RNA–Protein interactions for RNA: ENST00000429746.1

CTSD-203, Transcript of cathepsin D, humanhuman

TSL 3

Gene CTSD, Length 690 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-203ENST00000429746 KLHL5Q96PQ7 755 aa18.95■□□□□ 0.62
CTSD-203ENST00000429746 CDCA3Q99618 268 aaPredicted RBP18.95■□□□□ 0.62
CTSD-203ENST00000429746 GZF1Q9H116 711 aaPredicted RBP18.95■□□□□ 0.62
CTSD-203ENST00000429746 BARX2Q9UMQ3 279 aaPredicted RBP18.95■□□□□ 0.62
CTSD-203ENST00000429746 EXOC7Q9UPT5 735 aa18.95■□□□□ 0.62
CTSD-203ENST00000429746 UBE4BO95155 1302 aa18.95■□□□□ 0.62
CTSD-203ENST00000429746 MTCL1Q9Y4B5 1905 aaKnown RBP18.94■□□□□ 0.62
CTSD-203ENST00000429746 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.94■□□□□ 0.62
CTSD-203ENST00000429746 PODXLO00592 558 aa18.94■□□□□ 0.62
CTSD-203ENST00000429746 NR1I2O75469 434 aa18.94■□□□□ 0.62
CTSD-203ENST00000429746 RHOBTB3O94955 611 aa18.94■□□□□ 0.62
CTSD-203ENST00000429746 RPN1P04843 607 aaKnown RBP18.94■□□□□ 0.62
CTSD-203ENST00000429746 IL9P15248 144 aa18.94■□□□□ 0.62
CTSD-203ENST00000429746 FGFR3P22607 806 aa18.94■□□□□ 0.62
CTSD-203ENST00000429746 BRCC3P46736 316 aa18.94■□□□□ 0.62
CTSD-203ENST00000429746 FAM160A1Q05DH4 1040 aa18.94■□□□□ 0.62
CTSD-203ENST00000429746 JADE1Q6IE81 842 aa18.94■□□□□ 0.62
CTSD-203ENST00000429746 DCLRE1AQ6PJP8 1040 aa18.94■□□□□ 0.62
CTSD-203ENST00000429746 BRSK2Q8IWQ3 736 aa18.94■□□□□ 0.62
CTSD-203ENST00000429746 GPR65Q8IYL9 337 aa18.94■□□□□ 0.62
CTSD-203ENST00000429746 GJD3Q8N144 294 aa18.94■□□□□ 0.62
CTSD-203ENST00000429746 CXorf38Q8TB03 319 aa18.94■□□□□ 0.62
CTSD-203ENST00000429746 SPATA20Q8TB22 786 aa18.94■□□□□ 0.62
CTSD-203ENST00000429746 FAM84AQ96KN4 292 aa18.94■□□□□ 0.62
CTSD-203ENST00000429746 KCTD10Q9H3F6 313 aa18.94■□□□□ 0.62
CTSD-203ENST00000429746 RPF1Q9H9Y2 349 aaKnown RBP18.94■□□□□ 0.62
CTSD-203ENST00000429746 AGPAT3Q9NRZ7 376 aa18.94■□□□□ 0.62
CTSD-203ENST00000429746 SLC38A7Q9NVC3 462 aa18.94■□□□□ 0.62
CTSD-203ENST00000429746 STK39Q9UEW8 545 aa18.94■□□□□ 0.62
CTSD-203ENST00000429746 HCFC2Q9Y5Z7 792 aa18.94■□□□□ 0.62
CTSD-203ENST00000429746 SF3B1O75533 1304 aaKnown RBP eCLIP18.94■□□□□ 0.625e-10■■■■■ 156.5
CTSD-203ENST00000429746 I3L4J1 428 aa18.93■□□□□ 0.62
CTSD-203ENST00000429746 CYP3A5P20815 502 aa18.93■□□□□ 0.62
CTSD-203ENST00000429746 GLUD2P49448 558 aa18.93■□□□□ 0.62
CTSD-203ENST00000429746 AARSP49588 968 aaKnown RBP eCLIP18.93■□□□□ 0.62
CTSD-203ENST00000429746 PPP2R3AQ06190 1150 aa18.93■□□□□ 0.62
CTSD-203ENST00000429746 POSTNQ15063 836 aa18.93■□□□□ 0.62
CTSD-203ENST00000429746 SMAD2Q15796 467 aaKnown RBP18.93■□□□□ 0.62
CTSD-203ENST00000429746 SPATA1Q5VX52 437 aa18.93■□□□□ 0.62
CTSD-203ENST00000429746 SYCE2Q6PIF2 218 aa18.93■□□□□ 0.62
CTSD-203ENST00000429746 LNX1Q8TBB1 728 aaPredicted RBP18.93■□□□□ 0.62
CTSD-203ENST00000429746 KIF12Q96FN5 646 aa18.93■□□□□ 0.62
CTSD-203ENST00000429746 S1PR5Q9H228 398 aa18.93■□□□□ 0.62
CTSD-203ENST00000429746 PCIF1Q9H4Z3 704 aa18.93■□□□□ 0.62
CTSD-203ENST00000429746 ASB7Q9H672 318 aa18.93■□□□□ 0.62
CTSD-203ENST00000429746 GOLGA8IPA6NC78 632 aa18.92■□□□□ 0.62
CTSD-203ENST00000429746 GOLGA8JA6NMD2 632 aa18.92■□□□□ 0.62
CTSD-203ENST00000429746 PI4K2BG5E9Z4 385 aa18.92■□□□□ 0.62
CTSD-203ENST00000429746 TEX28O15482 410 aa18.92■□□□□ 0.62
CTSD-203ENST00000429746 EXTL3O43909 919 aa18.92■□□□□ 0.62
CTSD-203ENST00000429746 TADA2AO75478 443 aa18.92■□□□□ 0.62
CTSD-203ENST00000429746 B3GAT3O94766 335 aa18.92■□□□□ 0.62
CTSD-203ENST00000429746 EPCAMP16422 314 aa18.92■□□□□ 0.62
CTSD-203ENST00000429746 RPL9P32969 192 aaKnown RBP18.92■□□□□ 0.62
CTSD-203ENST00000429746 CLCN4P51793 760 aa18.92■□□□□ 0.62
CTSD-203ENST00000429746 SMAD4Q13485 552 aaKnown RBP18.92■□□□□ 0.62
CTSD-203ENST00000429746 PNOCQ13519 176 aa18.92■□□□□ 0.62
CTSD-203ENST00000429746 USP41Q3LFD5 358 aa18.92■□□□□ 0.62
CTSD-203ENST00000429746 PRSS55Q6UWB4 352 aaPredicted RBP18.92■□□□□ 0.62
CTSD-203ENST00000429746 RSPO2Q6UXX9 243 aaPredicted RBP18.92■□□□□ 0.62
CTSD-203ENST00000429746 CLEC17AQ6ZS10 378 aa18.92■□□□□ 0.62
CTSD-203ENST00000429746 NELFCDQ8IXH7 590 aa18.92■□□□□ 0.62
CTSD-203ENST00000429746 C12orf56Q8IXR9 622 aa18.92■□□□□ 0.62
CTSD-203ENST00000429746 SMRP1Q8NCR6 262 aa18.92■□□□□ 0.62
CTSD-203ENST00000429746 TMEM174Q8WUU8 243 aa18.92■□□□□ 0.62
CTSD-203ENST00000429746 PIK3R5Q8WYR1 880 aa18.92■□□□□ 0.62
CTSD-203ENST00000429746 DDX27Q96GQ7 796 aaKnown RBP18.92■□□□□ 0.62
CTSD-203ENST00000429746 POP1Q99575 1024 aaKnown RBP18.92■□□□□ 0.62
CTSD-203ENST00000429746 FAM213AQ9BRX8 229 aa18.92■□□□□ 0.62
CTSD-203ENST00000429746 CD207Q9UJ71 328 aa18.92■□□□□ 0.62
CTSD-203ENST00000429746 UBQLN1Q9UMX0 589 aaKnown RBP18.92■□□□□ 0.62
CTSD-203ENST00000429746 DERAQ9Y315 318 aa18.92■□□□□ 0.62
CTSD-203ENST00000429746 PTPRJQ12913 1337 aa18.92■□□□□ 0.62
CTSD-203ENST00000429746 C2orf16Q68DN1 1984 aa18.92■□□□□ 0.62
CTSD-203ENST00000429746 DENND4AQ7Z401 1863 aa18.91■□□□□ 0.62
CTSD-203ENST00000429746 ANO9A1A5B4 782 aa18.91■□□□□ 0.62
CTSD-203ENST00000429746 C2CD2LO14523 706 aa18.91■□□□□ 0.62
CTSD-203ENST00000429746 ADAM12O43184 909 aa18.91■□□□□ 0.62
CTSD-203ENST00000429746 MBTPS2O43462 519 aa18.91■□□□□ 0.62
CTSD-203ENST00000429746 URODP06132 367 aa18.91■□□□□ 0.62
CTSD-203ENST00000429746 TKTP29401 623 aaKnown RBP18.91■□□□□ 0.62
CTSD-203ENST00000429746 PSMD2Q13200 908 aa18.91■□□□□ 0.62
CTSD-203ENST00000429746 KCNB1Q14721 858 aa18.91■□□□□ 0.62
CTSD-203ENST00000429746 KNOP1Q1ED39 458 aaKnown RBP18.91■□□□□ 0.62
CTSD-203ENST00000429746 FAM171A1Q5VUB5 890 aa18.91■□□□□ 0.62
CTSD-203ENST00000429746 CBWD2Q8IUF1 395 aa18.91■□□□□ 0.62
CTSD-203ENST00000429746 ADHFE1Q8IWW8 467 aa18.91■□□□□ 0.62
CTSD-203ENST00000429746 CD302Q8IX05 232 aa18.91■□□□□ 0.62
CTSD-203ENST00000429746 SYCP3Q8IZU3 236 aa18.91■□□□□ 0.62
CTSD-203ENST00000429746 TIGD1Q96MW7 591 aa18.91■□□□□ 0.62
CTSD-203ENST00000429746 TSPAN18Q96SJ8 248 aa18.91■□□□□ 0.62
CTSD-203ENST00000429746 CLSTN3Q9BQT9 956 aa18.91■□□□□ 0.62
CTSD-203ENST00000429746 MRPL17Q9NRX2 175 aaKnown RBP18.91■□□□□ 0.62
CTSD-203ENST00000429746 EXOC1Q9NV70 894 aa18.91■□□□□ 0.62
CTSD-203ENST00000429746 HSPBP1Q9NZL4 362 aa18.91■□□□□ 0.62
CTSD-203ENST00000429746 C2CD2Q9Y426 696 aa18.91■□□□□ 0.62
CTSD-203ENST00000429746 C19orf67A6NJJ6 358 aa18.9■□□□□ 0.62
CTSD-203ENST00000429746 PIRO00625 290 aa18.9■□□□□ 0.62
CTSD-203ENST00000429746 CLIC2O15247 247 aa18.9■□□□□ 0.62
CTSD-203ENST00000429746 SPTLC1O15269 473 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms