RNA–Protein interactions for RNA: ENST00000417101.1

ACTB-203, Transcript of actin beta, humanhuman

TSL 4

Gene ACTB, Length 472 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-203ENST00000417101 PABPC1LQ4VXU2 614 aaKnown RBP23.83■■□□□ 1.41
ACTB-203ENST00000417101 VARS2Q5ST30 1063 aaKnown RBP23.83■■□□□ 1.41
ACTB-203ENST00000417101 ARL6IP4Q66PJ3 421 aaKnown RBP23.83■■□□□ 1.41
ACTB-203ENST00000417101 RTL10Q7L3V2 364 aa23.83■■□□□ 1.41
ACTB-203ENST00000417101 ASCL5Q7RTU5 278 aa23.83■■□□□ 1.41
ACTB-203ENST00000417101 FRMD5Q7Z6J6 570 aa23.83■■□□□ 1.41
ACTB-203ENST00000417101 ARHGEF3Q9NR81 526 aa23.83■■□□□ 1.41
ACTB-203ENST00000417101 SLC2A4RGQ9NR83 387 aa23.83■■□□□ 1.41
ACTB-203ENST00000417101 DNMT3BQ9UBC3 853 aaKnown RBP23.83■■□□□ 1.41
ACTB-203ENST00000417101 NUB1Q9Y5A7 615 aa23.83■■□□□ 1.41
ACTB-203ENST00000417101 RIF1Q5UIP0 2472 aaKnown RBP23.83■■□□□ 1.4
ACTB-203ENST00000417101 RPL9P32969 192 aaKnown RBP23.82■■□□□ 1.4
ACTB-203ENST00000417101 ROR1Q01973 937 aa23.82■■□□□ 1.4
ACTB-203ENST00000417101 CACNB1Q02641 598 aaPredicted RBP23.82■■□□□ 1.4
ACTB-203ENST00000417101 ANGPT1Q15389 498 aa23.82■■□□□ 1.4
ACTB-203ENST00000417101 TMEM119Q4V9L6 283 aa23.82■■□□□ 1.4
ACTB-203ENST00000417101 SLC8B1Q6J4K2 584 aa23.82■■□□□ 1.4
ACTB-203ENST00000417101 UPF2Q9HAU5 1272 aaKnown RBP23.82■■□□□ 1.4
ACTB-203ENST00000417101 KCND2Q9NZV8 630 aa23.82■■□□□ 1.4
ACTB-203ENST00000417101 SMC3Q9UQE7 1217 aa23.82■■□□□ 1.4
ACTB-203ENST00000417101 SYN3O14994 580 aa23.81■■□□□ 1.4
ACTB-203ENST00000417101 CLDN3O15551 220 aa23.81■■□□□ 1.4
ACTB-203ENST00000417101 ARPP19P56211 112 aa23.81■■□□□ 1.4
ACTB-203ENST00000417101 GPC5P78333 572 aa23.81■■□□□ 1.4
ACTB-203ENST00000417101 SLC10A6Q3KNW5 377 aa23.81■■□□□ 1.4
ACTB-203ENST00000417101 ARSHQ5FYA8 562 aa23.81■■□□□ 1.4
ACTB-203ENST00000417101 ZPBP2Q6X784 338 aa23.81■■□□□ 1.4
ACTB-203ENST00000417101 MTSS1LQ765P7 747 aa23.81■■□□□ 1.4
ACTB-203ENST00000417101 ZNF461Q8TAF7 563 aa23.81■■□□□ 1.4
ACTB-203ENST00000417101 ING5Q8WYH8 240 aa23.81■■□□□ 1.4
ACTB-203ENST00000417101 KCNH3Q9ULD8 1083 aa23.81■■□□□ 1.4
ACTB-203ENST00000417101 WDR87Q6ZQQ6 2873 aa23.8■■□□□ 1.4
ACTB-203ENST00000417101 PRR23AA6NEV1 266 aa23.8■■□□□ 1.4
ACTB-203ENST00000417101 ELF1P32519 619 aa23.8■■□□□ 1.4
ACTB-203ENST00000417101 MATR3P43243 847 aaKnown RBP eCLIP23.8■■□□□ 1.4
ACTB-203ENST00000417101 MCL1Q07820 350 aa23.8■■□□□ 1.4
ACTB-203ENST00000417101 PHLDB3Q6NSJ2 640 aa23.8■■□□□ 1.4
ACTB-203ENST00000417101 NPAS3Q8IXF0 933 aa23.8■■□□□ 1.4
ACTB-203ENST00000417101 LARSQ9P2J5 1176 aaKnown RBP23.8■■□□□ 1.4
ACTB-203ENST00000417101 MRPS23Q9Y3D9 190 aaKnown RBP23.8■■□□□ 1.4
ACTB-203ENST00000417101 WDR27A2RRH5 827 aa23.79■■□□□ 1.4
ACTB-203ENST00000417101 H7C4K7 107 aa23.79■■□□□ 1.4
ACTB-203ENST00000417101 PRRG1O14668 218 aa23.79■■□□□ 1.4
ACTB-203ENST00000417101 TBC1D4O60343 1298 aa23.79■■□□□ 1.4
ACTB-203ENST00000417101 ABLIM3O94929 683 aa23.79■■□□□ 1.4
ACTB-203ENST00000417101 MCM2P49736 904 aa23.79■■□□□ 1.4
ACTB-203ENST00000417101 SPECC1Q5M775 1068 aa23.79■■□□□ 1.4
ACTB-203ENST00000417101 BICD1Q96G01 975 aa23.79■■□□□ 1.4
ACTB-203ENST00000417101 SUSD3Q96L08 255 aa23.79■■□□□ 1.4
ACTB-203ENST00000417101 AK8Q96MA6 479 aa23.79■■□□□ 1.4
ACTB-203ENST00000417101 HAPLN2Q9GZV7 340 aa23.79■■□□□ 1.4
ACTB-203ENST00000417101 TUBGCP4Q9UGJ1 667 aa23.79■■□□□ 1.4
ACTB-203ENST00000417101 CITO14578 2027 aa23.78■■□□□ 1.4
ACTB-203ENST00000417101 ARHGEF37A1IGU5 675 aa23.78■■□□□ 1.4
ACTB-203ENST00000417101 LRG1P02750 347 aa23.78■■□□□ 1.4
ACTB-203ENST00000417101 DCNP07585 359 aaKnown RBP23.78■■□□□ 1.4
ACTB-203ENST00000417101 RHOP08100 348 aa23.78■■□□□ 1.4
ACTB-203ENST00000417101 CXCL8P10145 99 aa23.78■■□□□ 1.4
ACTB-203ENST00000417101 MCM4P33991 863 aa23.78■■□□□ 1.4
ACTB-203ENST00000417101 UBA7P41226 1012 aa23.78■■□□□ 1.4
ACTB-203ENST00000417101 NCKAP1LP55160 1127 aa23.78■■□□□ 1.4
ACTB-203ENST00000417101 MRPL58Q14197 206 aaKnown RBP23.78■■□□□ 1.4
ACTB-203ENST00000417101 DHX8Q14562 1220 aaKnown RBP23.78■■□□□ 1.4
ACTB-203ENST00000417101 LARP1BQ659C4 914 aaKnown RBP23.78■■□□□ 1.4
ACTB-203ENST00000417101 HAUS6Q7Z4H7 955 aa23.78■■□□□ 1.4
ACTB-203ENST00000417101 GPBP1Q86WP2 473 aa23.78■■□□□ 1.4
ACTB-203ENST00000417101 NKD2Q969F2 451 aaPredicted RBP23.78■■□□□ 1.4
ACTB-203ENST00000417101 CALML4Q96GE6 196 aa23.78■■□□□ 1.4
ACTB-203ENST00000417101 TBC1D32Q96NH3 1257 aa23.78■■□□□ 1.4
ACTB-203ENST00000417101 KXD1Q9BQD3 176 aa23.78■■□□□ 1.4
ACTB-203ENST00000417101 REEP2Q9BRK0 252 aa23.78■■□□□ 1.4
ACTB-203ENST00000417101 FBXL5Q9UKA1 691 aa23.78■■□□□ 1.4
ACTB-203ENST00000417101 SIT1Q9Y3P8 196 aa23.78■■□□□ 1.4
ACTB-203ENST00000417101 H0YCG3 227 aa23.77■■□□□ 1.4
ACTB-203ENST00000417101 CLTAP09496 248 aa23.77■■□□□ 1.4
ACTB-203ENST00000417101 ATF2P15336 505 aa23.77■■□□□ 1.4
ACTB-203ENST00000417101 SPAG1Q07617 926 aa23.77■■□□□ 1.4
ACTB-203ENST00000417101 SLC5A9Q2M3M2 681 aa23.77■■□□□ 1.4
ACTB-203ENST00000417101 CTXN3Q4LDR2 81 aa23.77■■□□□ 1.4
ACTB-203ENST00000417101 TMEM130Q8N3G9 435 aa23.77■■□□□ 1.4
ACTB-203ENST00000417101 LRRC15Q8TF66 581 aa23.77■■□□□ 1.4
ACTB-203ENST00000417101 MCRS1Q96EZ8 462 aa23.77■■□□□ 1.4
ACTB-203ENST00000417101 FOXQ1Q9C009 403 aa23.77■■□□□ 1.4
ACTB-203ENST00000417101 CYP4F11Q9HBI6 524 aa23.77■■□□□ 1.4
ACTB-203ENST00000417101 ODF2LQ9ULJ1 636 aa23.77■■□□□ 1.4
ACTB-203ENST00000417101 ZSCAN21Q9Y5A6 473 aaPredicted RBP23.77■■□□□ 1.4
ACTB-203ENST00000417101 FAM186AA6NE01 2351 aa23.77■■□□□ 1.4
ACTB-203ENST00000417101 MYH11P35749 1972 aa23.76■■□□□ 1.39
ACTB-203ENST00000417101 NOTCH4Q99466 2003 aa23.76■■□□□ 1.39
ACTB-203ENST00000417101 SLC26A4O43511 780 aa23.76■■□□□ 1.39
ACTB-203ENST00000417101 SEC24AO95486 1093 aa23.76■■□□□ 1.39
ACTB-203ENST00000417101 PTPN2P17706 415 aa23.76■■□□□ 1.39
ACTB-203ENST00000417101 SNW1Q13573 536 aaKnown RBP23.76■■□□□ 1.39
ACTB-203ENST00000417101 TCEAL8Q8IYN2 117 aa23.76■■□□□ 1.39
ACTB-203ENST00000417101 APPL2Q8NEU8 664 aa23.76■■□□□ 1.39
ACTB-203ENST00000417101 SHDQ96IW2 340 aa23.76■■□□□ 1.39
ACTB-203ENST00000417101 PLEKHA5Q9HAU0 1116 aa23.76■■□□□ 1.39
ACTB-203ENST00000417101 TTC26A0AVF1 554 aa23.75■■□□□ 1.39
ACTB-203ENST00000417101 CEBPBP17676 345 aa23.75■■□□□ 1.39
ACTB-203ENST00000417101 TNFSF9P41273 254 aa23.75■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms