257 ZC3H12BQ5HYM0 836 aaKnown RBP3.23□□□□□ -1.89
CBX3P6-201ENST00000430257 FAM47AQ5JRC9 791 aa3.23□□□□□ -1.89
CBX3P6-201ENST00000430257 VWA1Q6PCB0 445 aa3.23□□□□□ -1.89
CBX3P6-201ENST00000430257 Q6ZTC4 211 aa3.23□□□□□ -1.89
CBX3P6-201ENST00000430257 LHFPL2Q6ZUX7 228 aa3.23□□□□□ -1.89
CBX3P6-201ENST00000430257 RNF180Q86T96 592 aa3.23□□□□□ -1.89
CBX3P6-201ENST00000430257 DDX42Q86XP3 938 aaKnown RBP eCLIP3.23□□□□□ -1.89
CBX3P6-201ENST00000430257 KRT73Q86Y46 540 aa3.23□□□□□ -1.89
CBX3P6-201ENST00000430257 GLB1L2Q8IW92 636 aa3.23□□□□□ -1.89
CBX3P6-201ENST00000430257 KRT78Q8N1N4 520 aa3.23□□□□□ -1.89
CBX3P6-201ENST00000430257 SYNPOQ8N3V7 929 aa3.23□□□□□ -1.89
CBX3P6-201ENST00000430257 PRPF38AQ8NAV1 312 aaKnown RBP3.23□□□□□ -1.89
CBX3P6-201ENST00000430257 ZCRB1Q8TBF4 217 aaKnown RBP3.23□□□□□ -1.89
CBX3P6-201ENST00000430257 SNX33Q8WV41 574 aa3.23□□□□□ -1.89
CBX3P6-201ENST00000430257 TFAP2BQ92481 460 aa3.23□□□□□ -1.89
CBX3P6-201ENST00000430257 MARK4Q96L34 752 aa3.23□□□□□ -1.89
CBX3P6-201ENST00000430257 CABP5Q9NP86 173 aa3.23□□□□□ -1.89
CBX3P6-201ENST00000430257 TOMM22Q9NS69 142 aa3.23□□□□□ -1.89
CBX3P6-201ENST00000430257 DDX56Q9NY93 547 aaKnown RBP3.23□□□□□ -1.89
CBX3P6-201ENST00000430257 SAMD15Q9P1V8 674 aa3.23□□□□□ -1.89
CBX3P6-201ENST00000430257 PLAAQ9Y263 795 aa3.23□□□□□ -1.89
CBX3P6-201ENST00000430257 PNPLA7Q6ZV29 1317 aa3.22□□□□□ -1.89
CBX3P6-201ENST00000430257 CCDC163A0A0D9SF12 145 aa3.22□□□□□ -1.89
CBX3P6-201ENST00000430257 KRT86O43790 486 aa3.22□□□□□ -1.89
CBX3P6-201ENST00000430257 MARCH6O60337 910 aa3.22□□□□□ -1.89
CBX3P6-201ENST00000430257 CNGA1P29973 690 aa3.22□□□□□ -1.89
CBX3P6-201ENST00000430257 MMP13P45452 471 aa3.22□□□□□ -1.89
CBX3P6-201ENST00000430257 PLCD1P51178 756 aa3.22□□□□□ -1.89
CBX3P6-201ENST00000430257 RAP2BP61225 183 aa3.22□□□□□ -1.89
CBX3P6-201ENST00000430257 MEF2AQ02078 507 aaPredicted RBP3.22□□□□□ -1.89
CBX3P6-201ENST00000430257 FAM50AQ14320 339 aaKnown RBP3.22□□□□□ -1.89
CBX3P6-201ENST00000430257 KRT81Q14533 505 aa3.22□□□□□ -1.89
CBX3P6-201ENST00000430257 FAM153CQ494X1 144 aa3.22□□□□□ -1.89
CBX3P6-201ENST00000430257 SLC18B1Q6NT16 456 aa3.22□□□□□ -1.89
CBX3P6-201ENST00000430257 ZCCHC8Q6NZY4 707 aaKnown RBP3.22□□□□□ -1.89
CBX3P6-201ENST00000430257 ABHD15Q6UXT9 468 aa3.22□□□□□ -1.89
CBX3P6-201ENST00000430257 LRRTM3Q86VH5 581 aa3.22□□□□□ -1.89
CBX3P6-201ENST00000430257 RAVER1Q8IY67 606 aaKnown RBP3.22□□□□□ -1.89
CBX3P6-201ENST00000430257 FBXL20Q96IG2 436 aa3.22□□□□□ -1.89
CBX3P6-201ENST00000430257 QTRT1Q9BXR0 403 aaKnown RBP3.22□□□□□ -1.89
CBX3P6-201ENST00000430257 MRPL4Q9BYD3 311 aaKnown RBP3.22□□□□□ -1.89
CBX3P6-201ENST00000430257 USP25Q9UHP3 1055 aa3.22□□□□□ -1.89
CBX3P6-201ENST00000430257 PADI4Q9UM07 663 aa3.22□□□□□ -1.89
CBX3P6-201ENST00000430257 G3BP2Q9UN86 482 aaKnown RBP3.22□□□□□ -1.89
CBX3P6-201ENST00000430257 ATP8A1Q9Y2Q0 1164 aa3.22□□□□□ -1.89
CBX3P6-201ENST00000430257 SPO11Q9Y5K1 396 aa3.22□□□□□ -1.89
CBX3P6-201ENST00000430257 PARNO95453 639 aaKnown RBP3.21□□□□□ -1.9
CBX3P6-201ENST00000430257 MT3P25713 68 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms