RNA–Protein interactions for RNA: ENST00000427174.5

RPUSD3-205, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 5

Gene RPUSD3, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-205ENST00000427174 PDE11AQ9HCR9 933 aa23.33■■□□□ 1.33
RPUSD3-205ENST00000427174 IRAK3Q9Y616 596 aa23.33■■□□□ 1.33
RPUSD3-205ENST00000427174 SPTBN5Q9NRC6 3674 aaKnown RBP23.33■■□□□ 1.33
RPUSD3-205ENST00000427174 MTCL1Q9Y4B5 1905 aaKnown RBP23.32■■□□□ 1.32
RPUSD3-205ENST00000427174 TSC2P49815 1807 aa23.32■■□□□ 1.32
RPUSD3-205ENST00000427174 PODXLO00592 558 aa23.32■■□□□ 1.32
RPUSD3-205ENST00000427174 XPOTO43592 962 aaKnown RBP23.32■■□□□ 1.32
RPUSD3-205ENST00000427174 NR3C1P04150 777 aa23.32■■□□□ 1.32
RPUSD3-205ENST00000427174 CTSAP10619 480 aa23.32■■□□□ 1.32
RPUSD3-205ENST00000427174 CD44P16070 742 aaKnown RBP23.32■■□□□ 1.32
RPUSD3-205ENST00000427174 GUCY2FP51841 1108 aa23.32■■□□□ 1.32
RPUSD3-205ENST00000427174 ISM2Q6H9L7 571 aa23.32■■□□□ 1.32
RPUSD3-205ENST00000427174 MFSD14AQ96MC6 490 aa23.32■■□□□ 1.32
RPUSD3-205ENST00000427174 NGRNQ9NPE2 291 aaKnown RBP23.32■■□□□ 1.32
RPUSD3-205ENST00000427174 CHST7Q9NS84 486 aa23.32■■□□□ 1.32
RPUSD3-205ENST00000427174 XIRP2A4UGR9 3374 aa23.31■■□□□ 1.32
RPUSD3-205ENST00000427174 PLXNA3P51805 1871 aa23.31■■□□□ 1.32
RPUSD3-205ENST00000427174 PPP1R3GB7ZBB8 358 aa23.31■■□□□ 1.32
RPUSD3-205ENST00000427174 CALUO43852 315 aaPredicted RBP23.31■■□□□ 1.32
RPUSD3-205ENST00000427174 LILRB3O75022 631 aa23.31■■□□□ 1.32
RPUSD3-205ENST00000427174 MCM4P33991 863 aa23.31■■□□□ 1.32
RPUSD3-205ENST00000427174 CYP24A1Q07973 514 aa23.31■■□□□ 1.32
RPUSD3-205ENST00000427174 COL19A1Q14993 1142 aa23.31■■□□□ 1.32
RPUSD3-205ENST00000427174 EDRF1Q3B7T1 1238 aa23.31■■□□□ 1.32
RPUSD3-205ENST00000427174 TCEAL5Q5H9L2 206 aa23.31■■□□□ 1.32
RPUSD3-205ENST00000427174 ADGRD2Q7Z7M1 963 aa23.31■■□□□ 1.32
RPUSD3-205ENST00000427174 TRIML1Q8N9V2 468 aa23.31■■□□□ 1.32
RPUSD3-205ENST00000427174 HASPINQ8TF76 798 aa23.31■■□□□ 1.32
RPUSD3-205ENST00000427174 NUP62CLQ9H1M0 184 aa23.31■■□□□ 1.32
RPUSD3-205ENST00000427174 PTPRJQ12913 1337 aa23.31■■□□□ 1.32
RPUSD3-205ENST00000427174 ANO9A1A5B4 782 aa23.3■■□□□ 1.32
RPUSD3-205ENST00000427174 HIDE1A8MVS5 230 aa23.3■■□□□ 1.32
RPUSD3-205ENST00000427174 BIN1O00499 593 aa23.3■■□□□ 1.32
RPUSD3-205ENST00000427174 EXOC3O60645 756 aa23.3■■□□□ 1.32
RPUSD3-205ENST00000427174 TADA2AO75478 443 aa23.3■■□□□ 1.32
RPUSD3-205ENST00000427174 B3GAT3O94766 335 aa23.3■■□□□ 1.32
RPUSD3-205ENST00000427174 CSPG5O95196 566 aa23.3■■□□□ 1.32
RPUSD3-205ENST00000427174 CASP4P49662 377 aa23.3■■□□□ 1.32
RPUSD3-205ENST00000427174 PSMD6Q15008 389 aa23.3■■□□□ 1.32
RPUSD3-205ENST00000427174 KIAA0319Q5VV43 1072 aa23.3■■□□□ 1.32
RPUSD3-205ENST00000427174 PLPP4Q5VZY2 271 aa23.3■■□□□ 1.32
RPUSD3-205ENST00000427174 TMC7Q7Z402 723 aa23.3■■□□□ 1.32
RPUSD3-205ENST00000427174 MRPL43Q8N983 215 aaKnown RBP23.3■■□□□ 1.32
RPUSD3-205ENST00000427174 RDH13Q8NBN7 331 aa23.3■■□□□ 1.32
RPUSD3-205ENST00000427174 BEST2Q8NFU1 509 aa23.3■■□□□ 1.32
RPUSD3-205ENST00000427174 CXorf38Q8TB03 319 aa23.3■■□□□ 1.32
RPUSD3-205ENST00000427174 NOC3LQ8WTT2 800 aaKnown RBP23.3■■□□□ 1.32
RPUSD3-205ENST00000427174 ENTPD7Q9NQZ7 604 aa23.3■■□□□ 1.32
RPUSD3-205ENST00000427174 SF3B1O75533 1304 aaKnown RBP eCLIP23.3■■□□□ 1.321e-6■■■■■ 66.8
RPUSD3-205ENST00000427174 C2orf71A6NGG8 1288 aa23.29■■□□□ 1.32
RPUSD3-205ENST00000427174 PIRO00625 290 aa23.29■■□□□ 1.32
RPUSD3-205ENST00000427174 PPEF2O14830 753 aa23.29■■□□□ 1.32
RPUSD3-205ENST00000427174 PMS1P54277 932 aaKnown RBP23.29■■□□□ 1.32
RPUSD3-205ENST00000427174 SMC1AQ14683 1233 aaKnown RBP23.29■■□□□ 1.32
RPUSD3-205ENST00000427174 SURF1Q15526 300 aa23.29■■□□□ 1.32
RPUSD3-205ENST00000427174 PTPN14Q15678 1187 aa23.29■■□□□ 1.32
RPUSD3-205ENST00000427174 CCDC85BQ15834 202 aaPredicted RBP23.29■■□□□ 1.32
RPUSD3-205ENST00000427174 ZC3H3Q8IXZ2 948 aaKnown RBP23.29■■□□□ 1.32
RPUSD3-205ENST00000427174 GPR65Q8IYL9 337 aa23.29■■□□□ 1.32
RPUSD3-205ENST00000427174 MICALL1Q8N3F8 863 aa23.29■■□□□ 1.32
RPUSD3-205ENST00000427174 PLEKHO2Q8TD55 490 aa23.29■■□□□ 1.32
RPUSD3-205ENST00000427174 FAM84AQ96KN4 292 aa23.29■■□□□ 1.32
RPUSD3-205ENST00000427174 MAPK13O15264 365 aa23.28■■□□□ 1.32
RPUSD3-205ENST00000427174 SLC34A2O95436 690 aa23.28■■□□□ 1.32
RPUSD3-205ENST00000427174 NR2F2P24468 414 aa23.28■■□□□ 1.32
RPUSD3-205ENST00000427174 PPP1R2P41236 205 aa23.28■■□□□ 1.32
RPUSD3-205ENST00000427174 AARSP49588 968 aaKnown RBP eCLIP23.28■■□□□ 1.32
RPUSD3-205ENST00000427174 MCCD1P59942 119 aaPredicted RBP23.28■■□□□ 1.32
RPUSD3-205ENST00000427174 DSG1Q02413 1049 aa23.28■■□□□ 1.32
RPUSD3-205ENST00000427174 HYAL1Q12794 435 aa23.28■■□□□ 1.32
RPUSD3-205ENST00000427174 ELAVL2Q12926 359 aaKnown RBP23.28■■□□□ 1.32
RPUSD3-205ENST00000427174 C9orf57Q5W0N0 161 aa23.28■■□□□ 1.32
RPUSD3-205ENST00000427174 RBM43Q6ZSC3 357 aaKnown RBP23.28■■□□□ 1.32
RPUSD3-205ENST00000427174 MICAL1Q8TDZ2 1067 aa23.28■■□□□ 1.32
RPUSD3-205ENST00000427174 AUTS2Q8WXX7 1259 aa23.28■■□□□ 1.32
RPUSD3-205ENST00000427174 DHTKD1Q96HY7 919 aaPredicted RBP23.28■■□□□ 1.32
RPUSD3-205ENST00000427174 INTS13Q9NVM9 706 aa23.28■■□□□ 1.32
RPUSD3-205ENST00000427174 DPP3Q9NY33 737 aa23.28■■□□□ 1.32
RPUSD3-205ENST00000427174 UNC80Q8N2C7 3258 aa23.28■■□□□ 1.32
RPUSD3-205ENST00000427174 CXCL14O95715 111 aa23.27■■□□□ 1.32
RPUSD3-205ENST00000427174 MBD3O95983 291 aa23.27■■□□□ 1.32
RPUSD3-205ENST00000427174 FGFR3P22607 806 aa23.27■■□□□ 1.32
RPUSD3-205ENST00000427174 CCNE1P24864 410 aa23.27■■□□□ 1.32
RPUSD3-205ENST00000427174 BRCC3P46736 316 aa23.27■■□□□ 1.32
RPUSD3-205ENST00000427174 GLUD2P49448 558 aa23.27■■□□□ 1.32
RPUSD3-205ENST00000427174 CLDN10P78369 228 aa23.27■■□□□ 1.32
RPUSD3-205ENST00000427174 USP41Q3LFD5 358 aa23.27■■□□□ 1.32
RPUSD3-205ENST00000427174 RTP2Q5QGT7 225 aa23.27■■□□□ 1.32
RPUSD3-205ENST00000427174 ANKRD40Q6AI12 368 aa23.27■■□□□ 1.32
RPUSD3-205ENST00000427174 FOXR2Q6PJQ5 311 aa23.27■■□□□ 1.32
RPUSD3-205ENST00000427174 WDR49Q8IV35 697 aa23.27■■□□□ 1.32
RPUSD3-205ENST00000427174 C1orf127Q8N9H9 656 aa23.27■■□□□ 1.32
RPUSD3-205ENST00000427174 OR5B17Q8NGF7 314 aa23.27■■□□□ 1.32
RPUSD3-205ENST00000427174 B3GALT6Q96L58 329 aa23.27■■□□□ 1.32
RPUSD3-205ENST00000427174 PSMA7O14818 248 aa23.26■■□□□ 1.31
RPUSD3-205ENST00000427174 AKAP3O75969 853 aa23.26■■□□□ 1.31
RPUSD3-205ENST00000427174 GTF2F1P35269 517 aaKnown RBP eCLIP23.26■■□□□ 1.31
RPUSD3-205ENST00000427174 TFAMQ00059 246 aaKnown RBP23.26■■□□□ 1.31
RPUSD3-205ENST00000427174 LRRC63Q05C16 580 aa23.26■■□□□ 1.31
RPUSD3-205ENST00000427174 ADAM9Q13443 819 aa23.26■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms