RNA–Protein interactions for RNA: ENST00000425444.1

SGCE-203, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 597 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-203ENST00000425444 TMEM134Q9H6X4 195 aa13.94□□□□□ -0.18
SGCE-203ENST00000425444 MAN1C1Q9NR34 630 aa13.94□□□□□ -0.18
SGCE-203ENST00000425444 SLC2A4RGQ9NR83 387 aa13.94□□□□□ -0.18
SGCE-203ENST00000425444 MRPL17Q9NRX2 175 aaKnown RBP13.94□□□□□ -0.18
SGCE-203ENST00000425444 ARHGAP28Q9P2N2 729 aa13.94□□□□□ -0.18
SGCE-203ENST00000425444 KCNG1Q9UIX4 513 aa13.94□□□□□ -0.18
SGCE-203ENST00000425444 MTMR6Q9Y217 621 aa13.94□□□□□ -0.18
SGCE-203ENST00000425444 TNFSF13BQ9Y275 285 aa13.94□□□□□ -0.18
SGCE-203ENST00000425444 CLIC4Q9Y696 253 aa13.94□□□□□ -0.18
SGCE-203ENST00000425444 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.94□□□□□ -0.18
SGCE-203ENST00000425444 LAMA1P25391 3075 aa13.93□□□□□ -0.18
SGCE-203ENST00000425444 SDK1Q7Z5N4 2213 aa13.93□□□□□ -0.18
SGCE-203ENST00000425444 NPHP3-ACAD11A0A0J9YXS1 232 aa13.93□□□□□ -0.18
SGCE-203ENST00000425444 KANSL1LA0AUZ9 987 aa13.93□□□□□ -0.18
SGCE-203ENST00000425444 CASTOR2A6NHX0 329 aa13.93□□□□□ -0.18
SGCE-203ENST00000425444 STX6O43752 255 aa13.93□□□□□ -0.18
SGCE-203ENST00000425444 THP07101 528 aa13.93□□□□□ -0.18
SGCE-203ENST00000425444 HARSP12081 509 aaKnown RBP13.93□□□□□ -0.18
SGCE-203ENST00000425444 PLS3P13797 630 aa13.93□□□□□ -0.18
SGCE-203ENST00000425444 PLCG1P19174 1290 aa13.93□□□□□ -0.18
SGCE-203ENST00000425444 TXLNAP40222 546 aa13.93□□□□□ -0.18
SGCE-203ENST00000425444 SNW1Q13573 536 aaKnown RBP13.93□□□□□ -0.18
SGCE-203ENST00000425444 UBXN2BQ14CS0 331 aa13.93□□□□□ -0.18
SGCE-203ENST00000425444 KARSQ15046 597 aaKnown RBP13.93□□□□□ -0.18
SGCE-203ENST00000425444 GPBP1Q86WP2 473 aa13.93□□□□□ -0.18
SGCE-203ENST00000425444 GSTCDQ8NEC7 633 aa13.93□□□□□ -0.18
SGCE-203ENST00000425444 CMASQ8NFW8 434 aaPredicted RBP13.93□□□□□ -0.18
SGCE-203ENST00000425444 SPIRE2Q8WWL2 714 aa13.93□□□□□ -0.18
SGCE-203ENST00000425444 RABGGTAQ92696 567 aa13.93□□□□□ -0.18
SGCE-203ENST00000425444 ACO2Q99798 780 aaKnown RBP13.93□□□□□ -0.18
SGCE-203ENST00000425444 TCHPQ9BT92 498 aa13.93□□□□□ -0.18
SGCE-203ENST00000425444 CCDC94Q9BW85 323 aaPredicted RBP13.93□□□□□ -0.18
SGCE-203ENST00000425444 LARSQ9P2J5 1176 aaKnown RBP13.93□□□□□ -0.18
SGCE-203ENST00000425444 DAXXQ9UER7 740 aaPredicted RBP13.93□□□□□ -0.18
SGCE-203ENST00000425444 SSX2IPQ9Y2D8 614 aa13.93□□□□□ -0.18
SGCE-203ENST00000425444 TDRD15B5MCY1 1934 aaKnown RBP13.93□□□□□ -0.18
SGCE-203ENST00000425444 DMXL2Q8TDJ6 3036 aa13.93□□□□□ -0.18
SGCE-203ENST00000425444 F8W810 466 aa13.92□□□□□ -0.18
SGCE-203ENST00000425444 PTGESO14684 152 aa13.92□□□□□ -0.18
SGCE-203ENST00000425444 LILRB5O75023 590 aa13.92□□□□□ -0.18
SGCE-203ENST00000425444 TADA2AO75478 443 aa13.92□□□□□ -0.18
SGCE-203ENST00000425444 FAM13AO94988 1023 aa13.92□□□□□ -0.18
SGCE-203ENST00000425444 MYBP10242 640 aa13.92□□□□□ -0.18
SGCE-203ENST00000425444 LAMP2P13473 410 aa13.92□□□□□ -0.18
SGCE-203ENST00000425444 MARCKSP29966 332 aaPredicted RBP13.92□□□□□ -0.18
SGCE-203ENST00000425444 GLUD2P49448 558 aa13.92□□□□□ -0.18
SGCE-203ENST00000425444 YARSP54577 528 aaKnown RBP13.92□□□□□ -0.18
SGCE-203ENST00000425444 TUSC3Q13454 348 aa13.92□□□□□ -0.18
SGCE-203ENST00000425444 HTR4Q13639 388 aa13.92□□□□□ -0.18
SGCE-203ENST00000425444 HSP90AA2PQ14568 343 aaPredicted RBP13.92□□□□□ -0.18
SGCE-203ENST00000425444 FUT10Q6P4F1 479 aa13.92□□□□□ -0.18
SGCE-203ENST00000425444 TSSK4Q6SA08 328 aa13.92□□□□□ -0.18
SGCE-203ENST00000425444 SMG7Q92540 1137 aaKnown RBP13.92□□□□□ -0.18
SGCE-203ENST00000425444 RAD54LQ92698 747 aa13.92□□□□□ -0.18
SGCE-203ENST00000425444 SNX21Q969T3 373 aa13.92□□□□□ -0.18
SGCE-203ENST00000425444 TARS2Q9BW92 718 aaKnown RBP13.92□□□□□ -0.18
SGCE-203ENST00000425444 CDT1Q9H211 546 aa13.92□□□□□ -0.18
SGCE-203ENST00000425444 ZHX3Q9H4I2 956 aa13.92□□□□□ -0.18
SGCE-203ENST00000425444 ZSCAN16Q9H4T2 348 aaPredicted RBP13.92□□□□□ -0.18
SGCE-203ENST00000425444 ANKFY1Q9P2R3 1169 aa13.92□□□□□ -0.18
SGCE-203ENST00000425444 CACNG4Q9UBN1 327 aa13.92□□□□□ -0.18
SGCE-203ENST00000425444 ADAM28Q9UKQ2 775 aa13.92□□□□□ -0.18
SGCE-203ENST00000425444 RAB23Q9ULC3 237 aa13.92□□□□□ -0.18
SGCE-203ENST00000425444 ODF2LQ9ULJ1 636 aa13.92□□□□□ -0.18
SGCE-203ENST00000425444 MTF2Q9Y483 593 aaPredicted RBP13.92□□□□□ -0.18
SGCE-203ENST00000425444 NUMBLQ9Y6R0 609 aa13.92□□□□□ -0.18
SGCE-203ENST00000425444 F5P12259 2224 aa13.92□□□□□ -0.18
SGCE-203ENST00000425444 ITPR1Q14643 2758 aa13.92□□□□□ -0.18
SGCE-203ENST00000425444 PATJQ8NI35 1801 aa13.92□□□□□ -0.18
SGCE-203ENST00000425444 SMG1Q96Q15 3661 aaKnown RBP13.92□□□□□ -0.18
SGCE-203ENST00000425444 RALGAPA1Q6GYQ0 2036 aa13.91□□□□□ -0.18
SGCE-203ENST00000425444 MAST4O15021 2626 aa13.91□□□□□ -0.18
SGCE-203ENST00000425444 FAM170BA6NMN3 283 aa13.91□□□□□ -0.18
SGCE-203ENST00000425444 ANHXE9PGG2 379 aa13.91□□□□□ -0.18
SGCE-203ENST00000425444 H0YCG3 227 aa13.91□□□□□ -0.18
SGCE-203ENST00000425444 TBCAO75347 108 aaKnown RBP13.91□□□□□ -0.18
SGCE-203ENST00000425444 RFPL2O75678 378 aa13.91□□□□□ -0.18
SGCE-203ENST00000425444 MATR3P43243 847 aaKnown RBP eCLIP13.91□□□□□ -0.182e-7■■■■□ 22.3
SGCE-203ENST00000425444 OSTNP61366 133 aa13.91□□□□□ -0.18
SGCE-203ENST00000425444 GPC5P78333 572 aa13.91□□□□□ -0.18
SGCE-203ENST00000425444 MCM6Q14566 821 aa13.91□□□□□ -0.18
SGCE-203ENST00000425444 PTPAQ15257 358 aa13.91□□□□□ -0.18
SGCE-203ENST00000425444 LPAL2Q16609 132 aa13.91□□□□□ -0.18
SGCE-203ENST00000425444 GLRA4Q5JXX5 417 aa13.91□□□□□ -0.18
SGCE-203ENST00000425444 ELMSAN1Q6PJG2 1045 aa13.91□□□□□ -0.18
SGCE-203ENST00000425444 MPZL3Q6UWV2 235 aa13.91□□□□□ -0.18
SGCE-203ENST00000425444 CYP26C1Q6V0L0 522 aa13.91□□□□□ -0.18
SGCE-203ENST00000425444 GET4Q7L5D6 327 aaPredicted RBP13.91□□□□□ -0.18
SGCE-203ENST00000425444 TAS1R3Q7RTX0 852 aa13.91□□□□□ -0.18
SGCE-203ENST00000425444 CEP120Q8N960 986 aa13.91□□□□□ -0.18
SGCE-203ENST00000425444 HASPINQ8TF76 798 aa13.91□□□□□ -0.18
SGCE-203ENST00000425444 LARP4BQ92615 738 aaKnown RBP13.91□□□□□ -0.18
SGCE-203ENST00000425444 BICD1Q96G01 975 aa13.91□□□□□ -0.18
SGCE-203ENST00000425444 REEP2Q9BRK0 252 aa13.91□□□□□ -0.18
SGCE-203ENST00000425444 PAAF1Q9BRP4 392 aa13.91□□□□□ -0.18
SGCE-203ENST00000425444 TOPORSQ9NS56 1045 aaPredicted RBP13.91□□□□□ -0.18
SGCE-203ENST00000425444 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.91□□□□□ -0.18
SGCE-203ENST00000425444 CCDC39Q9UFE4 941 aa13.91□□□□□ -0.18
SGCE-203ENST00000425444 SRPRBQ9Y5M8 271 aaKnown RBP13.91□□□□□ -0.18
SGCE-203ENST00000425444 SF3B1O75533 1304 aaKnown RBP eCLIP13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms