RNA–Protein interactions for RNA: ENST00000425695.5

HTATSF1-202, Transcript of HIV-1 Tat specific factor 1, humanhuman

TSL 3

Gene HTATSF1, Length 885 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTATSF1-202ENST00000425695 TMEM189-UBE2V1I3L0A0 370 aa27.19■■□□□ 1.94
HTATSF1-202ENST00000425695 RPL17P18621 184 aaKnown RBP27.19■■□□□ 1.94
HTATSF1-202ENST00000425695 RPL9P32969 192 aaKnown RBP27.19■■□□□ 1.94
HTATSF1-202ENST00000425695 ELAVL2Q12926 359 aaKnown RBP27.19■■□□□ 1.94
HTATSF1-202ENST00000425695 SYCE2Q6PIF2 218 aa27.19■■□□□ 1.94
HTATSF1-202ENST00000425695 PPFIBP1Q86W92 1011 aa27.19■■□□□ 1.94
HTATSF1-202ENST00000425695 SAAL1Q96ER3 474 aa27.19■■□□□ 1.94
HTATSF1-202ENST00000425695 PCIF1Q9H4Z3 704 aa27.19■■□□□ 1.94
HTATSF1-202ENST00000425695 RXFP1Q9HBX9 757 aa27.19■■□□□ 1.94
HTATSF1-202ENST00000425695 SLC39A2Q9NP94 309 aa27.19■■□□□ 1.94
HTATSF1-202ENST00000425695 GOLGA8IPA6NC78 632 aa27.18■■□□□ 1.94
HTATSF1-202ENST00000425695 GOLGA6L4A6NEF3 574 aa27.18■■□□□ 1.94
HTATSF1-202ENST00000425695 GOLGA8JA6NMD2 632 aa27.18■■□□□ 1.94
HTATSF1-202ENST00000425695 HOXD13P35453 343 aa27.18■■□□□ 1.94
HTATSF1-202ENST00000425695 GUCY2FP51841 1108 aa27.18■■□□□ 1.94
HTATSF1-202ENST00000425695 ZBTB6Q15916 424 aa27.18■■□□□ 1.94
HTATSF1-202ENST00000425695 JADE1Q6IE81 842 aa27.18■■□□□ 1.94
HTATSF1-202ENST00000425695 CRELD2Q6UXH1 353 aaPredicted RBP27.18■■□□□ 1.94
HTATSF1-202ENST00000425695 C12orf76Q8N812 135 aaPredicted RBP27.18■■□□□ 1.94
HTATSF1-202ENST00000425695 SMRP1Q8NCR6 262 aa27.18■■□□□ 1.94
HTATSF1-202ENST00000425695 CBWD1Q9BRT8 395 aa27.18■■□□□ 1.94
HTATSF1-202ENST00000425695 FAM213AQ9BRX8 229 aa27.18■■□□□ 1.94
HTATSF1-202ENST00000425695 ADH1AP07327 375 aa27.17■■□□□ 1.94
HTATSF1-202ENST00000425695 ADRB2P07550 413 aa27.17■■□□□ 1.94
HTATSF1-202ENST00000425695 ANP32AP39687 249 aaKnown RBP27.17■■□□□ 1.94
HTATSF1-202ENST00000425695 CLCN4P51793 760 aa27.17■■□□□ 1.94
HTATSF1-202ENST00000425695 EHHADHQ08426 723 aa27.17■■□□□ 1.94
HTATSF1-202ENST00000425695 KANK3Q6NY19 840 aa27.17■■□□□ 1.94
HTATSF1-202ENST00000425695 EPM2AIP1Q7L775 607 aaPredicted RBP27.17■■□□□ 1.94
HTATSF1-202ENST00000425695 PALB2Q86YC2 1186 aa27.17■■□□□ 1.94
HTATSF1-202ENST00000425695 NELFCDQ8IXH7 590 aa27.17■■□□□ 1.94
HTATSF1-202ENST00000425695 ZNF507Q8TCN5 953 aa27.17■■□□□ 1.94
HTATSF1-202ENST00000425695 UBQLN1Q9UMX0 589 aaKnown RBP27.17■■□□□ 1.94
HTATSF1-202ENST00000425695 USP15Q9Y4E8 981 aaPredicted RBP27.17■■□□□ 1.94
HTATSF1-202ENST00000425695 NUB1Q9Y5A7 615 aa27.17■■□□□ 1.94
HTATSF1-202ENST00000425695 EIF3DO15371 548 aaKnown RBP eCLIP27.16■■□□□ 1.94
HTATSF1-202ENST00000425695 TRAPPC3O43617 180 aa27.16■■□□□ 1.94
HTATSF1-202ENST00000425695 KLRC4O43908 158 aa27.16■■□□□ 1.94
HTATSF1-202ENST00000425695 ZNF202O95125 648 aa27.16■■□□□ 1.94
HTATSF1-202ENST00000425695 NFICP08651 508 aa27.16■■□□□ 1.94
HTATSF1-202ENST00000425695 HOXB8P17481 243 aaPredicted RBP27.16■■□□□ 1.94
HTATSF1-202ENST00000425695 GARTP22102 1010 aa27.16■■□□□ 1.94
HTATSF1-202ENST00000425695 SMAD2Q15796 467 aaKnown RBP27.16■■□□□ 1.94
HTATSF1-202ENST00000425695 ARMCX5Q6P1M9 558 aa27.16■■□□□ 1.94
HTATSF1-202ENST00000425695 CD302Q8IX05 232 aa27.16■■□□□ 1.94
HTATSF1-202ENST00000425695 LNX1Q8TBB1 728 aaPredicted RBP27.16■■□□□ 1.94
HTATSF1-202ENST00000425695 S1PR5Q9H228 398 aa27.16■■□□□ 1.94
HTATSF1-202ENST00000425695 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP27.16■■□□□ 1.94
HTATSF1-202ENST00000425695 NCOR1O75376 2440 aa27.15■■□□□ 1.94
HTATSF1-202ENST00000425695 SPDYE4A6NLX3 237 aa27.15■■□□□ 1.94
HTATSF1-202ENST00000425695 PRR29P0C7W0 189 aa27.15■■□□□ 1.94
HTATSF1-202ENST00000425695 SPATA31D3P0C874 917 aa27.15■■□□□ 1.94
HTATSF1-202ENST00000425695 FGFR3P22607 806 aa27.15■■□□□ 1.94
HTATSF1-202ENST00000425695 TKTP29401 623 aaKnown RBP27.15■■□□□ 1.94
HTATSF1-202ENST00000425695 TMEM132DQ14C87 1099 aa27.15■■□□□ 1.94
HTATSF1-202ENST00000425695 PSMD5Q16401 504 aa27.15■■□□□ 1.94
HTATSF1-202ENST00000425695 KMT5BQ4FZB7 885 aa27.15■■□□□ 1.94
HTATSF1-202ENST00000425695 RARS2Q5T160 578 aaKnown RBP27.15■■□□□ 1.94
HTATSF1-202ENST00000425695 PDZRN4Q6ZMN7 1036 aaPredicted RBP27.15■■□□□ 1.94
HTATSF1-202ENST00000425695 KRBA2Q6ZNG9 492 aa27.15■■□□□ 1.94
HTATSF1-202ENST00000425695 SPATA31D4Q6ZUB0 917 aa27.15■■□□□ 1.94
HTATSF1-202ENST00000425695 SCFD1Q8WVM8 642 aa27.15■■□□□ 1.94
HTATSF1-202ENST00000425695 FBXL18Q96ME1 805 aa27.15■■□□□ 1.94
HTATSF1-202ENST00000425695 EXOC1Q9NV70 894 aa27.15■■□□□ 1.94
HTATSF1-202ENST00000425695 CDH22Q9UJ99 828 aa27.15■■□□□ 1.94
HTATSF1-202ENST00000425695 CIZ1Q9ULV3 898 aaPredicted RBP27.15■■□□□ 1.94
HTATSF1-202ENST00000425695 VWA8A3KMH1 1905 aa27.15■■□□□ 1.94
HTATSF1-202ENST00000425695 XPOTO43592 962 aaKnown RBP27.14■■□□□ 1.94
HTATSF1-202ENST00000425695 CYP3A5P20815 502 aa27.14■■□□□ 1.94
HTATSF1-202ENST00000425695 GPR65Q8IYL9 337 aa27.14■■□□□ 1.94
HTATSF1-202ENST00000425695 BEST2Q8NFU1 509 aa27.14■■□□□ 1.94
HTATSF1-202ENST00000425695 PIK3R5Q8WYR1 880 aa27.14■■□□□ 1.94
HTATSF1-202ENST00000425695 ASB7Q9H672 318 aa27.14■■□□□ 1.94
HTATSF1-202ENST00000425695 FNIP2Q9P278 1114 aa27.14■■□□□ 1.94
HTATSF1-202ENST00000425695 ANK1P16157 1881 aa27.14■■□□□ 1.94
HTATSF1-202ENST00000425695 LDHAP00338 332 aaKnown RBP27.13■■□□□ 1.93
HTATSF1-202ENST00000425695 GLUD1P00367 558 aa27.13■■□□□ 1.93
HTATSF1-202ENST00000425695 WEE2P0C1S8 567 aa27.13■■□□□ 1.93
HTATSF1-202ENST00000425695 MCM4P33991 863 aa27.13■■□□□ 1.93
HTATSF1-202ENST00000425695 SPATA1Q5VX52 437 aa27.13■■□□□ 1.93
HTATSF1-202ENST00000425695 TSPAN18Q96SJ8 248 aa27.13■■□□□ 1.93
HTATSF1-202ENST00000425695 CLSTN3Q9BQT9 956 aa27.13■■□□□ 1.93
HTATSF1-202ENST00000425695 DZANK1Q9NVP4 752 aa27.13■■□□□ 1.93
HTATSF1-202ENST00000425695 PLXNA3P51805 1871 aa27.13■■□□□ 1.93
HTATSF1-202ENST00000425695 C5orf42Q9H799 3197 aa27.12■■□□□ 1.93
HTATSF1-202ENST00000425695 CLIC2O15247 247 aa27.12■■□□□ 1.93
HTATSF1-202ENST00000425695 ADAM12O43184 909 aa27.12■■□□□ 1.93
HTATSF1-202ENST00000425695 EXTL3O43909 919 aa27.12■■□□□ 1.93
HTATSF1-202ENST00000425695 RPN1P04843 607 aaKnown RBP27.12■■□□□ 1.93
HTATSF1-202ENST00000425695 LRPAP1P30533 357 aa27.12■■□□□ 1.93
HTATSF1-202ENST00000425695 CREMQ03060 361 aa27.12■■□□□ 1.93
HTATSF1-202ENST00000425695 STK4Q13043 487 aa27.12■■□□□ 1.93
HTATSF1-202ENST00000425695 CD320Q9NPF0 282 aa27.12■■□□□ 1.93
HTATSF1-202ENST00000425695 MAN1C1Q9NR34 630 aa27.12■■□□□ 1.93
HTATSF1-202ENST00000425695 TNFRSF10AO00220 468 aa27.11■■□□□ 1.93
HTATSF1-202ENST00000425695 PPEF2O14830 753 aa27.11■■□□□ 1.93
HTATSF1-202ENST00000425695 TGFB1I1O43294 461 aa27.11■■□□□ 1.93
HTATSF1-202ENST00000425695 IL18RAPO95256 599 aa27.11■■□□□ 1.93
HTATSF1-202ENST00000425695 SSTR3P32745 418 aaPredicted RBP27.11■■□□□ 1.93
HTATSF1-202ENST00000425695 WNT7BP56706 349 aa27.11■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms