RNA–Protein interactions for RNA: ENST00000423635.5

CHCHD3-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 1 (best)

Gene CHCHD3, Length 1,310 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-202ENST00000423635 DDX1Q92499 740 aaKnown RBP18.45■□□□□ 0.54
CHCHD3-202ENST00000423635 TCEAL4Q96EI5 215 aa18.45■□□□□ 0.54
CHCHD3-202ENST00000423635 CORO1BQ9BR76 489 aa18.45■□□□□ 0.54
CHCHD3-202ENST00000423635 LARP6Q9BRS8 491 aaKnown RBP18.45■□□□□ 0.54
CHCHD3-202ENST00000423635 GJB4Q9NTQ9 266 aa18.45■□□□□ 0.54
CHCHD3-202ENST00000423635 CHD6Q8TD26 2715 aa18.45■□□□□ 0.54
CHCHD3-202ENST00000423635 WDR27A2RRH5 827 aa18.44■□□□□ 0.54
CHCHD3-202ENST00000423635 CDKL5O76039 1030 aa18.44■□□□□ 0.54
CHCHD3-202ENST00000423635 PAPSS2O95340 614 aaPredicted RBP18.44■□□□□ 0.54
CHCHD3-202ENST00000423635 CCR2P41597 374 aa18.44■□□□□ 0.54
CHCHD3-202ENST00000423635 SATB1Q01826 763 aa18.44■□□□□ 0.54
CHCHD3-202ENST00000423635 GAS6Q14393 721 aa18.44■□□□□ 0.54
CHCHD3-202ENST00000423635 VITQ6UXI7 678 aa18.44■□□□□ 0.54
CHCHD3-202ENST00000423635 SPEM1Q8N4L4 309 aa18.44■□□□□ 0.54
CHCHD3-202ENST00000423635 C3orf58Q8NDZ4 430 aa18.44■□□□□ 0.54
CHCHD3-202ENST00000423635 DEPDC1BQ8WUY9 529 aa18.44■□□□□ 0.54
CHCHD3-202ENST00000423635 SMARCD2Q92925 531 aa18.44■□□□□ 0.54
CHCHD3-202ENST00000423635 CCDC113Q9H0I3 377 aa18.44■□□□□ 0.54
CHCHD3-202ENST00000423635 TRPV4Q9HBA0 871 aa18.44■□□□□ 0.54
CHCHD3-202ENST00000423635 GDAQ9Y2T3 454 aa18.44■□□□□ 0.54
CHCHD3-202ENST00000423635 CYP46A1Q9Y6A2 500 aa18.44■□□□□ 0.54
CHCHD3-202ENST00000423635 PIAS3Q9Y6X2 628 aa18.44■□□□□ 0.54
CHCHD3-202ENST00000423635 COL4A2P08572 1712 aa18.43■□□□□ 0.54
CHCHD3-202ENST00000423635 PRRG1O14668 218 aa18.43■□□□□ 0.54
CHCHD3-202ENST00000423635 GDF9O60383 454 aa18.43■□□□□ 0.54
CHCHD3-202ENST00000423635 PRKCBP05771 671 aa18.43■□□□□ 0.54
CHCHD3-202ENST00000423635 SPATA31C1P0DKV0 1188 aa18.43■□□□□ 0.54
CHCHD3-202ENST00000423635 ATP2B1P20020 1258 aa18.43■□□□□ 0.54
CHCHD3-202ENST00000423635 GDI1P31150 447 aa18.43■□□□□ 0.54
CHCHD3-202ENST00000423635 BRCC3P46736 316 aa18.43■□□□□ 0.54
CHCHD3-202ENST00000423635 MRPL58Q14197 206 aaKnown RBP18.43■□□□□ 0.54
CHCHD3-202ENST00000423635 CALCRLQ16602 461 aa18.43■□□□□ 0.54
CHCHD3-202ENST00000423635 DCAF4L1Q3SXM0 396 aa18.43■□□□□ 0.54
CHCHD3-202ENST00000423635 EEF1DP3Q658K8 133 aa18.43■□□□□ 0.54
CHCHD3-202ENST00000423635 PDZD4Q76G19 769 aaPredicted RBP18.43■□□□□ 0.54
CHCHD3-202ENST00000423635 ZSWIM3Q96MP5 696 aa18.43■□□□□ 0.54
CHCHD3-202ENST00000423635 TM6SF1Q9BZW5 370 aa18.43■□□□□ 0.54
CHCHD3-202ENST00000423635 USP20Q9Y2K6 914 aa18.43■□□□□ 0.54
CHCHD3-202ENST00000423635 STK36Q9NRP7 1315 aa18.43■□□□□ 0.54
CHCHD3-202ENST00000423635 FAM205CA6NFA0 338 aa18.42■□□□□ 0.54
CHCHD3-202ENST00000423635 I3L4J1 428 aa18.42■□□□□ 0.54
CHCHD3-202ENST00000423635 ARNTLO00327 626 aa18.42■□□□□ 0.54
CHCHD3-202ENST00000423635 MOSPD3O75425 235 aa18.42■□□□□ 0.54
CHCHD3-202ENST00000423635 SEC24AO95486 1093 aa18.42■□□□□ 0.54
CHCHD3-202ENST00000423635 EDN1P05305 212 aa18.42■□□□□ 0.54
CHCHD3-202ENST00000423635 NAMPTP43490 491 aa18.42■□□□□ 0.54
CHCHD3-202ENST00000423635 SCRN1Q12765 414 aa18.42■□□□□ 0.54
CHCHD3-202ENST00000423635 PTGDRQ13258 359 aa18.42■□□□□ 0.54
CHCHD3-202ENST00000423635 TMEM132AQ24JP5 1023 aa18.42■□□□□ 0.54
CHCHD3-202ENST00000423635 XKR4Q5GH76 650 aa18.42■□□□□ 0.54
CHCHD3-202ENST00000423635 GLRA4Q5JXX5 417 aa18.42■□□□□ 0.54
CHCHD3-202ENST00000423635 CYP4A22Q5TCH4 519 aa18.42■□□□□ 0.54
CHCHD3-202ENST00000423635 C1orf228Q6PIY5 440 aa18.42■□□□□ 0.54
CHCHD3-202ENST00000423635 LONP2Q86WA8 852 aa18.42■□□□□ 0.54
CHCHD3-202ENST00000423635 MFSD6LQ8IWD5 586 aa18.42■□□□□ 0.54
CHCHD3-202ENST00000423635 BSNDQ8WZ55 320 aa18.42■□□□□ 0.54
CHCHD3-202ENST00000423635 TNFRSF25Q93038 417 aa18.42■□□□□ 0.54
CHCHD3-202ENST00000423635 MSANTD3Q96H12 275 aa18.42■□□□□ 0.54
CHCHD3-202ENST00000423635 MTMR9Q96QG7 549 aa18.42■□□□□ 0.54
CHCHD3-202ENST00000423635 CYP4F11Q9HBI6 524 aa18.42■□□□□ 0.54
CHCHD3-202ENST00000423635 SMIM28A0A1B0GU29 152 aa18.41■□□□□ 0.54
CHCHD3-202ENST00000423635 CHURC1-FNTBB4DL54 471 aa18.41■□□□□ 0.54
CHCHD3-202ENST00000423635 K7ESF4 209 aa18.41■□□□□ 0.54
CHCHD3-202ENST00000423635 ZNF263O14978 683 aa18.41■□□□□ 0.54
CHCHD3-202ENST00000423635 SYN3O14994 580 aa18.41■□□□□ 0.54
CHCHD3-202ENST00000423635 EPB41L2O43491 1005 aaKnown RBP18.41■□□□□ 0.54
CHCHD3-202ENST00000423635 REC8O95072 547 aa18.41■□□□□ 0.54
CHCHD3-202ENST00000423635 CCNE1P24864 410 aa18.41■□□□□ 0.54
CHCHD3-202ENST00000423635 TXKP42681 527 aa18.41■□□□□ 0.54
CHCHD3-202ENST00000423635 FNTBP49356 437 aa18.41■□□□□ 0.54
CHCHD3-202ENST00000423635 EPHA5P54756 1037 aa18.41■□□□□ 0.54
CHCHD3-202ENST00000423635 DMWDQ09019 674 aa18.41■□□□□ 0.54
CHCHD3-202ENST00000423635 NR5A1Q13285 461 aa18.41■□□□□ 0.54
CHCHD3-202ENST00000423635 TPGS2Q68CL5 300 aa18.41■□□□□ 0.54
CHCHD3-202ENST00000423635 ALKAL1Q6UXT8 129 aa18.41■□□□□ 0.54
CHCHD3-202ENST00000423635 GOLGA2P5Q9HBQ8 144 aa18.41■□□□□ 0.54
CHCHD3-202ENST00000423635 TUFT1Q9NNX1 390 aa18.41■□□□□ 0.54
CHCHD3-202ENST00000423635 MAFFQ9ULX9 164 aa18.41■□□□□ 0.54
CHCHD3-202ENST00000423635 INSL5Q9Y5Q6 135 aa18.41■□□□□ 0.54
CHCHD3-202ENST00000423635 TM4SF5O14894 197 aa18.4■□□□□ 0.54
CHCHD3-202ENST00000423635 PMLP29590 882 aa18.4■□□□□ 0.54
CHCHD3-202ENST00000423635 HOXA6P31267 233 aa18.4■□□□□ 0.54
CHCHD3-202ENST00000423635 VIPR2P41587 438 aa18.4■□□□□ 0.54
CHCHD3-202ENST00000423635 LIMK1P53667 647 aa18.4■□□□□ 0.54
CHCHD3-202ENST00000423635 IQCEQ6IPM2 695 aa18.4■□□□□ 0.54
CHCHD3-202ENST00000423635 CENPQQ7L2Z9 268 aaPredicted RBP18.4■□□□□ 0.54
CHCHD3-202ENST00000423635 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.4■□□□□ 0.54
CHCHD3-202ENST00000423635 CATSPER3Q86XQ3 398 aa18.4■□□□□ 0.54
CHCHD3-202ENST00000423635 LEMD2Q8NC56 503 aa18.4■□□□□ 0.54
CHCHD3-202ENST00000423635 DEPTORQ8TB45 409 aa18.4■□□□□ 0.54
CHCHD3-202ENST00000423635 E2F7Q96AV8 911 aa18.4■□□□□ 0.54
CHCHD3-202ENST00000423635 ZNF512Q96ME7 567 aaPredicted RBP18.4■□□□□ 0.54
CHCHD3-202ENST00000423635 NACC1Q96RE7 527 aa18.4■□□□□ 0.54
CHCHD3-202ENST00000423635 ANGPTL2Q9UKU9 493 aa18.4■□□□□ 0.54
CHCHD3-202ENST00000423635 CACNA1GO43497 2377 aa18.39■□□□□ 0.53
CHCHD3-202ENST00000423635 H7C4K7 107 aa18.39■□□□□ 0.53
CHCHD3-202ENST00000423635 CYP11B2P19099 503 aa18.39■□□□□ 0.53
CHCHD3-202ENST00000423635 KRT2P35908 639 aa18.39■□□□□ 0.53
CHCHD3-202ENST00000423635 SHC2P98077 582 aa18.39■□□□□ 0.53
CHCHD3-202ENST00000423635 SOX4Q06945 474 aaPredicted RBP18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms