RNA–Protein interactions for RNA: ENST00000424011.6

CMTM3-202, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CMTM3, Length 2,330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-202ENST00000424011 CNTNAP2Q9UHC6 1331 aa17.73■□□□□ 0.43
CMTM3-202ENST00000424011 TMEM88BA6NKF7 163 aa17.73■□□□□ 0.43
CMTM3-202ENST00000424011 C22orf31O95567 290 aa17.73■□□□□ 0.43
CMTM3-202ENST00000424011 FTLP02792 175 aaPredicted RBP17.73■□□□□ 0.43
CMTM3-202ENST00000424011 EDN1P05305 212 aa17.73■□□□□ 0.43
CMTM3-202ENST00000424011 INSRRP14616 1297 aa17.73■□□□□ 0.43
CMTM3-202ENST00000424011 TMOD1P28289 359 aa17.73■□□□□ 0.43
CMTM3-202ENST00000424011 ADCYAP1R1P41586 468 aa17.73■□□□□ 0.43
CMTM3-202ENST00000424011 MNAT1P51948 309 aa17.73■□□□□ 0.43
CMTM3-202ENST00000424011 HADHBP55084 474 aaKnown RBP17.73■□□□□ 0.43
CMTM3-202ENST00000424011 GPC5P78333 572 aa17.73■□□□□ 0.43
CMTM3-202ENST00000424011 TAF1CQ15572 869 aaPredicted RBP17.73■□□□□ 0.43
CMTM3-202ENST00000424011 WDR49Q8IV35 697 aa17.73■□□□□ 0.43
CMTM3-202ENST00000424011 USP38Q8NB14 1042 aa17.73■□□□□ 0.43
CMTM3-202ENST00000424011 AFG1LQ8WV93 481 aa17.73■□□□□ 0.43
CMTM3-202ENST00000424011 TRAPPC12Q8WVT3 735 aa17.73■□□□□ 0.43
CMTM3-202ENST00000424011 HHIPL1Q96JK4 782 aa17.73■□□□□ 0.43
CMTM3-202ENST00000424011 TINF2Q9BSI4 451 aa17.73■□□□□ 0.43
CMTM3-202ENST00000424011 IMPG2Q9BZV3 1241 aa17.73■□□□□ 0.43
CMTM3-202ENST00000424011 THAP2Q9H0W7 228 aa17.73■□□□□ 0.43
CMTM3-202ENST00000424011 FZD8Q9H461 694 aa17.73■□□□□ 0.43
CMTM3-202ENST00000424011 ZNFX1Q9P2E3 1918 aaKnown RBP17.73■□□□□ 0.43
CMTM3-202ENST00000424011 PHACTR2O75167 634 aa17.72■□□□□ 0.43
CMTM3-202ENST00000424011 HARSP12081 509 aaKnown RBP17.72■□□□□ 0.43
CMTM3-202ENST00000424011 KRT5P13647 590 aa17.72■□□□□ 0.43
CMTM3-202ENST00000424011 TBXAS1P24557 533 aaPredicted RBP17.72■□□□□ 0.43
CMTM3-202ENST00000424011 PHKA2P46019 1235 aa17.72■□□□□ 0.43
CMTM3-202ENST00000424011 PTENP60484 403 aa17.72■□□□□ 0.43
CMTM3-202ENST00000424011 DUSP28Q4G0W2 176 aa17.72■□□□□ 0.43
CMTM3-202ENST00000424011 GLE1Q53GS7 698 aaKnown RBP17.72■□□□□ 0.43
CMTM3-202ENST00000424011 IQSEC1Q6DN90 963 aa17.72■□□□□ 0.43
CMTM3-202ENST00000424011 MPZL3Q6UWV2 235 aa17.72■□□□□ 0.43
CMTM3-202ENST00000424011 ZNF677Q86XU0 584 aa17.72■□□□□ 0.43
CMTM3-202ENST00000424011 KAT2BQ92831 832 aa17.72■□□□□ 0.43
CMTM3-202ENST00000424011 PI4K2AQ9BTU6 479 aa17.72■□□□□ 0.43
CMTM3-202ENST00000424011 AMFRQ9UKV5 643 aa17.72■□□□□ 0.43
CMTM3-202ENST00000424011 PLXNB2O15031 1838 aa17.72■□□□□ 0.43
CMTM3-202ENST00000424011 INO80B-WBP1J3KQ70 363 aa17.72■□□□□ 0.43
CMTM3-202ENST00000424011 TOMM70O94826 608 aa17.72■□□□□ 0.43
CMTM3-202ENST00000424011 ZBTB41Q5SVQ8 909 aa17.72■□□□□ 0.43
CMTM3-202ENST00000424011 ATF7IP2Q5U623 682 aa17.72■□□□□ 0.43
CMTM3-202ENST00000424011 LMBRD2Q68DH5 695 aaPredicted RBP17.72■□□□□ 0.43
CMTM3-202ENST00000424011 ARHGEF26Q96DR7 871 aa17.72■□□□□ 0.43
CMTM3-202ENST00000424011 KRT12Q99456 494 aa17.72■□□□□ 0.43
CMTM3-202ENST00000424011 INO80BQ9C086 356 aaPredicted RBP17.72■□□□□ 0.43
CMTM3-202ENST00000424011 ACBD3Q9H3P7 528 aa17.72■□□□□ 0.43
CMTM3-202ENST00000424011 PLEKHA4Q9H4M7 779 aa17.72■□□□□ 0.43
CMTM3-202ENST00000424011 PRMT7Q9NVM4 692 aaPredicted RBP17.72■□□□□ 0.43
CMTM3-202ENST00000424011 GLI1P08151 1106 aa17.71■□□□□ 0.43
CMTM3-202ENST00000424011 CHRNB2P17787 502 aa17.71■□□□□ 0.43
CMTM3-202ENST00000424011 PROZP22891 400 aa17.71■□□□□ 0.43
CMTM3-202ENST00000424011 HNRNPH1P31943 449 aaKnown RBP17.71■□□□□ 0.43
CMTM3-202ENST00000424011 CLCN3P51790 818 aa17.71■□□□□ 0.43
CMTM3-202ENST00000424011 IRF5Q13568 498 aa17.71■□□□□ 0.43
CMTM3-202ENST00000424011 ACVR2BQ13705 512 aa17.71■□□□□ 0.43
CMTM3-202ENST00000424011 TMEM132AQ24JP5 1023 aa17.71■□□□□ 0.43
CMTM3-202ENST00000424011 ZBTB33Q86T24 672 aa17.71■□□□□ 0.43
CMTM3-202ENST00000424011 NT5DC3Q86UY8 548 aa17.71■□□□□ 0.43
CMTM3-202ENST00000424011 TMEM59LQ9UK28 342 aa17.71■□□□□ 0.43
CMTM3-202ENST00000424011 PCDHB2Q9Y5E7 798 aa17.71■□□□□ 0.43
CMTM3-202ENST00000424011 CCDC189A1A4V9 331 aa17.71■□□□□ 0.43
CMTM3-202ENST00000424011 CEP104O60308 925 aa17.71■□□□□ 0.43
CMTM3-202ENST00000424011 FAM189A1O60320 539 aa17.71■□□□□ 0.43
CMTM3-202ENST00000424011 WNT7BP56706 349 aa17.71■□□□□ 0.43
CMTM3-202ENST00000424011 IGBP1P78318 339 aa17.71■□□□□ 0.43
CMTM3-202ENST00000424011 FMO1Q01740 532 aa17.71■□□□□ 0.43
CMTM3-202ENST00000424011 SREBF2Q12772 1141 aa17.71■□□□□ 0.43
CMTM3-202ENST00000424011 GJC2Q5T442 439 aaPredicted RBP17.71■□□□□ 0.43
CMTM3-202ENST00000424011 SMYD5Q6GMV2 418 aa17.71■□□□□ 0.43
CMTM3-202ENST00000424011 C17orf99Q6UX52 265 aa17.71■□□□□ 0.43
CMTM3-202ENST00000424011 FAM204AQ9H8W3 233 aa17.71■□□□□ 0.43
CMTM3-202ENST00000424011 CPSF3Q9UKF6 684 aaKnown RBP17.71■□□□□ 0.43
CMTM3-202ENST00000424011 PTPRJQ12913 1337 aa17.7■□□□□ 0.42
CMTM3-202ENST00000424011 ZSCAN5CA6NGD5 496 aaPredicted RBP17.7■□□□□ 0.42
CMTM3-202ENST00000424011 H3BRB1 525 aa17.7■□□□□ 0.42
CMTM3-202ENST00000424011 BUB1BO60566 1050 aaPredicted RBP17.7■□□□□ 0.42
CMTM3-202ENST00000424011 VNN1O95497 513 aa17.7■□□□□ 0.42
CMTM3-202ENST00000424011 MMEP08473 750 aa17.7■□□□□ 0.42
CMTM3-202ENST00000424011 AARSP49588 968 aaKnown RBP eCLIP17.7■□□□□ 0.42
CMTM3-202ENST00000424011 SND1Q7KZF4 910 aaKnown RBP eCLIP17.7■□□□□ 0.42
CMTM3-202ENST00000424011 C16orf70Q9BSU1 422 aa17.7■□□□□ 0.42
CMTM3-202ENST00000424011 TUT1Q9H6E5 874 aaKnown RBP17.7■□□□□ 0.42
CMTM3-202ENST00000424011 TNFSF13BQ9Y275 285 aa17.7■□□□□ 0.42
CMTM3-202ENST00000424011 TTLL13PA6NNM8 815 aa17.7■□□□□ 0.42
CMTM3-202ENST00000424011 SYF2O95926 243 aaKnown RBP17.7■□□□□ 0.42
CMTM3-202ENST00000424011 TNFRSF8P28908 595 aa17.7■□□□□ 0.42
CMTM3-202ENST00000424011 TM4SF4P48230 202 aa17.7■□□□□ 0.42
CMTM3-202ENST00000424011 MBTD1Q05BQ5 628 aa17.7■□□□□ 0.42
CMTM3-202ENST00000424011 CUL2Q13617 745 aa17.7■□□□□ 0.42
CMTM3-202ENST00000424011 NCOA4Q13772 614 aa17.7■□□□□ 0.42
CMTM3-202ENST00000424011 DGKDQ16760 1214 aa17.7■□□□□ 0.42
CMTM3-202ENST00000424011 FAM187BQ17R55 369 aa17.7■□□□□ 0.42
CMTM3-202ENST00000424011 DUOXA2Q1HG44 320 aa17.7■□□□□ 0.42
CMTM3-202ENST00000424011 ZNF568Q3ZCX4 644 aa17.7■□□□□ 0.42
CMTM3-202ENST00000424011 IFNLR1Q8IU57 520 aaPredicted RBP17.7■□□□□ 0.42
CMTM3-202ENST00000424011 ACTRT1Q8TDG2 376 aa17.7■□□□□ 0.42
CMTM3-202ENST00000424011 HES6Q96HZ4 224 aa17.7■□□□□ 0.42
CMTM3-202ENST00000424011 PCDHB18PQ96TA0 734 aa17.7■□□□□ 0.42
CMTM3-202ENST00000424011 TACO1Q9BSH4 297 aaKnown RBP17.7■□□□□ 0.42
CMTM3-202ENST00000424011 PTPRHQ9HD43 1115 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms