RNA–Protein interactions for RNA: ENST00000427563.1

COL9A2-204, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 3

Gene COL9A2, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-204ENST00000427563 CUTAO60888 179 aa20.89■□□□□ 0.93
COL9A2-204ENST00000427563 C1RP00736 705 aa20.89■□□□□ 0.93
COL9A2-204ENST00000427563 COL9A1P20849 921 aa20.89■□□□□ 0.93
COL9A2-204ENST00000427563 ADSSP30520 456 aa20.89■□□□□ 0.93
COL9A2-204ENST00000427563 GUCY2FP51841 1108 aa20.89■□□□□ 0.93
COL9A2-204ENST00000427563 DNM1Q05193 864 aaKnown RBP20.89■□□□□ 0.93
COL9A2-204ENST00000427563 ELAVL2Q12926 359 aaKnown RBP20.89■□□□□ 0.93
COL9A2-204ENST00000427563 ATAT1Q5SQI0 421 aa20.89■□□□□ 0.93
COL9A2-204ENST00000427563 C15orf39Q6ZRI6 1047 aa20.89■□□□□ 0.93
COL9A2-204ENST00000427563 PLEKHA5Q9HAU0 1116 aa20.89■□□□□ 0.93
COL9A2-204ENST00000427563 TSHZ2Q9NRE2 1034 aa20.89■□□□□ 0.93
COL9A2-204ENST00000427563 KBTBD4Q9NVX7 518 aa20.89■□□□□ 0.93
COL9A2-204ENST00000427563 MTRRQ9UBK8 725 aa20.89■□□□□ 0.93
COL9A2-204ENST00000427563 FBXW11Q9UKB1 542 aa20.89■□□□□ 0.93
COL9A2-204ENST00000427563 CPSF3Q9UKF6 684 aaKnown RBP20.89■□□□□ 0.93
COL9A2-204ENST00000427563 CCDC195A0A1B0GUA6 201 aa20.88■□□□□ 0.93
COL9A2-204ENST00000427563 KREMEN2Q8NCW0 462 aa20.88■□□□□ 0.93
COL9A2-204ENST00000427563 ZSWIM2Q8NEG5 633 aa20.88■□□□□ 0.93
COL9A2-204ENST00000427563 HDAC7Q8WUI4 952 aa20.88■□□□□ 0.93
COL9A2-204ENST00000427563 MSTO1Q9BUK6 570 aa20.88■□□□□ 0.93
COL9A2-204ENST00000427563 SEL1LQ9UBV2 794 aa20.88■□□□□ 0.93
COL9A2-204ENST00000427563 PCDHA7Q9UN72 937 aa20.88■□□□□ 0.93
COL9A2-204ENST00000427563 NOTCH4Q99466 2003 aa20.88■□□□□ 0.93
COL9A2-204ENST00000427563 TBC1D4O60343 1298 aa20.87■□□□□ 0.93
COL9A2-204ENST00000427563 N4BP1O75113 896 aaKnown RBP20.87■□□□□ 0.93
COL9A2-204ENST00000427563 PDIA4P13667 645 aaKnown RBP20.87■□□□□ 0.93
COL9A2-204ENST00000427563 GAP43P17677 238 aa20.87■□□□□ 0.93
COL9A2-204ENST00000427563 LRPAP1P30533 357 aa20.87■□□□□ 0.93
COL9A2-204ENST00000427563 RPL9P32969 192 aaKnown RBP20.87■□□□□ 0.93
COL9A2-204ENST00000427563 CREMQ03060 361 aa20.87■□□□□ 0.93
COL9A2-204ENST00000427563 CRELD2Q6UXH1 353 aaPredicted RBP20.87■□□□□ 0.93
COL9A2-204ENST00000427563 GLIS3Q8NEA6 775 aa20.87■□□□□ 0.93
COL9A2-204ENST00000427563 EDAQ92838 391 aa20.87■□□□□ 0.93
COL9A2-204ENST00000427563 DHX58Q96C10 678 aa20.87■□□□□ 0.93
COL9A2-204ENST00000427563 KIF12Q96FN5 646 aa20.87■□□□□ 0.93
COL9A2-204ENST00000427563 RHOBTB2Q9BYZ6 727 aa20.87■□□□□ 0.93
COL9A2-204ENST00000427563 PLEKHA4Q9H4M7 779 aa20.87■□□□□ 0.93
COL9A2-204ENST00000427563 MRPL44Q9H9J2 332 aaKnown RBP20.87■□□□□ 0.93
COL9A2-204ENST00000427563 OLFML3Q9NRN5 406 aa20.87■□□□□ 0.93
COL9A2-204ENST00000427563 SCN1AP35498 2009 aa20.87■□□□□ 0.93
COL9A2-204ENST00000427563 TSC2P49815 1807 aa20.86■□□□□ 0.93
COL9A2-204ENST00000427563 PPEF2O14830 753 aa20.86■□□□□ 0.93
COL9A2-204ENST00000427563 IDEP14735 1019 aa20.86■□□□□ 0.93
COL9A2-204ENST00000427563 ACOT2P49753 483 aa20.86■□□□□ 0.93
COL9A2-204ENST00000427563 ZXDAP98168 799 aa20.86■□□□□ 0.93
COL9A2-204ENST00000427563 RAB33AQ14088 237 aa20.86■□□□□ 0.93
COL9A2-204ENST00000427563 MRPL58Q14197 206 aaKnown RBP20.86■□□□□ 0.93
COL9A2-204ENST00000427563 L1TD1Q5T7N2 865 aaKnown RBP20.86■□□□□ 0.93
COL9A2-204ENST00000427563 HPS3Q969F9 1004 aa20.86■□□□□ 0.93
COL9A2-204ENST00000427563 HVCN1Q96D96 273 aa20.86■□□□□ 0.93
COL9A2-204ENST00000427563 RPF1Q9H9Y2 349 aaKnown RBP20.86■□□□□ 0.93
COL9A2-204ENST00000427563 PANK4Q9NVE7 773 aa20.86■□□□□ 0.93
COL9A2-204ENST00000427563 BACE2Q9Y5Z0 518 aa20.86■□□□□ 0.93
COL9A2-204ENST00000427563 SPDYE4A6NLX3 237 aa20.85■□□□□ 0.93
COL9A2-204ENST00000427563 PRR33A8MZF0 331 aa20.85■□□□□ 0.93
COL9A2-204ENST00000427563 ZMYND10O75800 440 aa20.85■□□□□ 0.93
COL9A2-204ENST00000427563 NFICP08651 508 aa20.85■□□□□ 0.93
COL9A2-204ENST00000427563 OR1D2P34982 312 aa20.85■□□□□ 0.93
COL9A2-204ENST00000427563 WNT7BP56706 349 aa20.85■□□□□ 0.93
COL9A2-204ENST00000427563 PPP2R3AQ06190 1150 aa20.85■□□□□ 0.93
COL9A2-204ENST00000427563 PTPN21Q16825 1174 aa20.85■□□□□ 0.93
COL9A2-204ENST00000427563 VARS2Q5ST30 1063 aaKnown RBP20.85■□□□□ 0.93
COL9A2-204ENST00000427563 JADE1Q6IE81 842 aa20.85■□□□□ 0.93
COL9A2-204ENST00000427563 KCNG4Q8TDN1 519 aa20.85■□□□□ 0.93
COL9A2-204ENST00000427563 SUSD3Q96L08 255 aa20.85■□□□□ 0.93
COL9A2-204ENST00000427563 TRIM9Q9C026 710 aa20.85■□□□□ 0.93
COL9A2-204ENST00000427563 TNMDQ9H2S6 317 aa20.85■□□□□ 0.93
COL9A2-204ENST00000427563 SMOC2Q9H3U7 446 aa20.85■□□□□ 0.93
COL9A2-204ENST00000427563 ZDHHC7Q9NXF8 308 aa20.85■□□□□ 0.93
COL9A2-204ENST00000427563 RCOR1Q9UKL0 485 aa20.85■□□□□ 0.93
COL9A2-204ENST00000427563 NR2E1Q9Y466 385 aa20.85■□□□□ 0.93
COL9A2-204ENST00000427563 CDY1Q9Y6F8 540 aa20.85■□□□□ 0.93
COL9A2-204ENST00000427563 GCNT3O95395 438 aa20.84■□□□□ 0.93
COL9A2-204ENST00000427563 ASGR2P07307 311 aa20.84■□□□□ 0.93
COL9A2-204ENST00000427563 CASP1P29466 404 aa20.84■□□□□ 0.93
COL9A2-204ENST00000427563 ABCD1P33897 745 aa20.84■□□□□ 0.93
COL9A2-204ENST00000427563 AARSP49588 968 aaKnown RBP eCLIP20.84■□□□□ 0.93
COL9A2-204ENST00000427563 KYAT1Q16773 422 aa20.84■□□□□ 0.93
COL9A2-204ENST00000427563 RESP18Q5W5W9 173 aa20.84■□□□□ 0.93
COL9A2-204ENST00000427563 ADALQ6DHV7 355 aa20.84■□□□□ 0.93
COL9A2-204ENST00000427563 PDXDC1Q6P996 788 aa20.84■□□□□ 0.93
COL9A2-204ENST00000427563 ZDHHC14Q8IZN3 488 aa20.84■□□□□ 0.93
COL9A2-204ENST00000427563 SMG7Q92540 1137 aaKnown RBP20.84■□□□□ 0.93
COL9A2-204ENST00000427563 PRKD2Q9BZL6 878 aa20.84■□□□□ 0.93
COL9A2-204ENST00000427563 WDR6Q9NNW5 1121 aaKnown RBP20.84■□□□□ 0.93
COL9A2-204ENST00000427563 AGO2Q9UKV8 859 aaKnown RBP20.84■□□□□ 0.93
COL9A2-204ENST00000427563 UBQLN1Q9UMX0 589 aaKnown RBP20.84■□□□□ 0.93
COL9A2-204ENST00000427563 USTQ9Y2C2 406 aa20.84■□□□□ 0.93
COL9A2-204ENST00000427563 TRAPPC3O43617 180 aa20.83■□□□□ 0.93
COL9A2-204ENST00000427563 PRPF6O94906 941 aaKnown RBP20.83■□□□□ 0.93
COL9A2-204ENST00000427563 CYP3A5P20815 502 aa20.83■□□□□ 0.93
COL9A2-204ENST00000427563 HOXD13P35453 343 aa20.83■□□□□ 0.93
COL9A2-204ENST00000427563 SPATA1Q5VX52 437 aa20.83■□□□□ 0.93
COL9A2-204ENST00000427563 ATL3Q6DD88 541 aa20.83■□□□□ 0.93
COL9A2-204ENST00000427563 CNNM4Q6P4Q7 775 aa20.83■□□□□ 0.93
COL9A2-204ENST00000427563 CYP26C1Q6V0L0 522 aa20.83■□□□□ 0.93
COL9A2-204ENST00000427563 CCDC149Q6ZUS6 474 aa20.83■□□□□ 0.93
COL9A2-204ENST00000427563 HFE2Q6ZVN8 426 aa20.83■□□□□ 0.93
COL9A2-204ENST00000427563 ANKS3Q6ZW76 656 aa20.83■□□□□ 0.93
COL9A2-204ENST00000427563 TDRD5Q8NAT2 981 aaKnown RBP20.83■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms