RNA–Protein interactions for RNA: ENST00000429662.6

GABPB1-205, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-205ENST00000429662 COG2Q14746 738 aa9.31□□□□□ -0.92
GABPB1-205ENST00000429662 MFSD5Q6N075 450 aa9.31□□□□□ -0.92
GABPB1-205ENST00000429662 C17orf99Q6UX52 265 aa9.31□□□□□ -0.92
GABPB1-205ENST00000429662 MTMR14Q8NCE2 650 aa9.31□□□□□ -0.92
GABPB1-205ENST00000429662 CCDC197Q8NCU1 140 aa9.31□□□□□ -0.92
GABPB1-205ENST00000429662 BBOF1Q8ND07 529 aa9.31□□□□□ -0.92
GABPB1-205ENST00000429662 RDM1Q8NG50 284 aa9.31□□□□□ -0.92
GABPB1-205ENST00000429662 IPO4Q8TEX9 1081 aaKnown RBP9.31□□□□□ -0.92
GABPB1-205ENST00000429662 GRK7Q8WTQ7 553 aa9.31□□□□□ -0.92
GABPB1-205ENST00000429662 KAT2BQ92831 832 aa9.31□□□□□ -0.92
GABPB1-205ENST00000429662 CD101Q93033 1021 aa9.31□□□□□ -0.92
GABPB1-205ENST00000429662 TEPSINQ96N21 525 aa9.31□□□□□ -0.92
GABPB1-205ENST00000429662 PLCD4Q9BRC7 762 aa9.31□□□□□ -0.92
GABPB1-205ENST00000429662 TRIM51Q9BSJ1 452 aa9.31□□□□□ -0.92
GABPB1-205ENST00000429662 RABEP2Q9H5N1 569 aa9.31□□□□□ -0.92
GABPB1-205ENST00000429662 LRRC19Q9H756 370 aa9.31□□□□□ -0.92
GABPB1-205ENST00000429662 C17orf75Q9HAS0 396 aa9.31□□□□□ -0.92
GABPB1-205ENST00000429662 ANKEF1Q9NU02 776 aa9.31□□□□□ -0.92
GABPB1-205ENST00000429662 WHRNQ9P202 907 aa9.31□□□□□ -0.92
GABPB1-205ENST00000429662 SRRDQ9UH36 339 aa9.31□□□□□ -0.92
GABPB1-205ENST00000429662 RABGEF1Q9UJ41 708 aa9.31□□□□□ -0.92
GABPB1-205ENST00000429662 COG5Q9UP83 839 aa9.31□□□□□ -0.92
GABPB1-205ENST00000429662 SIPA1L1O43166 1804 aa9.31□□□□□ -0.92
GABPB1-205ENST00000429662 CHD7Q9P2D1 2997 aa9.31□□□□□ -0.92
GABPB1-205ENST00000429662 IGSF9BQ9UPX0 1349 aa9.31□□□□□ -0.92
GABPB1-205ENST00000429662 PTPRFP10586 1907 aa9.3□□□□□ -0.92
GABPB1-205ENST00000429662 LOXHD1Q8IVV2 1947 aa9.3□□□□□ -0.92
GABPB1-205ENST00000429662 H0YCG3 227 aa9.3□□□□□ -0.92
GABPB1-205ENST00000429662 RASSF9O75901 435 aa9.3□□□□□ -0.92
GABPB1-205ENST00000429662 DNAJC8O75937 253 aaPredicted RBP9.3□□□□□ -0.92
GABPB1-205ENST00000429662 ARP10275 920 aa9.3□□□□□ -0.92
GABPB1-205ENST00000429662 ITIH2P19823 946 aa9.3□□□□□ -0.92
GABPB1-205ENST00000429662 COMTP21964 271 aa9.3□□□□□ -0.92
GABPB1-205ENST00000429662 OSBPP22059 807 aa9.3□□□□□ -0.92
GABPB1-205ENST00000429662 SFNP31947 248 aa9.3□□□□□ -0.92
GABPB1-205ENST00000429662 RDXP35241 583 aaKnown RBP9.3□□□□□ -0.92
GABPB1-205ENST00000429662 QARSP47897 775 aaKnown RBP9.3□□□□□ -0.92
GABPB1-205ENST00000429662 GPC3P51654 580 aa9.3□□□□□ -0.92
GABPB1-205ENST00000429662 JAK3P52333 1124 aa9.3□□□□□ -0.92
GABPB1-205ENST00000429662 PLTPP55058 493 aa9.3□□□□□ -0.92
GABPB1-205ENST00000429662 NCKAP1LP55160 1127 aa9.3□□□□□ -0.92
GABPB1-205ENST00000429662 LMNB2Q03252 620 aa9.3□□□□□ -0.92
GABPB1-205ENST00000429662 KRT39Q6A163 491 aa9.3□□□□□ -0.92
GABPB1-205ENST00000429662 XRRA1Q6P2D8 792 aa9.3□□□□□ -0.92
GABPB1-205ENST00000429662 CCDC137Q6PK04 289 aaKnown RBP9.3□□□□□ -0.92
GABPB1-205ENST00000429662 ZDHHC24Q6UX98 284 aa9.3□□□□□ -0.92
GABPB1-205ENST00000429662 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.3□□□□□ -0.92
GABPB1-205ENST00000429662 ZNF677Q86XU0 584 aa9.3□□□□□ -0.92
GABPB1-205ENST00000429662 SLC13A5Q86YT5 568 aaPredicted RBP9.3□□□□□ -0.92
GABPB1-205ENST00000429662 C4orf19Q8IY42 314 aa9.3□□□□□ -0.92
GABPB1-205ENST00000429662 CCDC13Q8IYE1 715 aa9.3□□□□□ -0.92
GABPB1-205ENST00000429662 DAW1Q8N136 415 aa9.3□□□□□ -0.92
GABPB1-205ENST00000429662 PRELID2Q8N945 189 aa9.3□□□□□ -0.92
GABPB1-205ENST00000429662 DIS3LQ8TF46 1054 aaKnown RBP9.3□□□□□ -0.92
GABPB1-205ENST00000429662 SHC3Q92529 594 aa9.3□□□□□ -0.92
GABPB1-205ENST00000429662 ALG3Q92685 438 aa9.3□□□□□ -0.92
GABPB1-205ENST00000429662 ART4Q93070 314 aa9.3□□□□□ -0.92
GABPB1-205ENST00000429662 FOXP3Q9BZS1 431 aa9.3□□□□□ -0.92
GABPB1-205ENST00000429662 UNC93B1Q9H1C4 597 aa9.3□□□□□ -0.92
GABPB1-205ENST00000429662 TDRD3Q9H7E2 651 aaKnown RBP9.3□□□□□ -0.92
GABPB1-205ENST00000429662 ELP3Q9H9T3 547 aa9.3□□□□□ -0.92
GABPB1-205ENST00000429662 TMEM8AQ9HCN3 771 aa9.3□□□□□ -0.92
GABPB1-205ENST00000429662 KLC4Q9NSK0 619 aa9.3□□□□□ -0.92
GABPB1-205ENST00000429662 GINM1Q9NU53 330 aa9.3□□□□□ -0.92
GABPB1-205ENST00000429662 GRHL1Q9NZI5 618 aa9.3□□□□□ -0.92
GABPB1-205ENST00000429662 HSPBP1Q9NZL4 362 aa9.3□□□□□ -0.92
GABPB1-205ENST00000429662 SAMD15Q9P1V8 674 aa9.3□□□□□ -0.92
GABPB1-205ENST00000429662 CNOT8Q9UFF9 292 aaKnown RBP9.3□□□□□ -0.92
GABPB1-205ENST00000429662 TCEAL9Q9UHQ7 104 aa9.3□□□□□ -0.92
GABPB1-205ENST00000429662 ZBTB21Q9ULJ3 1066 aa9.3□□□□□ -0.92
GABPB1-205ENST00000429662 SNX24Q9Y343 169 aa9.3□□□□□ -0.92
GABPB1-205ENST00000429662 COQ4Q9Y3A0 265 aa9.3□□□□□ -0.92
GABPB1-205ENST00000429662 PPP2R3BQ9Y5P8 575 aa9.3□□□□□ -0.92
GABPB1-205ENST00000429662 UBIAD1Q9Y5Z9 338 aa9.3□□□□□ -0.92
GABPB1-205ENST00000429662 PLXNB2O15031 1838 aa9.3□□□□□ -0.92
GABPB1-205ENST00000429662 CCL15-CCL14A0A0B4J2E2 113 aa9.29□□□□□ -0.92
GABPB1-205ENST00000429662 CCT8L1PA6NM43 557 aa9.29□□□□□ -0.92
GABPB1-205ENST00000429662 NDC80O14777 642 aa9.29□□□□□ -0.92
GABPB1-205ENST00000429662 RASGRF2O14827 1237 aa9.29□□□□□ -0.92
GABPB1-205ENST00000429662 FSCN2O14926 492 aa9.29□□□□□ -0.92
GABPB1-205ENST00000429662 SPOPO43791 374 aa9.29□□□□□ -0.92
GABPB1-205ENST00000429662 CTNND1O60716 968 aaKnown RBP9.29□□□□□ -0.92
GABPB1-205ENST00000429662 CAND2O75155 1236 aa9.29□□□□□ -0.92
GABPB1-205ENST00000429662 LRRN2O75325 713 aa9.29□□□□□ -0.92
GABPB1-205ENST00000429662 SGPL1O95470 568 aa9.29□□□□□ -0.92
GABPB1-205ENST00000429662 ECEL1O95672 775 aa9.29□□□□□ -0.92
GABPB1-205ENST00000429662 GNRH1P01148 92 aa9.29□□□□□ -0.92
GABPB1-205ENST00000429662 ICAM1P05362 532 aa9.29□□□□□ -0.92
GABPB1-205ENST00000429662 FDX1P10109 184 aa9.29□□□□□ -0.92
GABPB1-205ENST00000429662 TMOD1P28289 359 aa9.29□□□□□ -0.92
GABPB1-205ENST00000429662 GRK4P32298 578 aa9.29□□□□□ -0.92
GABPB1-205ENST00000429662 RARRES1P49788 294 aa9.29□□□□□ -0.92
GABPB1-205ENST00000429662 PDE6CP51160 858 aa9.29□□□□□ -0.92
GABPB1-205ENST00000429662 PRMT2P55345 433 aa9.29□□□□□ -0.92
GABPB1-205ENST00000429662 BPIFB4P59827 614 aa9.29□□□□□ -0.92
GABPB1-205ENST00000429662 CDR2Q01850 454 aa9.29□□□□□ -0.92
GABPB1-205ENST00000429662 PPP3CAQ08209 521 aa9.29□□□□□ -0.92
GABPB1-205ENST00000429662 PTP4A2Q12974 167 aa9.29□□□□□ -0.92
GABPB1-205ENST00000429662 ZNF211Q13398 564 aaPredicted RBP9.29□□□□□ -0.92
GABPB1-205ENST00000429662 MESDQ14696 234 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms