RNA–Protein interactions for RNA: ENST00000417496.6

HDAC9-208, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-208ENST00000417496 SNRPFP62306 86 aaKnown RBP15.43■□□□□ 0.06
HDAC9-208ENST00000417496 KRT76Q01546 638 aa15.43■□□□□ 0.06
HDAC9-208ENST00000417496 ZKSCAN8Q15776 578 aaPredicted RBP15.43■□□□□ 0.06
HDAC9-208ENST00000417496 SEZ6Q53EL9 994 aa15.43■□□□□ 0.06
HDAC9-208ENST00000417496 MFSD5Q6N075 450 aa15.43■□□□□ 0.06
HDAC9-208ENST00000417496 GPATCH11Q8N954 259 aa15.43■□□□□ 0.06
HDAC9-208ENST00000417496 ATG4CQ96DT6 458 aa15.43■□□□□ 0.06
HDAC9-208ENST00000417496 ZBTB45Q96K62 511 aaPredicted RBP15.43■□□□□ 0.06
HDAC9-208ENST00000417496 NTPCRQ9BSD7 190 aaKnown RBP15.43■□□□□ 0.06
HDAC9-208ENST00000417496 SEPT9Q9UHD8 586 aaPredicted RBP15.43■□□□□ 0.06
HDAC9-208ENST00000417496 ANAPC5Q9UJX4 755 aa15.43■□□□□ 0.06
HDAC9-208ENST00000417496 CHUKO15111 745 aa15.43■□□□□ 0.06
HDAC9-208ENST00000417496 RGS20O76081 388 aa15.43■□□□□ 0.06
HDAC9-208ENST00000417496 TCF4P15884 667 aa15.43■□□□□ 0.06
HDAC9-208ENST00000417496 NSFP46459 744 aaKnown RBP15.43■□□□□ 0.06
HDAC9-208ENST00000417496 NLRP11P59045 1033 aaKnown RBP15.43■□□□□ 0.06
HDAC9-208ENST00000417496 XRCC4Q13426 336 aa15.43■□□□□ 0.06
HDAC9-208ENST00000417496 E2F5Q15329 346 aa15.43■□□□□ 0.06
HDAC9-208ENST00000417496 ZBTB41Q5SVQ8 909 aa15.43■□□□□ 0.06
HDAC9-208ENST00000417496 NUGGCQ68CJ6 796 aa15.43■□□□□ 0.06
HDAC9-208ENST00000417496 TRPM8Q7Z2W7 1104 aa15.43■□□□□ 0.06
HDAC9-208ENST00000417496 TBC1D1Q86TI0 1168 aaPredicted RBP15.43■□□□□ 0.06
HDAC9-208ENST00000417496 TCP11Q8WWU5 503 aa15.43■□□□□ 0.06
HDAC9-208ENST00000417496 PLVAPQ9BX97 442 aa15.43■□□□□ 0.06
HDAC9-208ENST00000417496 RPAP3Q9H6T3 665 aaPredicted RBP15.43■□□□□ 0.06
HDAC9-208ENST00000417496 PI4K2BG5E9Z4 385 aa15.42■□□□□ 0.06
HDAC9-208ENST00000417496 STBD1O95210 358 aa15.42■□□□□ 0.06
HDAC9-208ENST00000417496 NR3C2P08235 984 aa15.42■□□□□ 0.06
HDAC9-208ENST00000417496 ATF2P15336 505 aa15.42■□□□□ 0.06
HDAC9-208ENST00000417496 SFNP31947 248 aa15.42■□□□□ 0.06
HDAC9-208ENST00000417496 GCNT1Q02742 428 aa15.42■□□□□ 0.06
HDAC9-208ENST00000417496 SNCBQ16143 134 aa15.42■□□□□ 0.06
HDAC9-208ENST00000417496 TDRD10Q5VZ19 366 aaKnown RBP15.42■□□□□ 0.06
HDAC9-208ENST00000417496 CCDC60Q8IWA6 550 aaPredicted RBP15.42■□□□□ 0.06
HDAC9-208ENST00000417496 TIPINQ9BVW5 301 aa15.42■□□□□ 0.06
HDAC9-208ENST00000417496 PCDHB2Q9Y5E7 798 aa15.42■□□□□ 0.06
HDAC9-208ENST00000417496 SNX3O60493 162 aa15.42■□□□□ 0.06
HDAC9-208ENST00000417496 KAZNQ674X7 775 aa15.42■□□□□ 0.06
HDAC9-208ENST00000417496 TMEM270Q6UE05 265 aa15.42■□□□□ 0.06
HDAC9-208ENST00000417496 FAM83AQ86UY5 434 aa15.42■□□□□ 0.06
HDAC9-208ENST00000417496 GLIS1Q8NBF1 620 aa15.42■□□□□ 0.06
HDAC9-208ENST00000417496 SLCO2A1Q92959 643 aa15.42■□□□□ 0.06
HDAC9-208ENST00000417496 TMEM143Q96AN5 459 aa15.42■□□□□ 0.06
HDAC9-208ENST00000417496 ADAM33Q9BZ11 813 aa15.42■□□□□ 0.06
HDAC9-208ENST00000417496 ROPN1BQ9BZX4 212 aaPredicted RBP15.42■□□□□ 0.06
HDAC9-208ENST00000417496 HAPLN2Q9GZV7 340 aa15.42■□□□□ 0.06
HDAC9-208ENST00000417496 STMN4Q9H169 189 aaPredicted RBP15.42■□□□□ 0.06
HDAC9-208ENST00000417496 ROPN1Q9HAT0 212 aaPredicted RBP15.42■□□□□ 0.06
HDAC9-208ENST00000417496 HOMER3Q9NSC5 361 aa15.42■□□□□ 0.06
HDAC9-208ENST00000417496 NINJ2Q9NZG7 142 aa15.42■□□□□ 0.06
HDAC9-208ENST00000417496 ZNFX1Q9P2E3 1918 aaKnown RBP15.41■□□□□ 0.06
HDAC9-208ENST00000417496 UMODL1Q5DID0 1318 aa15.41■□□□□ 0.06
HDAC9-208ENST00000417496 HLA-DRAP01903 254 aa15.41■□□□□ 0.06
HDAC9-208ENST00000417496 CLTAP09496 248 aa15.41■□□□□ 0.06
HDAC9-208ENST00000417496 FDX1P10109 184 aa15.41■□□□□ 0.06
HDAC9-208ENST00000417496 KRT10P13645 584 aa15.41■□□□□ 0.06
HDAC9-208ENST00000417496 BRAFP15056 766 aa15.41■□□□□ 0.06
HDAC9-208ENST00000417496 ELF3P78545 371 aaPredicted RBP15.41■□□□□ 0.06
HDAC9-208ENST00000417496 PTK6Q13882 451 aa15.41■□□□□ 0.06
HDAC9-208ENST00000417496 MTERF2Q49AM1 385 aa15.41■□□□□ 0.06
HDAC9-208ENST00000417496 CYP4F22Q6NT55 531 aa15.41■□□□□ 0.06
HDAC9-208ENST00000417496 PNMA8AQ86V59 439 aaPredicted RBP15.41■□□□□ 0.06
HDAC9-208ENST00000417496 VSIG10LQ86VR7 867 aa15.41■□□□□ 0.06
HDAC9-208ENST00000417496 SRRM1Q8IYB3 904 aaKnown RBP15.41■□□□□ 0.06
HDAC9-208ENST00000417496 ATL2Q8NHH9 583 aa15.41■□□□□ 0.06
HDAC9-208ENST00000417496 FNBP1Q96RU3 617 aa15.41■□□□□ 0.06
HDAC9-208ENST00000417496 POLR3FQ9H1D9 316 aaPredicted RBP15.41■□□□□ 0.06
HDAC9-208ENST00000417496 CCDC134Q9H6E4 229 aa15.41■□□□□ 0.06
HDAC9-208ENST00000417496 APOBEC3GQ9HC16 384 aaKnown RBP15.41■□□□□ 0.06
HDAC9-208ENST00000417496 SLC12A4Q9UP95 1085 aa15.41■□□□□ 0.06
HDAC9-208ENST00000417496 VWA5AO00534 786 aa15.41■□□□□ 0.06
HDAC9-208ENST00000417496 UBOX5O94941 541 aa15.41■□□□□ 0.06
HDAC9-208ENST00000417496 GAS8O95995 478 aa15.41■□□□□ 0.06
HDAC9-208ENST00000417496 ZSCAN5DPP0CG00 497 aa15.41■□□□□ 0.06
HDAC9-208ENST00000417496 GHRP10912 638 aa15.41■□□□□ 0.06
HDAC9-208ENST00000417496 PIK3CAP42336 1068 aa15.41■□□□□ 0.06
HDAC9-208ENST00000417496 LIG4P49917 911 aa15.41■□□□□ 0.06
HDAC9-208ENST00000417496 CXCL9Q07325 125 aa15.41■□□□□ 0.06
HDAC9-208ENST00000417496 ITIH4Q14624 930 aa15.41■□□□□ 0.06
HDAC9-208ENST00000417496 ZFYVE27Q5T4F4 411 aa15.41■□□□□ 0.06
HDAC9-208ENST00000417496 MON1BQ7L1V2 547 aa15.41■□□□□ 0.06
HDAC9-208ENST00000417496 SPIRE2Q8WWL2 714 aa15.41■□□□□ 0.06
HDAC9-208ENST00000417496 ACSF2Q96CM8 615 aaPredicted RBP15.41■□□□□ 0.06
HDAC9-208ENST00000417496 TBC1D31Q96DN5 1066 aa15.41■□□□□ 0.06
HDAC9-208ENST00000417496 SERPINB12Q96P63 405 aa15.41■□□□□ 0.06
HDAC9-208ENST00000417496 KIAA1683Q9H0B3 1180 aa15.41■□□□□ 0.06
HDAC9-208ENST00000417496 RNF146Q9NTX7 359 aa15.41■□□□□ 0.06
HDAC9-208ENST00000417496 BAIAP2L1Q9UHR4 511 aa15.41■□□□□ 0.06
HDAC9-208ENST00000417496 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.41■□□□□ 0.06
HDAC9-208ENST00000417496 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.41■□□□□ 0.06
HDAC9-208ENST00000417496 ZNF541Q9H0D2 1346 aa15.4■□□□□ 0.06
HDAC9-208ENST00000417496 DNAJC8O75937 253 aaPredicted RBP15.4■□□□□ 0.06
HDAC9-208ENST00000417496 VNN1O95497 513 aa15.4■□□□□ 0.06
HDAC9-208ENST00000417496 GTF2H1P32780 548 aa15.4■□□□□ 0.06
HDAC9-208ENST00000417496 RDXP35241 583 aaKnown RBP15.4■□□□□ 0.06
HDAC9-208ENST00000417496 MCCD1P59942 119 aaPredicted RBP15.4■□□□□ 0.06
HDAC9-208ENST00000417496 RPL7AP62424 266 aaKnown RBP15.4■□□□□ 0.06
HDAC9-208ENST00000417496 GHRHRQ02643 423 aa15.4■□□□□ 0.06
HDAC9-208ENST00000417496 KLF1Q13351 362 aaPredicted RBP15.4■□□□□ 0.06
HDAC9-208ENST00000417496 MAMLD1Q13495 774 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms