RNA–Protein interactions for RNA: ENST00000418170.5

HMGXB4-202, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 4,216 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-202ENST00000418170 CA4P22748 312 aa8.51□□□□□ -1.05
HMGXB4-202ENST00000418170 MAN1A1P33908 653 aa8.51□□□□□ -1.05
HMGXB4-202ENST00000418170 GPC5P78333 572 aa8.51□□□□□ -1.05
HMGXB4-202ENST00000418170 HPCAP84074 193 aa8.51□□□□□ -1.05
HMGXB4-202ENST00000418170 SULT2A1Q06520 285 aa8.51□□□□□ -1.05
HMGXB4-202ENST00000418170 KRT72Q14CN4 511 aa8.51□□□□□ -1.05
HMGXB4-202ENST00000418170 SLC4A8Q2Y0W8 1093 aa8.51□□□□□ -1.05
HMGXB4-202ENST00000418170 TMEM259Q4ZIN3 620 aa8.51□□□□□ -1.05
HMGXB4-202ENST00000418170 C12orf60Q5U649 245 aa8.51□□□□□ -1.05
HMGXB4-202ENST00000418170 CCDC174Q6PII3 467 aa8.51□□□□□ -1.05
HMGXB4-202ENST00000418170 ZNF34Q8IZ26 560 aa8.51□□□□□ -1.05
HMGXB4-202ENST00000418170 IRGQQ8WZA9 623 aa8.51□□□□□ -1.05
HMGXB4-202ENST00000418170 DDX27Q96GQ7 796 aaKnown RBP8.51□□□□□ -1.05
HMGXB4-202ENST00000418170 C9orf72Q96LT7 481 aa8.51□□□□□ -1.05
HMGXB4-202ENST00000418170 AGPAT1Q99943 283 aa8.51□□□□□ -1.05
HMGXB4-202ENST00000418170 PTTG2Q9NZH5 202 aa8.51□□□□□ -1.05
HMGXB4-202ENST00000418170 HEY2Q9UBP5 337 aa8.51□□□□□ -1.05
HMGXB4-202ENST00000418170 PCDHA12Q9UN75 941 aa8.51□□□□□ -1.05
HMGXB4-202ENST00000418170 ARFGEF1Q9Y6D6 1849 aa8.51□□□□□ -1.05
HMGXB4-202ENST00000418170 MAST2Q6P0Q8 1798 aa8.51□□□□□ -1.05
HMGXB4-202ENST00000418170 LTBP1Q14766 1721 aa8.5□□□□□ -1.05
HMGXB4-202ENST00000418170 EXOC1LA0A1B0GW35 172 aa8.5□□□□□ -1.05
HMGXB4-202ENST00000418170 TYROBPO43914 113 aa8.5□□□□□ -1.05
HMGXB4-202ENST00000418170 GAS8O95995 478 aa8.5□□□□□ -1.05
HMGXB4-202ENST00000418170 RARBP10826 455 aa8.5□□□□□ -1.05
HMGXB4-202ENST00000418170 SMARCA1P28370 1054 aa8.5□□□□□ -1.05
HMGXB4-202ENST00000418170 CETN2P41208 172 aa8.5□□□□□ -1.05
HMGXB4-202ENST00000418170 GRIA2P42262 883 aa8.5□□□□□ -1.05
HMGXB4-202ENST00000418170 SLC12A3P55017 1021 aa8.5□□□□□ -1.05
HMGXB4-202ENST00000418170 GRM2Q14416 872 aa8.5□□□□□ -1.05
HMGXB4-202ENST00000418170 KLC3Q6P597 504 aa8.5□□□□□ -1.05
HMGXB4-202ENST00000418170 RFWD2Q8NHY2 731 aa8.5□□□□□ -1.05
HMGXB4-202ENST00000418170 SKA1Q96BD8 255 aa8.5□□□□□ -1.05
HMGXB4-202ENST00000418170 MPP4Q96JB8 637 aa8.5□□□□□ -1.05
HMGXB4-202ENST00000418170 PIGSQ96S52 555 aa8.5□□□□□ -1.05
HMGXB4-202ENST00000418170 NDE1Q9NXR1 346 aa8.5□□□□□ -1.05
HMGXB4-202ENST00000418170 BTG4Q9NY30 223 aa8.5□□□□□ -1.05
HMGXB4-202ENST00000418170 NDUFA13Q9P0J0 144 aa8.5□□□□□ -1.05
HMGXB4-202ENST00000418170 DCTN4Q9UJW0 460 aa8.5□□□□□ -1.05
HMGXB4-202ENST00000418170 A0A0J9YVX5 310 aa8.5□□□□□ -1.05
HMGXB4-202ENST00000418170 POTEB3A0JP26 581 aa8.5□□□□□ -1.05
HMGXB4-202ENST00000418170 POTECB2RU33 542 aa8.5□□□□□ -1.05
HMGXB4-202ENST00000418170 BTBD19C9JJ37 291 aa8.5□□□□□ -1.05
HMGXB4-202ENST00000418170 CLDN3O15551 220 aa8.5□□□□□ -1.05
HMGXB4-202ENST00000418170 MAGEC1O60732 1142 aa8.5□□□□□ -1.05
HMGXB4-202ENST00000418170 IL2RBP14784 551 aa8.5□□□□□ -1.05
HMGXB4-202ENST00000418170 RGS2P41220 211 aa8.5□□□□□ -1.05
HMGXB4-202ENST00000418170 TMEM62Q0P6H9 643 aa8.5□□□□□ -1.05
HMGXB4-202ENST00000418170 ITGA9Q13797 1035 aa8.5□□□□□ -1.05
HMGXB4-202ENST00000418170 BMT2Q1RMZ1 405 aa8.5□□□□□ -1.05
HMGXB4-202ENST00000418170 CFAP157Q5JU67 520 aa8.5□□□□□ -1.05
HMGXB4-202ENST00000418170 POTEBQ6S5H4 581 aa8.5□□□□□ -1.05
HMGXB4-202ENST00000418170 AGBL1Q96MI9 1066 aa8.5□□□□□ -1.05
HMGXB4-202ENST00000418170 CATSPER2Q96P56 530 aa8.5□□□□□ -1.05
HMGXB4-202ENST00000418170 POLR3CQ9BUI4 534 aaPredicted RBP8.5□□□□□ -1.05
HMGXB4-202ENST00000418170 DDX25Q9UHL0 483 aaKnown RBP8.5□□□□□ -1.05
HMGXB4-202ENST00000418170 CHMP2BQ9UQN3 213 aa8.5□□□□□ -1.05
HMGXB4-202ENST00000418170 RAD21O60216 631 aa8.5□□□□□ -1.05
HMGXB4-202ENST00000418170 SERPINB3P29508 390 aa8.5□□□□□ -1.05
HMGXB4-202ENST00000418170 PGM1P36871 562 aa8.5□□□□□ -1.05
HMGXB4-202ENST00000418170 ADCY7P51828 1080 aa8.5□□□□□ -1.05
HMGXB4-202ENST00000418170 PKN2Q16513 984 aaKnown RBP8.5□□□□□ -1.05
HMGXB4-202ENST00000418170 MAPK6Q16659 721 aa8.5□□□□□ -1.05
HMGXB4-202ENST00000418170 C4orf33Q8N1A6 199 aa8.5□□□□□ -1.05
HMGXB4-202ENST00000418170 GRK7Q8WTQ7 553 aa8.5□□□□□ -1.05
HMGXB4-202ENST00000418170 GJA10Q969M2 543 aa8.5□□□□□ -1.05
HMGXB4-202ENST00000418170 DYNLL2Q96FJ2 89 aa8.5□□□□□ -1.05
HMGXB4-202ENST00000418170 OSBPL8Q9BZF1 889 aa8.5□□□□□ -1.05
HMGXB4-202ENST00000418170 MKNK2Q9HBH9 465 aa8.5□□□□□ -1.05
HMGXB4-202ENST00000418170 ZDHHC7Q9NXF8 308 aa8.5□□□□□ -1.05
HMGXB4-202ENST00000418170 PCDHB13Q9Y5F0 798 aa8.5□□□□□ -1.05
HMGXB4-202ENST00000418170 ERVV-1B6SEH8 477 aa8.49□□□□□ -1.05
HMGXB4-202ENST00000418170 hCG_1984214I3L0E3 225 aa8.49□□□□□ -1.05
HMGXB4-202ENST00000418170 SLC26A4O43511 780 aa8.49□□□□□ -1.05
HMGXB4-202ENST00000418170 SPOPO43791 374 aa8.49□□□□□ -1.05
HMGXB4-202ENST00000418170 ESRRAP11474 423 aaPredicted RBP8.49□□□□□ -1.05
HMGXB4-202ENST00000418170 ADCY8P40145 1251 aa8.49□□□□□ -1.05
HMGXB4-202ENST00000418170 FMO5P49326 533 aa8.49□□□□□ -1.05
HMGXB4-202ENST00000418170 CCDC62Q6P9F0 684 aa8.49□□□□□ -1.05
HMGXB4-202ENST00000418170 SFR1Q86XK3 245 aa8.49□□□□□ -1.05
HMGXB4-202ENST00000418170 ZNF713Q8N859 430 aaPredicted RBP8.49□□□□□ -1.05
HMGXB4-202ENST00000418170 DDX51Q8N8A6 666 aaKnown RBP eCLIP8.49□□□□□ -1.05
HMGXB4-202ENST00000418170 SYT2Q8N9I0 419 aaPredicted RBP8.49□□□□□ -1.05
HMGXB4-202ENST00000418170 SLC20A1Q8WUM9 679 aa8.49□□□□□ -1.05
HMGXB4-202ENST00000418170 PSPC1Q8WXF1 523 aaKnown RBP8.49□□□□□ -1.05
HMGXB4-202ENST00000418170 SLX1AQ9BQ83 275 aa8.49□□□□□ -1.05
HMGXB4-202ENST00000418170 CHST7Q9NS84 486 aa8.49□□□□□ -1.05
HMGXB4-202ENST00000418170 APEX2Q9UBZ4 518 aa8.49□□□□□ -1.05
HMGXB4-202ENST00000418170 ASAP1Q9ULH1 1129 aa8.49□□□□□ -1.05
HMGXB4-202ENST00000418170 hCG_2014768A0A024R1R8 64 aa8.49□□□□□ -1.05
HMGXB4-202ENST00000418170 OPHN1O60890 802 aa8.49□□□□□ -1.05
HMGXB4-202ENST00000418170 KRT15P19012 456 aa8.49□□□□□ -1.05
HMGXB4-202ENST00000418170 AP2B1P63010 937 aa8.49□□□□□ -1.05
HMGXB4-202ENST00000418170 TRIP13Q15645 432 aaPredicted RBP8.49□□□□□ -1.05
HMGXB4-202ENST00000418170 DDB1Q16531 1140 aa8.49□□□□□ -1.05
HMGXB4-202ENST00000418170 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.49□□□□□ -1.05
HMGXB4-202ENST00000418170 SPTY2D1Q68D10 685 aaPredicted RBP8.49□□□□□ -1.05
HMGXB4-202ENST00000418170 LVRNQ6Q4G3 990 aa8.49□□□□□ -1.05
HMGXB4-202ENST00000418170 NET1Q7Z628 596 aaPredicted RBP8.49□□□□□ -1.05
HMGXB4-202ENST00000418170 CPNE8Q86YQ8 564 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms