RNA–Protein interactions for RNA: ENST00000419378.5

HMGN1-205, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-205ENST00000419378 MGAT3Q09327 533 aa7.78□□□□□ -1.16
HMGN1-205ENST00000419378 TRIM29Q14134 588 aa7.78□□□□□ -1.16
HMGN1-205ENST00000419378 PLEKHG4Q58EX7 1191 aa7.78□□□□□ -1.16
HMGN1-205ENST00000419378 PPM1JQ5JR12 505 aa7.78□□□□□ -1.16
HMGN1-205ENST00000419378 FBXW10Q5XX13 1052 aa7.78□□□□□ -1.16
HMGN1-205ENST00000419378 KRT40Q6A162 431 aa7.78□□□□□ -1.16
HMGN1-205ENST00000419378 RPAINQ86UA6 219 aa7.78□□□□□ -1.16
HMGN1-205ENST00000419378 RSPH3Q86UC2 560 aa7.78□□□□□ -1.16
HMGN1-205ENST00000419378 DIS3L2Q8IYB7 885 aaKnown RBP7.78□□□□□ -1.16
HMGN1-205ENST00000419378 ZSCAN31Q96LW9 406 aaPredicted RBP7.78□□□□□ -1.16
HMGN1-205ENST00000419378 FERD3LQ96RJ6 166 aa7.78□□□□□ -1.16
HMGN1-205ENST00000419378 LLPHQ9BRT6 129 aaKnown RBP7.78□□□□□ -1.16
HMGN1-205ENST00000419378 SRRTQ9BXP5 876 aaKnown RBP7.78□□□□□ -1.16
HMGN1-205ENST00000419378 UNC45AQ9H3U1 944 aa7.78□□□□□ -1.16
HMGN1-205ENST00000419378 DISC1Q9NRI5 854 aa7.78□□□□□ -1.16
HMGN1-205ENST00000419378 CRIM1Q9NZV1 1036 aa7.78□□□□□ -1.16
HMGN1-205ENST00000419378 GABBR1Q9UBS5 961 aa7.78□□□□□ -1.16
HMGN1-205ENST00000419378 DDX25Q9UHL0 483 aaKnown RBP7.78□□□□□ -1.16
HMGN1-205ENST00000419378 MSRAQ9UJ68 235 aa7.78□□□□□ -1.16
HMGN1-205ENST00000419378 STXBP5LQ9Y2K9 1186 aa7.78□□□□□ -1.16
HMGN1-205ENST00000419378 PCDHA2Q9Y5H9 948 aa7.78□□□□□ -1.16
HMGN1-205ENST00000419378 COL1A2P08123 1366 aa7.78□□□□□ -1.16
HMGN1-205ENST00000419378 VCANP13611 3396 aa7.78□□□□□ -1.16
HMGN1-205ENST00000419378 MICAL3Q7RTP6 2002 aa7.78□□□□□ -1.16
HMGN1-205ENST00000419378 WDR81Q562E7 1941 aa7.78□□□□□ -1.16
HMGN1-205ENST00000419378 MYH9P35579 1960 aaKnown RBP7.77□□□□□ -1.17
HMGN1-205ENST00000419378 ABHD14A-ACY1A0A1B0GW23 586 aa7.77□□□□□ -1.17
HMGN1-205ENST00000419378 BTBD18B2RXH4 712 aa7.77□□□□□ -1.17
HMGN1-205ENST00000419378 HBP1O60381 514 aa7.77□□□□□ -1.17
HMGN1-205ENST00000419378 CCNT1O60563 726 aaKnown RBP7.77□□□□□ -1.17
HMGN1-205ENST00000419378 EFCAB14O75071 495 aa7.77□□□□□ -1.17
HMGN1-205ENST00000419378 MYOGP15173 224 aa7.77□□□□□ -1.17
HMGN1-205ENST00000419378 SFNP31947 248 aa7.77□□□□□ -1.17
HMGN1-205ENST00000419378 DEFB103AP81534 67 aa7.77□□□□□ -1.17
HMGN1-205ENST00000419378 MRPS6P82932 125 aaKnown RBP7.77□□□□□ -1.17
HMGN1-205ENST00000419378 PRKCEQ02156 737 aa7.77□□□□□ -1.17
HMGN1-205ENST00000419378 SOX4Q06945 474 aaPredicted RBP7.77□□□□□ -1.17
HMGN1-205ENST00000419378 UGCGQ16739 394 aa7.77□□□□□ -1.17
HMGN1-205ENST00000419378 ZNF484Q5JVG2 852 aa7.77□□□□□ -1.17
HMGN1-205ENST00000419378 PPP4R3AQ6IN85 833 aa7.77□□□□□ -1.17
HMGN1-205ENST00000419378 FDX2Q6P4F2 183 aa7.77□□□□□ -1.17
HMGN1-205ENST00000419378 MTHFD1LQ6UB35 978 aa7.77□□□□□ -1.17
HMGN1-205ENST00000419378 B3GNT9Q6UX72 402 aa7.77□□□□□ -1.17
HMGN1-205ENST00000419378 TMCO2Q7Z6W1 182 aaPredicted RBP7.77□□□□□ -1.17
HMGN1-205ENST00000419378 HERC6Q8IVU3 1022 aa7.77□□□□□ -1.17
HMGN1-205ENST00000419378 CKAP2LQ8IYA6 745 aa7.77□□□□□ -1.17
HMGN1-205ENST00000419378 DBF4BQ8NFT6 615 aa7.77□□□□□ -1.17
HMGN1-205ENST00000419378 RDM1Q8NG50 284 aa7.77□□□□□ -1.17
HMGN1-205ENST00000419378 PHOSPHO2Q8TCD6 241 aa7.77□□□□□ -1.17
HMGN1-205ENST00000419378 DNAJB3Q8WWF6 145 aa7.77□□□□□ -1.17
HMGN1-205ENST00000419378 TBC1D32Q96NH3 1257 aa7.77□□□□□ -1.17
HMGN1-205ENST00000419378 CDX2Q99626 313 aaPredicted RBP7.77□□□□□ -1.17
HMGN1-205ENST00000419378 NAP1L4Q99733 375 aaKnown RBP7.77□□□□□ -1.17
HMGN1-205ENST00000419378 FAM49AQ9H0Q0 323 aaPredicted RBP7.77□□□□□ -1.17
HMGN1-205ENST00000419378 NKX2-4Q9H2Z4 354 aa7.77□□□□□ -1.17
HMGN1-205ENST00000419378 AKTIPQ9H8T0 292 aa7.77□□□□□ -1.17
HMGN1-205ENST00000419378 KCNMB3Q9NPA1 279 aa7.77□□□□□ -1.17
HMGN1-205ENST00000419378 VAV3Q9UKW4 847 aa7.77□□□□□ -1.17
HMGN1-205ENST00000419378 STRIP2Q9ULQ0 834 aa7.77□□□□□ -1.17
HMGN1-205ENST00000419378 PCDHA11Q9Y5I1 949 aa7.77□□□□□ -1.17
HMGN1-205ENST00000419378 CDY2AQ9Y6F7 541 aa7.77□□□□□ -1.17
HMGN1-205ENST00000419378 REV3LO60673 3130 aa7.76□□□□□ -1.17
HMGN1-205ENST00000419378 SMIM35A0A1B0GVV1 85 aa7.76□□□□□ -1.17
HMGN1-205ENST00000419378 TBX3O15119 743 aa7.76□□□□□ -1.17
HMGN1-205ENST00000419378 STK10O94804 968 aaKnown RBP7.76□□□□□ -1.17
HMGN1-205ENST00000419378 ATE1O95260 518 aa7.76□□□□□ -1.17
HMGN1-205ENST00000419378 HTR3BO95264 441 aa7.76□□□□□ -1.17
HMGN1-205ENST00000419378 TIAF1O95411 115 aa7.76□□□□□ -1.17
HMGN1-205ENST00000419378 C22orf31O95567 290 aa7.76□□□□□ -1.17
HMGN1-205ENST00000419378 RPLP2P05387 115 aaKnown RBP7.76□□□□□ -1.17
HMGN1-205ENST00000419378 CA3P07451 260 aa7.76□□□□□ -1.17
HMGN1-205ENST00000419378 GHRP10912 638 aa7.76□□□□□ -1.17
HMGN1-205ENST00000419378 KLRC1P26715 233 aa7.76□□□□□ -1.17
HMGN1-205ENST00000419378 HMGN5P82970 282 aaKnown RBP7.76□□□□□ -1.17
HMGN1-205ENST00000419378 GUCY1B3Q02153 619 aa7.76□□□□□ -1.17
HMGN1-205ENST00000419378 RING1Q06587 406 aa7.76□□□□□ -1.17
HMGN1-205ENST00000419378 TMEM62Q0P6H9 643 aa7.76□□□□□ -1.17
HMGN1-205ENST00000419378 LPIN1Q14693 890 aa7.76□□□□□ -1.17
HMGN1-205ENST00000419378 FBXO47Q5MNV8 452 aa7.76□□□□□ -1.17
HMGN1-205ENST00000419378 LIN28BQ6ZN17 250 aaKnown RBP eCLIP7.76□□□□□ -1.171e-8■■■□□ 16.2
HMGN1-205ENST00000419378 DYMQ7RTS9 669 aa7.76□□□□□ -1.17
HMGN1-205ENST00000419378 TRMT1LQ7Z2T5 733 aaKnown RBP7.76□□□□□ -1.17
HMGN1-205ENST00000419378 MIER3Q7Z3K6 550 aa7.76□□□□□ -1.17
HMGN1-205ENST00000419378 FAM184AQ8NB25 1140 aa7.76□□□□□ -1.17
HMGN1-205ENST00000419378 MYLIPQ8WY64 445 aa7.76□□□□□ -1.17
HMGN1-205ENST00000419378 SEPT8Q92599 483 aa7.76□□□□□ -1.17
HMGN1-205ENST00000419378 HAS1Q92839 578 aa7.76□□□□□ -1.17
HMGN1-205ENST00000419378 ANAPC16Q96DE5 110 aa7.76□□□□□ -1.17
HMGN1-205ENST00000419378 C8orf76Q96K31 380 aa7.76□□□□□ -1.17
HMGN1-205ENST00000419378 FAM167AQ96KS9 214 aa7.76□□□□□ -1.17
HMGN1-205ENST00000419378 FAM20AQ96MK3 541 aa7.76□□□□□ -1.17
HMGN1-205ENST00000419378 FANCD2OSQ96PS1 177 aa7.76□□□□□ -1.17
HMGN1-205ENST00000419378 IFIH1Q9BYX4 1025 aaKnown RBP7.76□□□□□ -1.17
HMGN1-205ENST00000419378 SLC28A3Q9HAS3 691 aa7.76□□□□□ -1.17
HMGN1-205ENST00000419378 CEP131Q9UPN4 1083 aa7.76□□□□□ -1.17
HMGN1-205ENST00000419378 TRPV2Q9Y5S1 764 aa7.76□□□□□ -1.17
HMGN1-205ENST00000419378 XIRP2A4UGR9 3374 aa7.76□□□□□ -1.17
HMGN1-205ENST00000419378 KIF28PB7ZC32 967 aa7.75□□□□□ -1.17
HMGN1-205ENST00000419378 C9orf172C9J069 976 aa7.75□□□□□ -1.17
HMGN1-205ENST00000419378 M0QZ92 97 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms