RNA–Protein interactions for RNA: ENST00000428331.6

ATP2C1-204, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ATP2C1, Length 4,795 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-204ENST00000428331 PCDHB18PQ96TA0 734 aa11.42□□□□□ -0.58
ATP2C1-204ENST00000428331 ADGRA3Q8IWK6 1321 aa11.42□□□□□ -0.58
ATP2C1-204ENST00000428331 TCEA3O75764 348 aa11.41□□□□□ -0.58
ATP2C1-204ENST00000428331 SMNDC1O75940 238 aaKnown RBP eCLIP11.41□□□□□ -0.58
ATP2C1-204ENST00000428331 TJP3O95049 919 aa11.41□□□□□ -0.58
ATP2C1-204ENST00000428331 SERPINB2P05120 415 aa11.41□□□□□ -0.58
ATP2C1-204ENST00000428331 PTPN4P29074 926 aa11.41□□□□□ -0.58
ATP2C1-204ENST00000428331 YARSP54577 528 aaKnown RBP11.41□□□□□ -0.58
ATP2C1-204ENST00000428331 SNRPFP62306 86 aaKnown RBP11.41□□□□□ -0.58
ATP2C1-204ENST00000428331 DLG4P78352 724 aa11.41□□□□□ -0.58
ATP2C1-204ENST00000428331 TCEAL1Q15170 157 aa11.41□□□□□ -0.58
ATP2C1-204ENST00000428331 NLRP9Q7RTR0 991 aa11.41□□□□□ -0.58
ATP2C1-204ENST00000428331 APBB1IPQ7Z5R6 666 aaPredicted RBP11.41□□□□□ -0.58
ATP2C1-204ENST00000428331 SLCO2A1Q92959 643 aa11.41□□□□□ -0.58
ATP2C1-204ENST00000428331 TBC1D10AQ9BXI6 508 aa11.41□□□□□ -0.58
ATP2C1-204ENST00000428331 LGALS13Q9UHV8 139 aa11.41□□□□□ -0.58
ATP2C1-204ENST00000428331 LAMB1P07942 1786 aa11.41□□□□□ -0.58
ATP2C1-204ENST00000428331 OAS1P00973 400 aaKnown RBP11.41□□□□□ -0.58
ATP2C1-204ENST00000428331 CCNB1P14635 433 aa11.41□□□□□ -0.58
ATP2C1-204ENST00000428331 VHLP40337 213 aa11.41□□□□□ -0.58
ATP2C1-204ENST00000428331 TBC1D10BQ4KMP7 808 aaPredicted RBP11.41□□□□□ -0.58
ATP2C1-204ENST00000428331 XKR9Q5GH70 373 aa11.41□□□□□ -0.58
ATP2C1-204ENST00000428331 MKL1Q969V6 931 aa11.41□□□□□ -0.58
ATP2C1-204ENST00000428331 RBM41Q96IZ5 413 aaKnown RBP11.41□□□□□ -0.58
ATP2C1-204ENST00000428331 TMEM117Q9H0C3 514 aa11.41□□□□□ -0.58
ATP2C1-204ENST00000428331 NPHS2Q9NP85 383 aa11.41□□□□□ -0.58
ATP2C1-204ENST00000428331 ANKFY1Q9P2R3 1169 aa11.41□□□□□ -0.58
ATP2C1-204ENST00000428331 SLC16A4O15374 487 aa11.41□□□□□ -0.58
ATP2C1-204ENST00000428331 MAP3K7O43318 606 aa11.41□□□□□ -0.58
ATP2C1-204ENST00000428331 CACNB3P54284 484 aa11.41□□□□□ -0.58
ATP2C1-204ENST00000428331 GPS1Q13098 491 aa11.41□□□□□ -0.58
ATP2C1-204ENST00000428331 PPP2R5CQ13362 524 aa11.41□□□□□ -0.58
ATP2C1-204ENST00000428331 HP1BP3Q5SSJ5 553 aaPredicted RBP11.41□□□□□ -0.58
ATP2C1-204ENST00000428331 HHIPL2Q6UWX4 724 aa11.41□□□□□ -0.58
ATP2C1-204ENST00000428331 SLC30A10Q6XR72 485 aa11.41□□□□□ -0.58
ATP2C1-204ENST00000428331 ZBED8Q8IZ13 594 aa11.41□□□□□ -0.58
ATP2C1-204ENST00000428331 PYROXD1Q8WU10 500 aa11.41□□□□□ -0.58
ATP2C1-204ENST00000428331 TEKT4Q8WW24 435 aa11.41□□□□□ -0.58
ATP2C1-204ENST00000428331 SYT11Q9BT88 431 aa11.41□□□□□ -0.58
ATP2C1-204ENST00000428331 RPL26L1Q9UNX3 145 aaKnown RBP11.41□□□□□ -0.58
ATP2C1-204ENST00000428331 AGTPBP1Q9UPW5 1226 aa11.41□□□□□ -0.58
ATP2C1-204ENST00000428331 SCINQ9Y6U3 715 aa11.41□□□□□ -0.58
ATP2C1-204ENST00000428331 CFAP69A5D8W1 941 aa11.41□□□□□ -0.58
ATP2C1-204ENST00000428331 SGK1O00141 431 aa11.41□□□□□ -0.58
ATP2C1-204ENST00000428331 TNNI1P19237 187 aa11.41□□□□□ -0.58
ATP2C1-204ENST00000428331 POLE2P56282 527 aa11.41□□□□□ -0.58
ATP2C1-204ENST00000428331 DMP1Q13316 513 aaPredicted RBP11.41□□□□□ -0.58
ATP2C1-204ENST00000428331 SNRNP35Q16560 246 aaKnown RBP11.41□□□□□ -0.58
ATP2C1-204ENST00000428331 PRR5LQ6MZQ0 368 aa11.41□□□□□ -0.58
ATP2C1-204ENST00000428331 PPP1R2P3Q6NXS1 205 aa11.41□□□□□ -0.58
ATP2C1-204ENST00000428331 ZC3H18Q86VM9 953 aaKnown RBP11.41□□□□□ -0.58
ATP2C1-204ENST00000428331 LENG9Q96B70 501 aa11.41□□□□□ -0.58
ATP2C1-204ENST00000428331 IMPG2Q9BZV3 1241 aa11.41□□□□□ -0.58
ATP2C1-204ENST00000428331 PSMC3IPQ9P2W1 217 aaPredicted RBP11.41□□□□□ -0.58
ATP2C1-204ENST00000428331 POLLQ9UGP5 575 aa11.41□□□□□ -0.58
ATP2C1-204ENST00000428331 ATP6V1C1P21283 382 aa11.4□□□□□ -0.58
ATP2C1-204ENST00000428331 EPHB2P29323 1055 aa11.4□□□□□ -0.58
ATP2C1-204ENST00000428331 FMO1Q01740 532 aa11.4□□□□□ -0.58
ATP2C1-204ENST00000428331 FAM196AQ6ZSG2 479 aa11.4□□□□□ -0.58
ATP2C1-204ENST00000428331 FAM118BQ9BPY3 351 aa11.4□□□□□ -0.58
ATP2C1-204ENST00000428331 KIAA1683Q9H0B3 1180 aa11.4□□□□□ -0.58
ATP2C1-204ENST00000428331 TMEM8AQ9HCN3 771 aa11.4□□□□□ -0.58
ATP2C1-204ENST00000428331 DLGAP2Q9P1A6 1054 aa11.4□□□□□ -0.58
ATP2C1-204ENST00000428331 GH2P01242 217 aa11.4□□□□□ -0.58
ATP2C1-204ENST00000428331 CRKP46108 304 aa11.4□□□□□ -0.58
ATP2C1-204ENST00000428331 ARSEP51690 589 aa11.4□□□□□ -0.58
ATP2C1-204ENST00000428331 ARFIP2P53365 341 aa11.4□□□□□ -0.58
ATP2C1-204ENST00000428331 LVRNQ6Q4G3 990 aa11.4□□□□□ -0.58
ATP2C1-204ENST00000428331 RBBP8NLQ8NC74 664 aaPredicted RBP11.4□□□□□ -0.58
ATP2C1-204ENST00000428331 SHC3Q92529 594 aa11.4□□□□□ -0.58
ATP2C1-204ENST00000428331 C11orf70Q9BRQ4 267 aa11.4□□□□□ -0.58
ATP2C1-204ENST00000428331 GPR88Q9GZN0 384 aa11.4□□□□□ -0.58
ATP2C1-204ENST00000428331 PRR12Q9ULL5 1215 aa11.4□□□□□ -0.58
ATP2C1-204ENST00000428331 FOXO6A8MYZ6 492 aa11.4□□□□□ -0.58
ATP2C1-204ENST00000428331 ABLIM1O14639 778 aa11.4□□□□□ -0.58
ATP2C1-204ENST00000428331 PSMD10O75832 226 aa11.4□□□□□ -0.58
ATP2C1-204ENST00000428331 KRT1P04264 644 aa11.4□□□□□ -0.58
ATP2C1-204ENST00000428331 ABHD2P08910 425 aa11.4□□□□□ -0.58
ATP2C1-204ENST00000428331 PDIA2Q13087 525 aaKnown RBP11.4□□□□□ -0.58
ATP2C1-204ENST00000428331 RCN2Q14257 317 aa11.4□□□□□ -0.58
ATP2C1-204ENST00000428331 EPC2Q52LR7 807 aa11.4□□□□□ -0.58
ATP2C1-204ENST00000428331 BRDTQ58F21 947 aaPredicted RBP11.4□□□□□ -0.58
ATP2C1-204ENST00000428331 TNFAIP8L3Q5GJ75 292 aa11.4□□□□□ -0.58
ATP2C1-204ENST00000428331 FAM13CQ8NE31 585 aa11.4□□□□□ -0.58
ATP2C1-204ENST00000428331 GMCL1Q96IK5 515 aa11.4□□□□□ -0.58
ATP2C1-204ENST00000428331 ACP6Q9NPH0 428 aa11.4□□□□□ -0.58
ATP2C1-204ENST00000428331 PAPOLBQ9NRJ5 636 aaKnown RBP11.4□□□□□ -0.58
ATP2C1-204ENST00000428331 CCDC189A1A4V9 331 aa11.4□□□□□ -0.59
ATP2C1-204ENST00000428331 I3L4J1 428 aa11.4□□□□□ -0.59
ATP2C1-204ENST00000428331 MT-ND3P03897 115 aa11.4□□□□□ -0.59
ATP2C1-204ENST00000428331 ATP4AP20648 1035 aa11.4□□□□□ -0.59
ATP2C1-204ENST00000428331 NFIAQ12857 509 aa11.4□□□□□ -0.59
ATP2C1-204ENST00000428331 TAF1BQ53T94 588 aaPredicted RBP11.4□□□□□ -0.59
ATP2C1-204ENST00000428331 RASIP1Q5U651 963 aa11.4□□□□□ -0.59
ATP2C1-204ENST00000428331 CHADLQ6NUI6 762 aa11.4□□□□□ -0.59
ATP2C1-204ENST00000428331 SAR1AQ9NR31 198 aa11.4□□□□□ -0.59
ATP2C1-204ENST00000428331 PCDHB2Q9Y5E7 798 aa11.4□□□□□ -0.59
ATP2C1-204ENST00000428331 COL22A1Q8NFW1 1626 aaPredicted RBP11.4□□□□□ -0.59
ATP2C1-204ENST00000428331 PPEF1O14829 653 aaPredicted RBP11.39□□□□□ -0.59
ATP2C1-204ENST00000428331 CBX6O95503 412 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms