RNA–Protein interactions for RNA: ENST00000428704.1

HDAC1-202, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 664 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-202ENST00000428704 ZNF830Q96NB3 372 aaPredicted RBP9.53□□□□□ -0.88
HDAC1-202ENST00000428704 PPP1R16BQ96T49 567 aa9.53□□□□□ -0.88
HDAC1-202ENST00000428704 GTPBP4Q9BZE4 634 aaKnown RBP9.53□□□□□ -0.88
HDAC1-202ENST00000428704 TMX1Q9H3N1 280 aa9.53□□□□□ -0.88
HDAC1-202ENST00000428704 CUEDC2Q9H467 287 aa9.53□□□□□ -0.88
HDAC1-202ENST00000428704 MAGEF1Q9HAY2 307 aa9.53□□□□□ -0.88
HDAC1-202ENST00000428704 ATP6V0A4Q9HBG4 840 aa9.53□□□□□ -0.88
HDAC1-202ENST00000428704 C1orf112Q9NSG2 853 aa9.53□□□□□ -0.88
HDAC1-202ENST00000428704 A0A087WWV3 80 aa9.52□□□□□ -0.89
HDAC1-202ENST00000428704 MGEA5O60502 916 aa9.52□□□□□ -0.89
HDAC1-202ENST00000428704 GPR32O75388 356 aa9.52□□□□□ -0.89
HDAC1-202ENST00000428704 VTNP04004 478 aa9.52□□□□□ -0.89
HDAC1-202ENST00000428704 ZNF18P17022 549 aa9.52□□□□□ -0.89
HDAC1-202ENST00000428704 TXLNAP40222 546 aa9.52□□□□□ -0.89
HDAC1-202ENST00000428704 FANCCQ00597 558 aa9.52□□□□□ -0.89
HDAC1-202ENST00000428704 DRP2Q13474 957 aa9.52□□□□□ -0.89
HDAC1-202ENST00000428704 LPAL2Q16609 132 aa9.52□□□□□ -0.89
HDAC1-202ENST00000428704 KIZQ2M2Z5 673 aa9.52□□□□□ -0.89
HDAC1-202ENST00000428704 PLA2G4FQ68DD2 849 aa9.52□□□□□ -0.89
HDAC1-202ENST00000428704 SLC24A5Q71RS6 500 aa9.52□□□□□ -0.89
HDAC1-202ENST00000428704 ANO5Q75V66 913 aa9.52□□□□□ -0.89
HDAC1-202ENST00000428704 NME8Q8N427 588 aa9.52□□□□□ -0.89
HDAC1-202ENST00000428704 LRRC71Q8N4P6 559 aa9.52□□□□□ -0.89
HDAC1-202ENST00000428704 CACTINQ8WUQ7 758 aaKnown RBP9.52□□□□□ -0.89
HDAC1-202ENST00000428704 NXPE3Q969Y0 559 aa9.52□□□□□ -0.89
HDAC1-202ENST00000428704 DHX58Q96C10 678 aa9.52□□□□□ -0.89
HDAC1-202ENST00000428704 SHDQ96IW2 340 aa9.52□□□□□ -0.89
HDAC1-202ENST00000428704 ADAM2Q99965 735 aa9.52□□□□□ -0.89
HDAC1-202ENST00000428704 SH2D3AQ9BRG2 576 aa9.52□□□□□ -0.89
HDAC1-202ENST00000428704 NIFKQ9BYG3 293 aaKnown RBP9.52□□□□□ -0.89
HDAC1-202ENST00000428704 RMND1Q9NWS8 449 aa9.52□□□□□ -0.89
HDAC1-202ENST00000428704 NOC2LQ9Y3T9 749 aaKnown RBP9.52□□□□□ -0.89
HDAC1-202ENST00000428704 IGKV6-21A0A0C4DH24 114 aa9.51□□□□□ -0.89
HDAC1-202ENST00000428704 MAGEB2O15479 319 aa9.51□□□□□ -0.89
HDAC1-202ENST00000428704 NDUFV2P19404 249 aa9.51□□□□□ -0.89
HDAC1-202ENST00000428704 PSMC5P62195 406 aa9.51□□□□□ -0.89
HDAC1-202ENST00000428704 RING1Q06587 406 aa9.51□□□□□ -0.89
HDAC1-202ENST00000428704 PDIA5Q14554 519 aa9.51□□□□□ -0.89
HDAC1-202ENST00000428704 KCNB1Q14721 858 aa9.51□□□□□ -0.89
HDAC1-202ENST00000428704 UBXN2BQ14CS0 331 aa9.51□□□□□ -0.89
HDAC1-202ENST00000428704 MTERF2Q49AM1 385 aa9.51□□□□□ -0.89
HDAC1-202ENST00000428704 XKR3Q5GH77 459 aa9.51□□□□□ -0.89
HDAC1-202ENST00000428704 LAIR1Q6GTX8 287 aa9.51□□□□□ -0.89
HDAC1-202ENST00000428704 EFCAB12Q6NXP0 572 aa9.51□□□□□ -0.89
HDAC1-202ENST00000428704 PRR23CQ6ZRP0 262 aa9.51□□□□□ -0.89
HDAC1-202ENST00000428704 FAM228AQ86W67 206 aa9.51□□□□□ -0.89
HDAC1-202ENST00000428704 ABI1Q8IZP0 508 aa9.51□□□□□ -0.89
HDAC1-202ENST00000428704 LRRC43Q8N309 656 aa9.51□□□□□ -0.89
HDAC1-202ENST00000428704 METTL13Q8N6R0 699 aa9.51□□□□□ -0.89
HDAC1-202ENST00000428704 PDILTQ8N807 584 aa9.51□□□□□ -0.89
HDAC1-202ENST00000428704 SLC22A17Q8WUG5 538 aa9.51□□□□□ -0.89
HDAC1-202ENST00000428704 STAMQ92783 540 aa9.51□□□□□ -0.89
HDAC1-202ENST00000428704 MTMR9Q96QG7 549 aa9.51□□□□□ -0.89
HDAC1-202ENST00000428704 OSMRQ99650 979 aa9.51□□□□□ -0.89
HDAC1-202ENST00000428704 NAP1L4Q99733 375 aaKnown RBP9.51□□□□□ -0.89
HDAC1-202ENST00000428704 XPO4Q9C0E2 1151 aaKnown RBP9.51□□□□□ -0.89
HDAC1-202ENST00000428704 TMEM117Q9H0C3 514 aa9.51□□□□□ -0.89
HDAC1-202ENST00000428704 TMEM60Q9H2L4 133 aa9.51□□□□□ -0.89
HDAC1-202ENST00000428704 ADAMTS10Q9H324 1103 aa9.51□□□□□ -0.89
HDAC1-202ENST00000428704 RGS18Q9NS28 235 aa9.51□□□□□ -0.89
HDAC1-202ENST00000428704 NRBP2Q9NSY0 501 aa9.51□□□□□ -0.89
HDAC1-202ENST00000428704 SEMA4GQ9NTN9 838 aa9.51□□□□□ -0.89
HDAC1-202ENST00000428704 FANCLQ9NW38 375 aa9.51□□□□□ -0.89
HDAC1-202ENST00000428704 TMEM161AQ9NX61 479 aa9.51□□□□□ -0.89
HDAC1-202ENST00000428704 IFNKQ9P0W0 207 aa9.51□□□□□ -0.89
HDAC1-202ENST00000428704 PYCARDQ9ULZ3 195 aa9.51□□□□□ -0.89
HDAC1-202ENST00000428704 GINS2Q9Y248 185 aa9.51□□□□□ -0.89
HDAC1-202ENST00000428704 GCN1Q92616 2671 aaKnown RBP9.5□□□□□ -0.89
HDAC1-202ENST00000428704 FANCMQ8IYD8 2048 aa9.5□□□□□ -0.89
HDAC1-202ENST00000428704 KANSL1LA0AUZ9 987 aa9.5□□□□□ -0.89
HDAC1-202ENST00000428704 LRRC10BA6NIK2 292 aa9.5□□□□□ -0.89
HDAC1-202ENST00000428704 C9IYK1 514 aa9.5□□□□□ -0.89
HDAC1-202ENST00000428704 SLC26A4O43511 780 aa9.5□□□□□ -0.89
HDAC1-202ENST00000428704 GDF9O60383 454 aa9.5□□□□□ -0.89
HDAC1-202ENST00000428704 LRP3O75074 770 aa9.5□□□□□ -0.89
HDAC1-202ENST00000428704 N4BP1O75113 896 aaKnown RBP9.5□□□□□ -0.89
HDAC1-202ENST00000428704 RETP07949 1114 aa9.5□□□□□ -0.89
HDAC1-202ENST00000428704 TPM2P07951 284 aa9.5□□□□□ -0.89
HDAC1-202ENST00000428704 OR52Z1P0C646 297 aa9.5□□□□□ -0.89
HDAC1-202ENST00000428704 QARSP47897 775 aaKnown RBP9.5□□□□□ -0.89
HDAC1-202ENST00000428704 GPC3P51654 580 aa9.5□□□□□ -0.89
HDAC1-202ENST00000428704 CRYBB1P53674 252 aaPredicted RBP9.5□□□□□ -0.89
HDAC1-202ENST00000428704 UBASH3AP57075 661 aa9.5□□□□□ -0.89
HDAC1-202ENST00000428704 NLRP11P59045 1033 aaKnown RBP9.5□□□□□ -0.89
HDAC1-202ENST00000428704 STARD6P59095 220 aa9.5□□□□□ -0.89
HDAC1-202ENST00000428704 GUCA2AQ02747 115 aa9.5□□□□□ -0.89
HDAC1-202ENST00000428704 CUL4BQ13620 913 aa9.5□□□□□ -0.89
HDAC1-202ENST00000428704 DSC3Q14574 896 aa9.5□□□□□ -0.89
HDAC1-202ENST00000428704 EPHA7Q15375 998 aa9.5□□□□□ -0.89
HDAC1-202ENST00000428704 CALCRLQ16602 461 aa9.5□□□□□ -0.89
HDAC1-202ENST00000428704 SPATA1Q5VX52 437 aa9.5□□□□□ -0.89
HDAC1-202ENST00000428704 ISM2Q6H9L7 571 aa9.5□□□□□ -0.89
HDAC1-202ENST00000428704 NCAPH2Q6IBW4 605 aa9.5□□□□□ -0.89
HDAC1-202ENST00000428704 TSSK4Q6SA08 328 aa9.5□□□□□ -0.89
HDAC1-202ENST00000428704 LRRC55Q6ZSA7 311 aa9.5□□□□□ -0.89
HDAC1-202ENST00000428704 PPFIBP1Q86W92 1011 aa9.5□□□□□ -0.89
HDAC1-202ENST00000428704 SLFN12Q8IYM2 578 aa9.5□□□□□ -0.89
HDAC1-202ENST00000428704 VPS52Q8N1B4 723 aa9.5□□□□□ -0.89
HDAC1-202ENST00000428704 SLC39A11Q8N1S5 342 aa9.5□□□□□ -0.89
HDAC1-202ENST00000428704 IGSF22Q8N9C0 903 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms