RNA–Protein interactions for RNA: ENST00000427191.6

PTPN13-203, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,487 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-203ENST00000427191 USP17L1Q7RTZ2 530 aa15.14■□□□□ 0.01
PTPN13-203ENST00000427191 NFRKBQ6P4R8 1299 aa15.14■□□□□ 0.01
PTPN13-203ENST00000427191 IYDQ6PHW0 289 aa15.14■□□□□ 0.01
PTPN13-203ENST00000427191 ZNF302Q9NR11 478 aa15.14■□□□□ 0.01
PTPN13-203ENST00000427191 FNTAP49354 379 aa15.14■□□□□ 0.01
PTPN13-203ENST00000427191 USP11P51784 963 aa15.14■□□□□ 0.01
PTPN13-203ENST00000427191 TRIM65Q6PJ69 517 aa15.14■□□□□ 0.01
PTPN13-203ENST00000427191 TRAPPC11Q7Z392 1133 aa15.14■□□□□ 0.01
PTPN13-203ENST00000427191 GPR141Q7Z602 305 aa15.14■□□□□ 0.01
PTPN13-203ENST00000427191 SRLQ86TD4 932 aa15.14■□□□□ 0.01
PTPN13-203ENST00000427191 TLK2Q86UE8 772 aa15.14■□□□□ 0.01
PTPN13-203ENST00000427191 MICU2Q8IYU8 434 aa15.14■□□□□ 0.01
PTPN13-203ENST00000427191 RTKN2Q8IZC4 609 aa15.14■□□□□ 0.01
PTPN13-203ENST00000427191 ATPAF2Q8N5M1 289 aa15.14■□□□□ 0.01
PTPN13-203ENST00000427191 RIN3Q8TB24 985 aa15.14■□□□□ 0.01
PTPN13-203ENST00000427191 NSUN6Q8TEA1 469 aaKnown RBP15.14■□□□□ 0.01
PTPN13-203ENST00000427191 XPO6Q96QU8 1125 aaKnown RBP15.14■□□□□ 0.01
PTPN13-203ENST00000427191 ORAI2Q96SN7 254 aa15.14■□□□□ 0.01
PTPN13-203ENST00000427191 RPRD1BQ9NQG5 326 aaKnown RBP15.14■□□□□ 0.01
PTPN13-203ENST00000427191 MAPK1P28482 360 aa15.13■□□□□ 0.01
PTPN13-203ENST00000427191 BTBD8Q5XKL5 378 aa15.13■□□□□ 0.01
PTPN13-203ENST00000427191 SPATA17Q96L03 361 aa15.13■□□□□ 0.01
PTPN13-203ENST00000427191 SH3GL1Q99961 368 aa15.13■□□□□ 0.01
PTPN13-203ENST00000427191 C11orf70Q9BRQ4 267 aa15.13■□□□□ 0.01
PTPN13-203ENST00000427191 C17orf80Q9BSJ5 609 aa15.13■□□□□ 0.01
PTPN13-203ENST00000427191 HEMGNQ9BXL5 484 aa15.13■□□□□ 0.01
PTPN13-203ENST00000427191 UNC45AQ9H3U1 944 aa15.13■□□□□ 0.01
PTPN13-203ENST00000427191 CTNNAL1Q9UBT7 734 aa15.13■□□□□ 0.01
PTPN13-203ENST00000427191 TTC7AQ9ULT0 858 aaPredicted RBP15.13■□□□□ 0.01
PTPN13-203ENST00000427191 RNF103O00237 685 aa15.13■□□□□ 0.01
PTPN13-203ENST00000427191 CYTH3O43739 400 aa15.13■□□□□ 0.01
PTPN13-203ENST00000427191 QARSP47897 775 aaKnown RBP15.13■□□□□ 0.01
PTPN13-203ENST00000427191 SNAP25P60880 206 aa15.13■□□□□ 0.01
PTPN13-203ENST00000427191 C11orf88Q6PI97 169 aa15.13■□□□□ 0.01
PTPN13-203ENST00000427191 TTC33Q6PID6 262 aaPredicted RBP15.13■□□□□ 0.01
PTPN13-203ENST00000427191 LONP2Q86WA8 852 aa15.13■□□□□ 0.01
PTPN13-203ENST00000427191 PPP2R3CQ969Q6 453 aa15.13■□□□□ 0.01
PTPN13-203ENST00000427191 PZPP20742 1482 aa15.13■□□□□ 0.01
PTPN13-203ENST00000427191 TRIM13O60858 407 aa15.13■□□□□ 0.01
PTPN13-203ENST00000427191 POLBP06746 335 aa15.13■□□□□ 0.01
PTPN13-203ENST00000427191 SPATA4Q8NEY3 305 aa15.13■□□□□ 0.01
PTPN13-203ENST00000427191 DEPDC7Q96QD5 511 aa15.13■□□□□ 0.01
PTPN13-203ENST00000427191 TUFT1Q9NNX1 390 aa15.13■□□□□ 0.01
PTPN13-203ENST00000427191 GRID1Q9ULK0 1009 aa15.13■□□□□ 0.01
PTPN13-203ENST00000427191 MYO1GB0I1T2 1018 aa15.13■□□□□ 0.01
PTPN13-203ENST00000427191 LRRC24Q50LG9 513 aa15.13■□□□□ 0.01
PTPN13-203ENST00000427191 ELOA2Q8IYF1 753 aaPredicted RBP15.13■□□□□ 0.01
PTPN13-203ENST00000427191 ZC3H7BQ9UGR2 993 aaKnown RBP15.13■□□□□ 0.01
PTPN13-203ENST00000427191 NDUFS3O75489 264 aa15.13■□□□□ 0.01
PTPN13-203ENST00000427191 MLNP12872 115 aa15.13■□□□□ 0.01
PTPN13-203ENST00000427191 CACNB1Q02641 598 aaPredicted RBP15.13■□□□□ 0.01
PTPN13-203ENST00000427191 SCN4BQ8IWT1 228 aa15.13■□□□□ 0.01
PTPN13-203ENST00000427191 TMA16Q96EY4 203 aaKnown RBP15.13■□□□□ 0.01
PTPN13-203ENST00000427191 COA1Q9GZY4 146 aa15.13■□□□□ 0.01
PTPN13-203ENST00000427191 DHX35Q9H5Z1 703 aaKnown RBP15.13■□□□□ 0.01
PTPN13-203ENST00000427191 MAGEA13PA6NCF6 341 aa15.13■□□□□ 0.01
PTPN13-203ENST00000427191 SEC24DO94855 1032 aaPredicted RBP15.13■□□□□ 0.01
PTPN13-203ENST00000427191 CCT8L2Q96SF2 557 aa15.13■□□□□ 0.01
PTPN13-203ENST00000427191 BBS2Q9BXC9 721 aa15.13■□□□□ 0.01
PTPN13-203ENST00000427191 LSM7Q9UK45 103 aaKnown RBP15.13■□□□□ 0.01
PTPN13-203ENST00000427191 IQCA1LA6NCM1 817 aa15.12■□□□□ 0.01
PTPN13-203ENST00000427191 DFFAO00273 331 aa15.12■□□□□ 0.01
PTPN13-203ENST00000427191 GAS2L3Q86XJ1 694 aa15.12■□□□□ 0.01
PTPN13-203ENST00000427191 HES6Q96HZ4 224 aa15.12■□□□□ 0.01
PTPN13-203ENST00000427191 PAK5Q9P286 719 aa15.12■□□□□ 0.01
PTPN13-203ENST00000427191 TRIM24O15164 1050 aa15.12■□□□□ 0.01
PTPN13-203ENST00000427191 FKBP9O95302 570 aa15.12■□□□□ 0.01
PTPN13-203ENST00000427191 FKBP9P1Q75LS8 142 aa15.12■□□□□ 0.01
PTPN13-203ENST00000427191 C16orf62Q7Z3J2 963 aa15.12■□□□□ 0.01
PTPN13-203ENST00000427191 PSMC5P62195 406 aa15.12■□□□□ 0.01
PTPN13-203ENST00000427191 TMEM154Q6P9G4 183 aa15.12■□□□□ 0.01
PTPN13-203ENST00000427191 RMDN3Q96TC7 470 aa15.12■□□□□ 0.01
PTPN13-203ENST00000427191 ZSWIM5Q9P217 1185 aa15.12■□□□□ 0.01
PTPN13-203ENST00000427191 NPM3O75607 178 aaKnown RBP15.12■□□□□ 0.01
PTPN13-203ENST00000427191 RRM2P31350 389 aa15.12■□□□□ 0.01
PTPN13-203ENST00000427191 GCLMP48507 274 aa15.12■□□□□ 0.01
PTPN13-203ENST00000427191 CDK8P49336 464 aa15.12■□□□□ 0.01
PTPN13-203ENST00000427191 ACTN3Q08043 901 aaPredicted RBP15.12■□□□□ 0.01
PTPN13-203ENST00000427191 C1DQ13901 141 aaKnown RBP15.12■□□□□ 0.01
PTPN13-203ENST00000427191 RCSD1Q6JBY9 416 aa15.12■□□□□ 0.01
PTPN13-203ENST00000427191 INTS2Q9H0H0 1204 aaKnown RBP15.12■□□□□ 0.01
PTPN13-203ENST00000427191 NPHS2Q9NP85 383 aa15.12■□□□□ 0.01
PTPN13-203ENST00000427191 UBN2Q6ZU65 1347 aa15.12■□□□□ 0.01
PTPN13-203ENST00000427191 SSU72P8A0A1W2PR75 194 aa15.12■□□□□ 0.01
PTPN13-203ENST00000427191 CTTNQ14247 550 aaKnown RBP15.12■□□□□ 0.01
PTPN13-203ENST00000427191 PHKG1Q16816 387 aa15.12■□□□□ 0.01
PTPN13-203ENST00000427191 ARHGAP17Q68EM7 881 aa15.12■□□□□ 0.01
PTPN13-203ENST00000427191 ARL8AQ96BM9 186 aa15.12■□□□□ 0.01
PTPN13-203ENST00000427191 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.12■□□□□ 0.01
PTPN13-203ENST00000427191 PDXKO00764 312 aa15.12■□□□□ 0.01
PTPN13-203ENST00000427191 KCNN4O15554 427 aa15.12■□□□□ 0.01
PTPN13-203ENST00000427191 USP1O94782 785 aa15.12■□□□□ 0.01
PTPN13-203ENST00000427191 JAK1P23458 1154 aa15.12■□□□□ 0.01
PTPN13-203ENST00000427191 ACADSBP45954 432 aa15.12■□□□□ 0.01
PTPN13-203ENST00000427191 CENPCQ03188 943 aa15.12■□□□□ 0.01
PTPN13-203ENST00000427191 RTL3Q8N8U3 475 aaKnown RBP15.12■□□□□ 0.01
PTPN13-203ENST00000427191 HIC2Q96JB3 615 aa15.12■□□□□ 0.01
PTPN13-203ENST00000427191 STK33Q9BYT3 514 aa15.12■□□□□ 0.01
PTPN13-203ENST00000427191 SNX12Q9UMY4 172 aa15.12■□□□□ 0.01
PTPN13-203ENST00000427191 ADGRG1Q9Y653 693 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 234 ms