RNA–Protein interactions for RNA: ENST00000429774.6

ATXN3-204, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 6,713 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-204ENST00000429774 ANKRD23Q86SG2 305 aa7.53□□□□□ -1.2
ATXN3-204ENST00000429774 VPS52Q8N1B4 723 aa7.53□□□□□ -1.2
ATXN3-204ENST00000429774 DCLK2Q8N568 766 aa7.53□□□□□ -1.2
ATXN3-204ENST00000429774 GBP7Q8N8V2 638 aaPredicted RBP7.53□□□□□ -1.2
ATXN3-204ENST00000429774 ARHGEF2Q92974 986 aaKnown RBP7.53□□□□□ -1.2
ATXN3-204ENST00000429774 RAB3IPQ96QF0 476 aaPredicted RBP7.53□□□□□ -1.2
ATXN3-204ENST00000429774 PARVAQ9NVD7 372 aa7.53□□□□□ -1.2
ATXN3-204ENST00000429774 DNAJC17Q9NVM6 304 aaKnown RBP7.53□□□□□ -1.2
ATXN3-204ENST00000429774 APEX2Q9UBZ4 518 aa7.53□□□□□ -1.2
ATXN3-204ENST00000429774 IP6K2Q9UHH9 426 aa7.53□□□□□ -1.2
ATXN3-204ENST00000429774 EFCAB8A8MWE9 144 aa7.53□□□□□ -1.2
ATXN3-204ENST00000429774 GAS2O43903 313 aaKnown RBP7.53□□□□□ -1.2
ATXN3-204ENST00000429774 B3GAT3O94766 335 aa7.53□□□□□ -1.2
ATXN3-204ENST00000429774 APOEP02649 317 aa7.53□□□□□ -1.2
ATXN3-204ENST00000429774 CTNNA1P35221 906 aaKnown RBP7.53□□□□□ -1.2
ATXN3-204ENST00000429774 NTRK3Q16288 839 aa7.53□□□□□ -1.2
ATXN3-204ENST00000429774 CYP4A22Q5TCH4 519 aa7.53□□□□□ -1.2
ATXN3-204ENST00000429774 TMEM169Q96HH4 297 aa7.53□□□□□ -1.2
ATXN3-204ENST00000429774 PDGFCQ9NRA1 345 aa7.53□□□□□ -1.2
ATXN3-204ENST00000429774 SH3BP1Q9Y3L3 701 aa7.53□□□□□ -1.2
ATXN3-204ENST00000429774 PCDHB12Q9Y5F1 795 aa7.53□□□□□ -1.2
ATXN3-204ENST00000429774 SLC15A5A6NIM6 579 aa7.53□□□□□ -1.2
ATXN3-204ENST00000429774 GOLGA8MH3BSY2 632 aa7.53□□□□□ -1.2
ATXN3-204ENST00000429774 CYB561D2O14569 222 aa7.53□□□□□ -1.2
ATXN3-204ENST00000429774 TJP3O95049 919 aa7.53□□□□□ -1.2
ATXN3-204ENST00000429774 LGALS2P05162 132 aa7.53□□□□□ -1.2
ATXN3-204ENST00000429774 KRT10P13645 584 aa7.53□□□□□ -1.2
ATXN3-204ENST00000429774 TCP1P17987 556 aaKnown RBP7.53□□□□□ -1.2
ATXN3-204ENST00000429774 LMNB2Q03252 620 aa7.53□□□□□ -1.2
ATXN3-204ENST00000429774 DEPDC1BQ8WUY9 529 aa7.53□□□□□ -1.2
ATXN3-204ENST00000429774 ATP2A3Q93084 1043 aa7.53□□□□□ -1.2
ATXN3-204ENST00000429774 MKL1Q969V6 931 aa7.53□□□□□ -1.2
ATXN3-204ENST00000429774 APBA2Q99767 749 aa7.53□□□□□ -1.2
ATXN3-204ENST00000429774 TSPYL2Q9H2G4 693 aaPredicted RBP7.53□□□□□ -1.2
ATXN3-204ENST00000429774 PACSIN2Q9UNF0 486 aaPredicted RBP7.53□□□□□ -1.2
ATXN3-204ENST00000429774 KIAA0391O15091 583 aaKnown RBP7.52□□□□□ -1.2
ATXN3-204ENST00000429774 SMIM10L2AP0DMW4 78 aa7.52□□□□□ -1.2
ATXN3-204ENST00000429774 SMIM10L2BP0DMW5 78 aa7.52□□□□□ -1.2
ATXN3-204ENST00000429774 EPC2Q52LR7 807 aa7.52□□□□□ -1.2
ATXN3-204ENST00000429774 SPRYD7Q5W111 196 aa7.52□□□□□ -1.2
ATXN3-204ENST00000429774 OTOP1Q7RTM1 612 aa7.52□□□□□ -1.2
ATXN3-204ENST00000429774 PGBD3Q8N328 593 aa7.52□□□□□ -1.2
ATXN3-204ENST00000429774 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.52□□□□□ -1.2
ATXN3-204ENST00000429774 MORC4Q8TE76 937 aa7.52□□□□□ -1.2
ATXN3-204ENST00000429774 SH3GL3Q99963 347 aa7.52□□□□□ -1.2
ATXN3-204ENST00000429774 FSD1LQ9BXM9 530 aa7.52□□□□□ -1.2
ATXN3-204ENST00000429774 KLHL8Q9P2G9 620 aaPredicted RBP7.52□□□□□ -1.2
ATXN3-204ENST00000429774 ECEL1O95672 775 aa7.52□□□□□ -1.21
ATXN3-204ENST00000429774 S100BP04271 92 aaPredicted RBP7.52□□□□□ -1.21
ATXN3-204ENST00000429774 THP07101 528 aa7.52□□□□□ -1.21
ATXN3-204ENST00000429774 TGFB3P10600 412 aa7.52□□□□□ -1.21
ATXN3-204ENST00000429774 TAF6P49848 677 aa7.52□□□□□ -1.21
ATXN3-204ENST00000429774 CDK17Q00537 523 aa7.52□□□□□ -1.21
ATXN3-204ENST00000429774 TMED1Q13445 227 aa7.52□□□□□ -1.21
ATXN3-204ENST00000429774 KIAA1755Q5JYT7 1200 aa7.52□□□□□ -1.21
ATXN3-204ENST00000429774 RBBP8NLQ8NC74 664 aaPredicted RBP7.52□□□□□ -1.21
ATXN3-204ENST00000429774 BCAS4Q8TDM0 211 aa7.52□□□□□ -1.21
ATXN3-204ENST00000429774 FAN1Q9Y2M0 1017 aa7.52□□□□□ -1.21
ATXN3-204ENST00000429774 NUP188Q5SRE5 1749 aa7.52□□□□□ -1.21
ATXN3-204ENST00000429774 GTF2H1P32780 548 aa7.52□□□□□ -1.21
ATXN3-204ENST00000429774 GARSP41250 739 aaKnown RBP7.52□□□□□ -1.21
ATXN3-204ENST00000429774 ZNF211Q13398 564 aaPredicted RBP7.52□□□□□ -1.21
ATXN3-204ENST00000429774 EFHC2Q5JST6 749 aa7.52□□□□□ -1.21
ATXN3-204ENST00000429774 ENOSF1Q7L5Y1 443 aa7.52□□□□□ -1.21
ATXN3-204ENST00000429774 STKLD1Q8NE28 680 aa7.52□□□□□ -1.21
ATXN3-204ENST00000429774 RABGGTAQ92696 567 aa7.52□□□□□ -1.21
ATXN3-204ENST00000429774 KCNB2Q92953 911 aa7.52□□□□□ -1.21
ATXN3-204ENST00000429774 BAZ2AQ9UIF9 1905 aaKnown RBP7.52□□□□□ -1.21
ATXN3-204ENST00000429774 RWDD2BP57060 319 aa7.52□□□□□ -1.21
ATXN3-204ENST00000429774 TDRD10Q5VZ19 366 aaKnown RBP7.52□□□□□ -1.21
ATXN3-204ENST00000429774 NXNQ6DKJ4 435 aa7.52□□□□□ -1.21
ATXN3-204ENST00000429774 SH3BP5LQ7L8J4 393 aa7.52□□□□□ -1.21
ATXN3-204ENST00000429774 AFAP1L2Q8N4X5 818 aa7.52□□□□□ -1.21
ATXN3-204ENST00000429774 P3H4Q92791 437 aa7.52□□□□□ -1.21
ATXN3-204ENST00000429774 ZMAT2Q96NC0 199 aaKnown RBP7.52□□□□□ -1.21
ATXN3-204ENST00000429774 WDR18Q9BV38 432 aa7.52□□□□□ -1.21
ATXN3-204ENST00000429774 NT5C1AQ9BXI3 368 aa7.52□□□□□ -1.21
ATXN3-204ENST00000429774 MUC3BQ9H195 1237 aa7.52□□□□□ -1.21
ATXN3-204ENST00000429774 TMEM8AQ9HCN3 771 aa7.52□□□□□ -1.21
ATXN3-204ENST00000429774 STAP1Q9ULZ2 295 aa7.52□□□□□ -1.21
ATXN3-204ENST00000429774 NWD2Q9ULI1 1742 aa7.52□□□□□ -1.21
ATXN3-204ENST00000429774 NCK2O43639 380 aa7.52□□□□□ -1.21
ATXN3-204ENST00000429774 CYBBP04839 570 aa7.52□□□□□ -1.21
ATXN3-204ENST00000429774 ALDH2P05091 517 aa7.52□□□□□ -1.21
ATXN3-204ENST00000429774 IGFBP4P22692 258 aa7.52□□□□□ -1.21
ATXN3-204ENST00000429774 RFC1P35251 1148 aaPredicted RBP7.52□□□□□ -1.21
ATXN3-204ENST00000429774 ADCY1Q08828 1119 aa7.52□□□□□ -1.21
ATXN3-204ENST00000429774 SNX17Q15036 470 aa7.52□□□□□ -1.21
ATXN3-204ENST00000429774 FYB2Q5VWT5 728 aa7.52□□□□□ -1.21
ATXN3-204ENST00000429774 DCP1BQ8IZD4 617 aaKnown RBP7.52□□□□□ -1.21
ATXN3-204ENST00000429774 ADSSL1Q8N142 457 aa7.52□□□□□ -1.21
ATXN3-204ENST00000429774 ATP8B4Q8TF62 1192 aa7.52□□□□□ -1.21
ATXN3-204ENST00000429774 SLC5A5Q92911 643 aa7.52□□□□□ -1.21
ATXN3-204ENST00000429774 PBKQ96KB5 322 aa7.52□□□□□ -1.21
ATXN3-204ENST00000429774 MCEEQ96PE7 176 aa7.52□□□□□ -1.21
ATXN3-204ENST00000429774 VCX3BQ9H321 246 aa7.52□□□□□ -1.21
ATXN3-204ENST00000429774 TIMM13Q9Y5L4 95 aaPredicted RBP7.52□□□□□ -1.21
ATXN3-204ENST00000429774 H7C4K7 107 aa7.52□□□□□ -1.21
ATXN3-204ENST00000429774 OPHN1O60890 802 aa7.52□□□□□ -1.21
ATXN3-204ENST00000429774 POLE2P56282 527 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms