RNA–Protein interactions for RNA: ENST00000415828.5

CSTF1-202, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 2

Gene CSTF1, Length 1,236 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-202ENST00000415828 EDAQ92838 391 aa6.37□□□□□ -1.39
CSTF1-202ENST00000415828 NKD2Q969F2 451 aaPredicted RBP6.37□□□□□ -1.39
CSTF1-202ENST00000415828 SCLYQ96I15 445 aa6.37□□□□□ -1.39
CSTF1-202ENST00000415828 CARD11Q9BXL7 1154 aa6.37□□□□□ -1.39
CSTF1-202ENST00000415828 NGRNQ9NPE2 291 aaKnown RBP6.37□□□□□ -1.39
CSTF1-202ENST00000415828 USP40Q9NVE5 1235 aa6.37□□□□□ -1.39
CSTF1-202ENST00000415828 TMEM260Q9NX78 707 aa6.37□□□□□ -1.39
CSTF1-202ENST00000415828 ZNF70Q9UC06 446 aaPredicted RBP6.37□□□□□ -1.39
CSTF1-202ENST00000415828 TRMT112Q9UI30 125 aaKnown RBP6.37□□□□□ -1.39
CSTF1-202ENST00000415828 CBLCQ9ULV8 474 aa6.37□□□□□ -1.39
CSTF1-202ENST00000415828 COQ6Q9Y2Z9 468 aa6.37□□□□□ -1.39
CSTF1-202ENST00000415828 MRPL42Q9Y6G3 142 aaKnown RBP6.37□□□□□ -1.39
CSTF1-202ENST00000415828 COL12A1Q99715 3063 aa6.36□□□□□ -1.39
CSTF1-202ENST00000415828 KCNK3O14649 394 aa6.36□□□□□ -1.39
CSTF1-202ENST00000415828 KALRNO60229 2985 aa6.36□□□□□ -1.39
CSTF1-202ENST00000415828 LPXNO60711 386 aa6.36□□□□□ -1.39
CSTF1-202ENST00000415828 LRG1P02750 347 aa6.36□□□□□ -1.39
CSTF1-202ENST00000415828 PDE6AP16499 860 aa6.36□□□□□ -1.39
CSTF1-202ENST00000415828 KLRK1P26718 216 aa6.36□□□□□ -1.39
CSTF1-202ENST00000415828 AVPR2P30518 371 aa6.36□□□□□ -1.39
CSTF1-202ENST00000415828 ADCYAP1R1P41586 468 aa6.36□□□□□ -1.39
CSTF1-202ENST00000415828 RTP5Q14D33 572 aa6.36□□□□□ -1.39
CSTF1-202ENST00000415828 SF3B3Q15393 1217 aaKnown RBP6.36□□□□□ -1.39
CSTF1-202ENST00000415828 GPR19Q15760 415 aa6.36□□□□□ -1.39
CSTF1-202ENST00000415828 C21orf62-AS1Q17RA5 79 aa6.36□□□□□ -1.39
CSTF1-202ENST00000415828 HERC4Q5GLZ8 1057 aaPredicted RBP6.36□□□□□ -1.39
CSTF1-202ENST00000415828 TEPPQ6URK8 271 aa6.36□□□□□ -1.39
CSTF1-202ENST00000415828 TMC5Q6UXY8 1006 aa6.36□□□□□ -1.39
CSTF1-202ENST00000415828 KCTD1Q719H9 257 aa6.36□□□□□ -1.39
CSTF1-202ENST00000415828 PRRT2Q7Z6L0 340 aaPredicted RBP6.36□□□□□ -1.39
CSTF1-202ENST00000415828 PTRH1Q86Y79 214 aaKnown RBP6.36□□□□□ -1.39
CSTF1-202ENST00000415828 HOMER1Q86YM7 354 aa6.36□□□□□ -1.39
CSTF1-202ENST00000415828 CARFQ8N187 725 aa6.36□□□□□ -1.39
CSTF1-202ENST00000415828 ZSWIM3Q96MP5 696 aa6.36□□□□□ -1.39
CSTF1-202ENST00000415828 CLUHP3Q96NS8 147 aa6.36□□□□□ -1.39
CSTF1-202ENST00000415828 THUMPD2Q9BTF0 503 aaKnown RBP6.36□□□□□ -1.39
CSTF1-202ENST00000415828 C11orf84Q9BUA3 381 aaPredicted RBP6.36□□□□□ -1.39
CSTF1-202ENST00000415828 BDH2Q9BUT1 245 aa6.36□□□□□ -1.39
CSTF1-202ENST00000415828 TDRD3Q9H7E2 651 aaKnown RBP6.36□□□□□ -1.39
CSTF1-202ENST00000415828 PCDH18Q9HCL0 1135 aa6.36□□□□□ -1.39
CSTF1-202ENST00000415828 FANCLQ9NW38 375 aa6.36□□□□□ -1.39
CSTF1-202ENST00000415828 SPATA6Q9NWH7 488 aaPredicted RBP6.36□□□□□ -1.39
CSTF1-202ENST00000415828 TELO2Q9Y4R8 837 aa6.36□□□□□ -1.39
CSTF1-202ENST00000415828 ITPR3Q14573 2671 aa6.36□□□□□ -1.39
CSTF1-202ENST00000415828 PTPN13Q12923 2485 aa6.36□□□□□ -1.39
CSTF1-202ENST00000415828 MED23Q9ULK4 1368 aa6.35□□□□□ -1.39
CSTF1-202ENST00000415828 SH3TC1Q8TE82 1336 aa6.35□□□□□ -1.39
CSTF1-202ENST00000415828 TCRBV5S4A2TA0A5A2 114 aa6.35□□□□□ -1.39
CSTF1-202ENST00000415828 MMP14P50281 582 aa6.35□□□□□ -1.39
CSTF1-202ENST00000415828 ITGA1P56199 1179 aa6.35□□□□□ -1.39
CSTF1-202ENST00000415828 JAM2P57087 298 aa6.35□□□□□ -1.39
CSTF1-202ENST00000415828 PAN2Q504Q3 1202 aaKnown RBP6.35□□□□□ -1.39
CSTF1-202ENST00000415828 ANO1Q5XXA6 986 aa6.35□□□□□ -1.39
CSTF1-202ENST00000415828 GADL1Q6ZQY3 521 aa6.35□□□□□ -1.39
CSTF1-202ENST00000415828 FERMT3Q86UX7 667 aa6.35□□□□□ -1.39
CSTF1-202ENST00000415828 JAZF1Q86VZ6 243 aa6.35□□□□□ -1.39
CSTF1-202ENST00000415828 KYQ8NBH2 561 aa6.35□□□□□ -1.39
CSTF1-202ENST00000415828 SH3RF2Q8TEC5 729 aa6.35□□□□□ -1.39
CSTF1-202ENST00000415828 SMCR8Q8TEV9 937 aaPredicted RBP6.35□□□□□ -1.39
CSTF1-202ENST00000415828 APPBP2Q92624 585 aa6.35□□□□□ -1.39
CSTF1-202ENST00000415828 LPAR1Q92633 364 aa6.35□□□□□ -1.39
CSTF1-202ENST00000415828 HNRNPABQ99729 332 aaKnown RBP6.35□□□□□ -1.39
CSTF1-202ENST00000415828 TRIM39Q9HCM9 518 aa6.35□□□□□ -1.39
CSTF1-202ENST00000415828 RBPJLQ9UBG7 517 aa6.35□□□□□ -1.39
CSTF1-202ENST00000415828 NLRC5Q86WI3 1866 aa6.34□□□□□ -1.39
CSTF1-202ENST00000415828 TET1Q8NFU7 2136 aa6.34□□□□□ -1.39
CSTF1-202ENST00000415828 XDHP47989 1333 aa6.34□□□□□ -1.39
CSTF1-202ENST00000415828 CNOT1A5YKK6 2376 aaKnown RBP6.34□□□□□ -1.39
CSTF1-202ENST00000415828 TCRBV16S1A1N1A0A5B0 115 aa6.34□□□□□ -1.39
CSTF1-202ENST00000415828 H3BQ06 376 aaPredicted RBP6.34□□□□□ -1.39
CSTF1-202ENST00000415828 WNT9AO14904 365 aa6.34□□□□□ -1.39
CSTF1-202ENST00000415828 OPA1O60313 960 aa6.34□□□□□ -1.39
CSTF1-202ENST00000415828 PQBP1O60828 265 aaKnown RBP6.34□□□□□ -1.39
CSTF1-202ENST00000415828 CSF2RAP15509 400 aa6.34□□□□□ -1.39
CSTF1-202ENST00000415828 ZKSCAN1P17029 563 aaPredicted RBP6.34□□□□□ -1.39
CSTF1-202ENST00000415828 SARSP49591 514 aaKnown RBP6.34□□□□□ -1.39
CSTF1-202ENST00000415828 RBM5P52756 815 aaKnown RBP eCLIP6.34□□□□□ -1.39
CSTF1-202ENST00000415828 CACNB3P54284 484 aa6.34□□□□□ -1.39
CSTF1-202ENST00000415828 PLP2Q04941 152 aa6.34□□□□□ -1.39
CSTF1-202ENST00000415828 TCEA2Q15560 299 aa6.34□□□□□ -1.39
CSTF1-202ENST00000415828 FNDC3BQ53EP0 1204 aaKnown RBP6.34□□□□□ -1.39
CSTF1-202ENST00000415828 BTBD8Q5XKL5 378 aa6.34□□□□□ -1.39
CSTF1-202ENST00000415828 MIGA2Q7L4E1 593 aa6.34□□□□□ -1.39
CSTF1-202ENST00000415828 NLGN4XQ8N0W4 816 aa6.34□□□□□ -1.39
CSTF1-202ENST00000415828 IGSF22Q8N9C0 903 aa6.34□□□□□ -1.39
CSTF1-202ENST00000415828 TRPV1Q8NER1 839 aa6.34□□□□□ -1.39
CSTF1-202ENST00000415828 ARNTL2Q8WYA1 636 aa6.34□□□□□ -1.39
CSTF1-202ENST00000415828 FAM89AQ96GI7 184 aa6.34□□□□□ -1.39
CSTF1-202ENST00000415828 RIC8BQ9NVN3 520 aa6.34□□□□□ -1.39
CSTF1-202ENST00000415828 FLRT1Q9NZU1 646 aa6.34□□□□□ -1.39
CSTF1-202ENST00000415828 NTMQ9P121 344 aa6.34□□□□□ -1.39
CSTF1-202ENST00000415828 DDX20Q9UHI6 824 aaKnown RBP6.34□□□□□ -1.39
CSTF1-202ENST00000415828 SRPK3Q9UPE1 567 aa6.34□□□□□ -1.39
CSTF1-202ENST00000415828 ATP23Q9Y6H3 246 aa6.34□□□□□ -1.39
CSTF1-202ENST00000415828 CDK5RAP2Q96SN8 1893 aa6.34□□□□□ -1.39
CSTF1-202ENST00000415828 MAN2B1O00754 1011 aa6.33□□□□□ -1.4
CSTF1-202ENST00000415828 NOBOXO60393 691 aa6.33□□□□□ -1.4
CSTF1-202ENST00000415828 CDC45O75419 566 aa6.33□□□□□ -1.4
CSTF1-202ENST00000415828 KRT38O76015 456 aa6.33□□□□□ -1.4
CSTF1-202ENST00000415828 PDGFBP01127 241 aaPredicted RBP6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms