RNA–Protein interactions for RNA: ENST00000422392.6

CDH1-202, Transcript of cadherin 1, humanhuman

TSL 1 (best) BASIC

Gene CDH1, Length 2,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-202ENST00000422392 CCDC91Q7Z6B0 441 aa16.83■□□□□ 0.28
CDH1-202ENST00000422392 TBC1D1Q86TI0 1168 aaPredicted RBP16.83■□□□□ 0.28
CDH1-202ENST00000422392 SUPT20HQ8NEM7 779 aa16.83■□□□□ 0.28
CDH1-202ENST00000422392 TMC2Q8TDI7 906 aa16.83■□□□□ 0.28
CDH1-202ENST00000422392 SLCO2A1Q92959 643 aa16.83■□□□□ 0.28
CDH1-202ENST00000422392 ROPN1BQ9BZX4 212 aaPredicted RBP16.83■□□□□ 0.28
CDH1-202ENST00000422392 ROPN1Q9HAT0 212 aaPredicted RBP16.83■□□□□ 0.28
CDH1-202ENST00000422392 ANKEF1Q9NU02 776 aa16.83■□□□□ 0.28
CDH1-202ENST00000422392 PGAP2Q9UHJ9 254 aa16.83■□□□□ 0.28
CDH1-202ENST00000422392 ANAPC5Q9UJX4 755 aa16.83■□□□□ 0.28
CDH1-202ENST00000422392 PTPRJQ12913 1337 aa16.83■□□□□ 0.28
CDH1-202ENST00000422392 WDR46O15213 610 aaKnown RBP16.83■□□□□ 0.28
CDH1-202ENST00000422392 SNX3O60493 162 aa16.83■□□□□ 0.28
CDH1-202ENST00000422392 ATF2P15336 505 aa16.83■□□□□ 0.28
CDH1-202ENST00000422392 TNNI1P19237 187 aa16.83■□□□□ 0.28
CDH1-202ENST00000422392 CD58P19256 250 aa16.83■□□□□ 0.28
CDH1-202ENST00000422392 ELF3P78545 371 aaPredicted RBP16.83■□□□□ 0.28
CDH1-202ENST00000422392 PTK6Q13882 451 aa16.83■□□□□ 0.28
CDH1-202ENST00000422392 SCARA3Q6AZY7 606 aa16.83■□□□□ 0.28
CDH1-202ENST00000422392 CROCCP2Q86T23 111 aa16.83■□□□□ 0.28
CDH1-202ENST00000422392 TCP11Q8WWU5 503 aa16.83■□□□□ 0.28
CDH1-202ENST00000422392 P3H4Q92791 437 aa16.83■□□□□ 0.28
CDH1-202ENST00000422392 TIPINQ9BVW5 301 aa16.83■□□□□ 0.28
CDH1-202ENST00000422392 HOMER3Q9NSC5 361 aa16.83■□□□□ 0.28
CDH1-202ENST00000422392 NINJ2Q9NZG7 142 aa16.83■□□□□ 0.28
CDH1-202ENST00000422392 SLC12A4Q9UP95 1085 aa16.83■□□□□ 0.28
CDH1-202ENST00000422392 WNT10BO00744 389 aa16.82■□□□□ 0.28
CDH1-202ENST00000422392 UBOX5O94941 541 aa16.82■□□□□ 0.28
CDH1-202ENST00000422392 DSG3P32926 999 aa16.82■□□□□ 0.28
CDH1-202ENST00000422392 NSFP46459 744 aaKnown RBP16.82■□□□□ 0.28
CDH1-202ENST00000422392 KRT76Q01546 638 aa16.82■□□□□ 0.28
CDH1-202ENST00000422392 GCNT1Q02742 428 aa16.82■□□□□ 0.28
CDH1-202ENST00000422392 BAATQ14032 418 aaPredicted RBP16.82■□□□□ 0.28
CDH1-202ENST00000422392 SWSAP1Q6NVH7 229 aa16.82■□□□□ 0.28
CDH1-202ENST00000422392 DHX37Q8IY37 1157 aaKnown RBP16.82■□□□□ 0.28
CDH1-202ENST00000422392 SERPINB12Q96P63 405 aa16.82■□□□□ 0.28
CDH1-202ENST00000422392 MOV10L1Q9BXT6 1211 aaKnown RBP16.82■□□□□ 0.28
CDH1-202ENST00000422392 XPNPEP1Q9NQW7 623 aa16.82■□□□□ 0.28
CDH1-202ENST00000422392 SEPT9Q9UHD8 586 aaPredicted RBP16.82■□□□□ 0.28
CDH1-202ENST00000422392 PCDHA10Q9Y5I2 948 aa16.82■□□□□ 0.28
CDH1-202ENST00000422392 CLTAP09496 248 aa16.82■□□□□ 0.28
CDH1-202ENST00000422392 UMODL1Q5DID0 1318 aa16.81■□□□□ 0.28
CDH1-202ENST00000422392 RGPD3A6NKT7 1758 aaPredicted RBP16.81■□□□□ 0.28
CDH1-202ENST00000422392 RGPD4Q7Z3J3 1758 aa16.81■□□□□ 0.28
CDH1-202ENST00000422392 COL11A1P12107 1806 aaPredicted RBP16.81■□□□□ 0.28
CDH1-202ENST00000422392 GAS8O95995 478 aa16.81■□□□□ 0.28
CDH1-202ENST00000422392 BRAFP15056 766 aa16.81■□□□□ 0.28
CDH1-202ENST00000422392 SFNP31947 248 aa16.81■□□□□ 0.28
CDH1-202ENST00000422392 NF2P35240 595 aa16.81■□□□□ 0.28
CDH1-202ENST00000422392 NLRP11P59045 1033 aaKnown RBP16.81■□□□□ 0.28
CDH1-202ENST00000422392 MTMR2Q13614 643 aa16.81■□□□□ 0.28
CDH1-202ENST00000422392 ATP13A4Q4VNC1 1196 aa16.81■□□□□ 0.28
CDH1-202ENST00000422392 TDRD10Q5VZ19 366 aaKnown RBP16.81■□□□□ 0.28
CDH1-202ENST00000422392 NLRX1Q86UT6 975 aa16.81■□□□□ 0.28
CDH1-202ENST00000422392 PNMA8AQ86V59 439 aaPredicted RBP16.81■□□□□ 0.28
CDH1-202ENST00000422392 TBC1D31Q96DN5 1066 aa16.81■□□□□ 0.28
CDH1-202ENST00000422392 NSRP1Q9H0G5 558 aaKnown RBP16.81■□□□□ 0.28
CDH1-202ENST00000422392 BAIAP2L1Q9UHR4 511 aa16.81■□□□□ 0.28
CDH1-202ENST00000422392 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.81■□□□□ 0.28
CDH1-202ENST00000422392 CTDP1Q9Y5B0 961 aaPredicted RBP16.81■□□□□ 0.28
CDH1-202ENST00000422392 HLA-DRAP01903 254 aa16.81■□□□□ 0.28
CDH1-202ENST00000422392 TCF4P15884 667 aa16.81■□□□□ 0.28
CDH1-202ENST00000422392 MAP2K2P36507 400 aa16.81■□□□□ 0.28
CDH1-202ENST00000422392 MCCD1P59942 119 aaPredicted RBP16.81■□□□□ 0.28
CDH1-202ENST00000422392 HP1BP3Q5SSJ5 553 aaPredicted RBP16.81■□□□□ 0.28
CDH1-202ENST00000422392 SRRM1Q8IYB3 904 aaKnown RBP16.81■□□□□ 0.28
CDH1-202ENST00000422392 CCDC63Q8NA47 563 aa16.81■□□□□ 0.28
CDH1-202ENST00000422392 GLIS1Q8NBF1 620 aa16.81■□□□□ 0.28
CDH1-202ENST00000422392 ATL2Q8NHH9 583 aa16.81■□□□□ 0.28
CDH1-202ENST00000422392 ZBTB45Q96K62 511 aaPredicted RBP16.81■□□□□ 0.28
CDH1-202ENST00000422392 NCAPGQ9BPX3 1015 aa16.81■□□□□ 0.28
CDH1-202ENST00000422392 PCDHB2Q9Y5E7 798 aa16.81■□□□□ 0.28
CDH1-202ENST00000422392 PI4K2BG5E9Z4 385 aa16.8■□□□□ 0.28
CDH1-202ENST00000422392 MGRN1O60291 552 aa16.8■□□□□ 0.28
CDH1-202ENST00000422392 EGFRP00533 1210 aa16.8■□□□□ 0.28
CDH1-202ENST00000422392 FDX1P10109 184 aa16.8■□□□□ 0.28
CDH1-202ENST00000422392 PIK3CAP42336 1068 aa16.8■□□□□ 0.28
CDH1-202ENST00000422392 KLF1Q13351 362 aaPredicted RBP16.8■□□□□ 0.28
CDH1-202ENST00000422392 ZBTB41Q5SVQ8 909 aa16.8■□□□□ 0.28
CDH1-202ENST00000422392 TMEM270Q6UE05 265 aa16.8■□□□□ 0.28
CDH1-202ENST00000422392 MON1BQ7L1V2 547 aa16.8■□□□□ 0.28
CDH1-202ENST00000422392 FAM83AQ86UY5 434 aa16.8■□□□□ 0.28
CDH1-202ENST00000422392 CCDC60Q8IWA6 550 aaPredicted RBP16.8■□□□□ 0.28
CDH1-202ENST00000422392 SLC17A8Q8NDX2 589 aa16.8■□□□□ 0.28
CDH1-202ENST00000422392 NTPCRQ9BSD7 190 aaKnown RBP16.8■□□□□ 0.28
CDH1-202ENST00000422392 TRAIPQ9BWF2 469 aa16.8■□□□□ 0.28
CDH1-202ENST00000422392 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.8■□□□□ 0.28
CDH1-202ENST00000422392 STBD1O95210 358 aa16.8■□□□□ 0.28
CDH1-202ENST00000422392 GHRHRQ02643 423 aa16.8■□□□□ 0.28
CDH1-202ENST00000422392 MTERF2Q49AM1 385 aa16.8■□□□□ 0.28
CDH1-202ENST00000422392 SEZ6Q53EL9 994 aa16.8■□□□□ 0.28
CDH1-202ENST00000422392 KAZNQ674X7 775 aa16.8■□□□□ 0.28
CDH1-202ENST00000422392 CYP4F22Q6NT55 531 aa16.8■□□□□ 0.28
CDH1-202ENST00000422392 C15orf39Q6ZRI6 1047 aa16.8■□□□□ 0.28
CDH1-202ENST00000422392 ATG4CQ96DT6 458 aa16.8■□□□□ 0.28
CDH1-202ENST00000422392 FNBP1Q96RU3 617 aa16.8■□□□□ 0.28
CDH1-202ENST00000422392 HAPLN2Q9GZV7 340 aa16.8■□□□□ 0.28
CDH1-202ENST00000422392 RPAP3Q9H6T3 665 aaPredicted RBP16.8■□□□□ 0.28
CDH1-202ENST00000422392 YY1AP1Q9H869 796 aa16.8■□□□□ 0.28
CDH1-202ENST00000422392 APOBEC3GQ9HC16 384 aaKnown RBP16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms