RNA–Protein interactions for RNA: ENST00000417664.6

SSBP3-205, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 1,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-205ENST00000417664 ABCB4P21439 1286 aa18■□□□□ 0.47
SSBP3-205ENST00000417664 LACTBP83111 547 aaPredicted RBP18■□□□□ 0.47
SSBP3-205ENST00000417664 TFAMQ00059 246 aaKnown RBP18■□□□□ 0.47
SSBP3-205ENST00000417664 CFAP221Q4G0U5 840 aa18■□□□□ 0.47
SSBP3-205ENST00000417664 CCDC181Q5TID7 509 aa18■□□□□ 0.47
SSBP3-205ENST00000417664 MMS19Q96T76 1030 aa18■□□□□ 0.47
SSBP3-205ENST00000417664 PCDHB18PQ96TA0 734 aa18■□□□□ 0.47
SSBP3-205ENST00000417664 NIF3L1Q9GZT8 377 aa18■□□□□ 0.47
SSBP3-205ENST00000417664 THAP2Q9H0W7 228 aa18■□□□□ 0.47
SSBP3-205ENST00000417664 NUB1Q9Y5A7 615 aa18■□□□□ 0.47
SSBP3-205ENST00000417664 GPR32O75388 356 aa17.99■□□□□ 0.47
SSBP3-205ENST00000417664 ECM2O94769 699 aaPredicted RBP17.99■□□□□ 0.47
SSBP3-205ENST00000417664 MTA2O94776 668 aa17.99■□□□□ 0.47
SSBP3-205ENST00000417664 CST3P01034 146 aaPredicted RBP17.99■□□□□ 0.47
SSBP3-205ENST00000417664 CYP2C9P11712 490 aa17.99■□□□□ 0.47
SSBP3-205ENST00000417664 AXLP30530 894 aa17.99■□□□□ 0.47
SSBP3-205ENST00000417664 PSMC4P43686 418 aa17.99■□□□□ 0.47
SSBP3-205ENST00000417664 YWHAEP62258 255 aaKnown RBP17.99■□□□□ 0.47
SSBP3-205ENST00000417664 TAF3Q5VWG9 929 aa17.99■□□□□ 0.47
SSBP3-205ENST00000417664 SPOPLQ6IQ16 392 aa17.99■□□□□ 0.47
SSBP3-205ENST00000417664 ACAD10Q6JQN1 1059 aa17.99■□□□□ 0.47
SSBP3-205ENST00000417664 FBXO38Q6PIJ6 1188 aa17.99■□□□□ 0.47
SSBP3-205ENST00000417664 PEX26Q7Z412 305 aa17.99■□□□□ 0.47
SSBP3-205ENST00000417664 DAAM2Q86T65 1068 aa17.99■□□□□ 0.47
SSBP3-205ENST00000417664 NME8Q8N427 588 aa17.99■□□□□ 0.47
SSBP3-205ENST00000417664 TRIM11Q96F44 468 aa17.99■□□□□ 0.47
SSBP3-205ENST00000417664 PBKQ96KB5 322 aa17.99■□□□□ 0.47
SSBP3-205ENST00000417664 CAPZA3Q96KX2 299 aa17.99■□□□□ 0.47
SSBP3-205ENST00000417664 ARID3AQ99856 593 aa17.99■□□□□ 0.47
SSBP3-205ENST00000417664 GTF3C4Q9UKN8 822 aa17.99■□□□□ 0.47
SSBP3-205ENST00000417664 ZNF185O15231 689 aa17.99■□□□□ 0.47
SSBP3-205ENST00000417664 KIF4AO95239 1232 aa17.99■□□□□ 0.47
SSBP3-205ENST00000417664 MYL3P08590 195 aa17.99■□□□□ 0.47
SSBP3-205ENST00000417664 CXCL8P10145 99 aa17.99■□□□□ 0.47
SSBP3-205ENST00000417664 CTGFP29279 349 aa17.99■□□□□ 0.47
SSBP3-205ENST00000417664 HOXC8P31273 242 aa17.99■□□□□ 0.47
SSBP3-205ENST00000417664 CLEC16AQ2KHT3 1053 aa17.99■□□□□ 0.47
SSBP3-205ENST00000417664 EFCAB13Q8IY85 973 aa17.99■□□□□ 0.47
SSBP3-205ENST00000417664 CEP120Q8N960 986 aa17.99■□□□□ 0.47
SSBP3-205ENST00000417664 COG1Q8WTW3 980 aa17.99■□□□□ 0.47
SSBP3-205ENST00000417664 FAM84AQ96KN4 292 aa17.99■□□□□ 0.47
SSBP3-205ENST00000417664 FAM124BQ9H5Z6 455 aaPredicted RBP17.99■□□□□ 0.47
SSBP3-205ENST00000417664 ABCB6Q9NP58 842 aa17.99■□□□□ 0.47
SSBP3-205ENST00000417664 UVRAGQ9P2Y5 699 aa17.99■□□□□ 0.47
SSBP3-205ENST00000417664 C2CD2Q9Y426 696 aa17.99■□□□□ 0.47
SSBP3-205ENST00000417664 PCDHB4Q9Y5E5 795 aa17.99■□□□□ 0.47
SSBP3-205ENST00000417664 NCK2O43639 380 aa17.98■□□□□ 0.47
SSBP3-205ENST00000417664 TFRCP02786 760 aaKnown RBP17.98■□□□□ 0.47
SSBP3-205ENST00000417664 MYBL1P10243 752 aa17.98■□□□□ 0.47
SSBP3-205ENST00000417664 CYBAP13498 195 aa17.98■□□□□ 0.47
SSBP3-205ENST00000417664 ZSCAN20P17040 1043 aaPredicted RBP17.98■□□□□ 0.47
SSBP3-205ENST00000417664 MCM3P25205 808 aa17.98■□□□□ 0.47
SSBP3-205ENST00000417664 ATICP31939 592 aa17.98■□□□□ 0.47
SSBP3-205ENST00000417664 GRM5P41594 1212 aa17.98■□□□□ 0.47
SSBP3-205ENST00000417664 GJA9P57773 515 aa17.98■□□□□ 0.47
SSBP3-205ENST00000417664 MYL6P60660 151 aa17.98■□□□□ 0.47
SSBP3-205ENST00000417664 OSTNP61366 133 aa17.98■□□□□ 0.47
SSBP3-205ENST00000417664 NKX3-2P78367 333 aa17.98■□□□□ 0.47
SSBP3-205ENST00000417664 PURAQ00577 322 aaKnown RBP17.98■□□□□ 0.47
SSBP3-205ENST00000417664 KIZQ2M2Z5 673 aa17.98■□□□□ 0.47
SSBP3-205ENST00000417664 CCDC70Q6NSX1 233 aa17.98■□□□□ 0.47
SSBP3-205ENST00000417664 CDR2LQ86X02 465 aaPredicted RBP17.98■□□□□ 0.47
SSBP3-205ENST00000417664 UBR7Q8N806 425 aa17.98■□□□□ 0.47
SSBP3-205ENST00000417664 CPB2Q96IY4 423 aa17.98■□□□□ 0.47
SSBP3-205ENST00000417664 ACAP3Q96P50 834 aa17.98■□□□□ 0.47
SSBP3-205ENST00000417664 PPP1R16BQ96T49 567 aa17.98■□□□□ 0.47
SSBP3-205ENST00000417664 SELENOOQ9BVL4 669 aa17.98■□□□□ 0.47
SSBP3-205ENST00000417664 PARD6BQ9BYG5 372 aa17.98■□□□□ 0.47
SSBP3-205ENST00000417664 PLEKHA5Q9HAU0 1116 aa17.98■□□□□ 0.47
SSBP3-205ENST00000417664 SPC25Q9HBM1 224 aa17.98■□□□□ 0.47
SSBP3-205ENST00000417664 AMFRQ9UKV5 643 aa17.98■□□□□ 0.47
SSBP3-205ENST00000417664 MROH7Q68CQ1 1323 aa17.97■□□□□ 0.47
SSBP3-205ENST00000417664 C17orf102A2RUQ5 167 aa17.97■□□□□ 0.47
SSBP3-205ENST00000417664 LACTBL1A8MY62 500 aa17.97■□□□□ 0.47
SSBP3-205ENST00000417664 CSDE1O75534 798 aaKnown RBP17.97■□□□□ 0.47
SSBP3-205ENST00000417664 CYP1A2P05177 515 aa17.97■□□□□ 0.47
SSBP3-205ENST00000417664 DARSP14868 501 aaKnown RBP17.97■□□□□ 0.47
SSBP3-205ENST00000417664 ZNF132P52740 706 aa17.97■□□□□ 0.47
SSBP3-205ENST00000417664 BRD3Q15059 726 aa17.97■□□□□ 0.47
SSBP3-205ENST00000417664 ZNF699Q32M78 642 aa17.97■□□□□ 0.47
SSBP3-205ENST00000417664 C11orf63Q6NUN7 778 aa17.97■□□□□ 0.47
SSBP3-205ENST00000417664 TMEM270Q6UE05 265 aa17.97■□□□□ 0.47
SSBP3-205ENST00000417664 PAXIP1Q6ZW49 1069 aaPredicted RBP17.97■□□□□ 0.47
SSBP3-205ENST00000417664 NT5DC3Q86UY8 548 aa17.97■□□□□ 0.47
SSBP3-205ENST00000417664 DNAAF5Q86Y56 855 aa17.97■□□□□ 0.47
SSBP3-205ENST00000417664 MMGT1Q8N4V1 131 aa17.97■□□□□ 0.47
SSBP3-205ENST00000417664 RBBP8NLQ8NC74 664 aaPredicted RBP17.97■□□□□ 0.47
SSBP3-205ENST00000417664 LENG1Q96BZ8 264 aaPredicted RBP17.97■□□□□ 0.47
SSBP3-205ENST00000417664 ZIC5Q96T25 663 aa17.97■□□□□ 0.47
SSBP3-205ENST00000417664 FAM49AQ9H0Q0 323 aaPredicted RBP17.97■□□□□ 0.47
SSBP3-205ENST00000417664 XYLT2Q9H1B5 865 aa17.97■□□□□ 0.47
SSBP3-205ENST00000417664 UPF3AQ9H1J1 476 aaKnown RBP17.97■□□□□ 0.47
SSBP3-205ENST00000417664 VRTNQ9H8Y1 702 aa17.97■□□□□ 0.47
SSBP3-205ENST00000417664 OSGEPQ9NPF4 335 aa17.97■□□□□ 0.47
SSBP3-205ENST00000417664 ACP6Q9NPH0 428 aa17.97■□□□□ 0.47
SSBP3-205ENST00000417664 CTTNBP2NLQ9P2B4 639 aa17.97■□□□□ 0.47
SSBP3-205ENST00000417664 RAB21Q9UL25 225 aa17.97■□□□□ 0.47
SSBP3-205ENST00000417664 STXBP5LQ9Y2K9 1186 aa17.97■□□□□ 0.47
SSBP3-205ENST00000417664 ANK1P16157 1881 aa17.97■□□□□ 0.47
SSBP3-205ENST00000417664 TARSL2A2RTX5 802 aaKnown RBP17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 958.4 ms