RNA–Protein interactions for RNA: ENST00000415395.6

RFFL-205, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFFL, Length 1,706 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-205ENST00000415395 APEX2Q9UBZ4 518 aa12.43□□□□□ -0.42
RFFL-205ENST00000415395 SCN10AQ9Y5Y9 1956 aa12.43□□□□□ -0.42
RFFL-205ENST00000415395 CNTNAP2Q9UHC6 1331 aa12.43□□□□□ -0.42
RFFL-205ENST00000415395 INO80B-WBP1J3KQ70 363 aa12.42□□□□□ -0.42
RFFL-205ENST00000415395 PALMO75781 387 aa12.42□□□□□ -0.42
RFFL-205ENST00000415395 ERLIN2O94905 339 aa12.42□□□□□ -0.42
RFFL-205ENST00000415395 YY1P25490 414 aa12.42□□□□□ -0.42
RFFL-205ENST00000415395 HOXC8P31273 242 aa12.42□□□□□ -0.42
RFFL-205ENST00000415395 CDR1P51861 262 aa12.42□□□□□ -0.42
RFFL-205ENST00000415395 JAM2P57087 298 aa12.42□□□□□ -0.42
RFFL-205ENST00000415395 ADAM17P78536 824 aa12.42□□□□□ -0.42
RFFL-205ENST00000415395 PRPF4BQ13523 1007 aaKnown RBP12.42□□□□□ -0.42
RFFL-205ENST00000415395 MTMR3Q13615 1198 aa12.42□□□□□ -0.42
RFFL-205ENST00000415395 RAPGEF1Q13905 1077 aa12.42□□□□□ -0.42
RFFL-205ENST00000415395 ARHGEF6Q15052 776 aa12.42□□□□□ -0.42
RFFL-205ENST00000415395 SURF1Q15526 300 aa12.42□□□□□ -0.42
RFFL-205ENST00000415395 ATF7IP2Q5U623 682 aa12.42□□□□□ -0.42
RFFL-205ENST00000415395 EMC10Q5UCC4 262 aa12.42□□□□□ -0.42
RFFL-205ENST00000415395 MPZL3Q6UWV2 235 aa12.42□□□□□ -0.42
RFFL-205ENST00000415395 LMO3Q8TAP4 145 aa12.42□□□□□ -0.42
RFFL-205ENST00000415395 CALR3Q96L12 384 aaKnown RBP12.42□□□□□ -0.42
RFFL-205ENST00000415395 FAM81BQ96LP2 452 aa12.42□□□□□ -0.42
RFFL-205ENST00000415395 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.42□□□□□ -0.42
RFFL-205ENST00000415395 STK33Q9BYT3 514 aa12.42□□□□□ -0.42
RFFL-205ENST00000415395 INO80BQ9C086 356 aaPredicted RBP12.42□□□□□ -0.42
RFFL-205ENST00000415395 TMEM117Q9H0C3 514 aa12.42□□□□□ -0.42
RFFL-205ENST00000415395 ANKFY1Q9P2R3 1169 aa12.42□□□□□ -0.42
RFFL-205ENST00000415395 SRRDQ9UH36 339 aa12.42□□□□□ -0.42
RFFL-205ENST00000415395 TNFSF13BQ9Y275 285 aa12.42□□□□□ -0.42
RFFL-205ENST00000415395 FAM169AQ9Y6X4 670 aa12.42□□□□□ -0.42
RFFL-205ENST00000415395 NDUFAB1O14561 156 aa12.42□□□□□ -0.42
RFFL-205ENST00000415395 ABLIM1O14639 778 aa12.42□□□□□ -0.42
RFFL-205ENST00000415395 OGTO15294 1046 aa12.42□□□□□ -0.42
RFFL-205ENST00000415395 BUB1O43683 1085 aa12.42□□□□□ -0.42
RFFL-205ENST00000415395 ZC3H11AO75152 810 aaKnown RBP eCLIP12.42□□□□□ -0.42
RFFL-205ENST00000415395 EDN1P05305 212 aa12.42□□□□□ -0.42
RFFL-205ENST00000415395 MYL3P08590 195 aa12.42□□□□□ -0.42
RFFL-205ENST00000415395 CCDC172P0C7W6 258 aa12.42□□□□□ -0.42
RFFL-205ENST00000415395 RARBP10826 455 aa12.42□□□□□ -0.42
RFFL-205ENST00000415395 ACTN1P12814 892 aa12.42□□□□□ -0.42
RFFL-205ENST00000415395 CXCR5P32302 372 aa12.42□□□□□ -0.42
RFFL-205ENST00000415395 GCLMP48507 274 aa12.42□□□□□ -0.42
RFFL-205ENST00000415395 GPC3P51654 580 aa12.42□□□□□ -0.42
RFFL-205ENST00000415395 AP3M2P53677 418 aa12.42□□□□□ -0.42
RFFL-205ENST00000415395 NLRP11P59045 1033 aaKnown RBP12.42□□□□□ -0.42
RFFL-205ENST00000415395 PURAQ00577 322 aaKnown RBP12.42□□□□□ -0.42
RFFL-205ENST00000415395 SLC7A5Q01650 507 aa12.42□□□□□ -0.42
RFFL-205ENST00000415395 GUCY2DQ02846 1103 aa12.42□□□□□ -0.42
RFFL-205ENST00000415395 RPS6KA1Q15418 735 aa12.42□□□□□ -0.42
RFFL-205ENST00000415395 CLUL1Q15846 466 aa12.42□□□□□ -0.42
RFFL-205ENST00000415395 KYAT1Q16773 422 aa12.42□□□□□ -0.42
RFFL-205ENST00000415395 CRELD2Q6UXH1 353 aaPredicted RBP12.42□□□□□ -0.42
RFFL-205ENST00000415395 BRSK2Q8IWQ3 736 aa12.42□□□□□ -0.42
RFFL-205ENST00000415395 KIAA0319LQ8IZA0 1049 aa12.42□□□□□ -0.42
RFFL-205ENST00000415395 SYCE1Q8N0S2 351 aa12.42□□□□□ -0.42
RFFL-205ENST00000415395 HDAC7Q8WUI4 952 aa12.42□□□□□ -0.42
RFFL-205ENST00000415395 LENG1Q96BZ8 264 aaPredicted RBP12.42□□□□□ -0.42
RFFL-205ENST00000415395 ZIM3Q96PE6 472 aa12.42□□□□□ -0.42
RFFL-205ENST00000415395 FNBP1Q96RU3 617 aa12.42□□□□□ -0.42
RFFL-205ENST00000415395 HAPLN2Q9GZV7 340 aa12.42□□□□□ -0.42
RFFL-205ENST00000415395 EPB41L5Q9HCM4 733 aa12.42□□□□□ -0.42
RFFL-205ENST00000415395 PTPRHQ9HD43 1115 aa12.42□□□□□ -0.42
RFFL-205ENST00000415395 SETD4Q9NVD3 440 aa12.42□□□□□ -0.42
RFFL-205ENST00000415395 SAGE1Q9NXZ1 904 aa12.42□□□□□ -0.42
RFFL-205ENST00000415395 RBAKQ9NYW8 714 aaPredicted RBP12.42□□□□□ -0.42
RFFL-205ENST00000415395 GGA2Q9UJY4 613 aa12.42□□□□□ -0.42
RFFL-205ENST00000415395 A0A087WZ62 844 aa12.41□□□□□ -0.42
RFFL-205ENST00000415395 CCDC188H7C350 402 aa12.41□□□□□ -0.42
RFFL-205ENST00000415395 NCK2O43639 380 aa12.41□□□□□ -0.42
RFFL-205ENST00000415395 FAM189A1O60320 539 aa12.41□□□□□ -0.42
RFFL-205ENST00000415395 TRPA1O75762 1119 aa12.41□□□□□ -0.42
RFFL-205ENST00000415395 HMGCRP04035 888 aa12.41□□□□□ -0.42
RFFL-205ENST00000415395 GJB1P08034 283 aa12.41□□□□□ -0.42
RFFL-205ENST00000415395 PRKCIP41743 596 aa12.41□□□□□ -0.42
RFFL-205ENST00000415395 NOP2P46087 812 aaKnown RBP12.41□□□□□ -0.42
RFFL-205ENST00000415395 PRMT2P55345 433 aa12.41□□□□□ -0.42
RFFL-205ENST00000415395 CACNB2Q08289 660 aaPredicted RBP12.41□□□□□ -0.42
RFFL-205ENST00000415395 ICE2Q659A1 982 aa12.41□□□□□ -0.42
RFFL-205ENST00000415395 SMYD5Q6GMV2 418 aa12.41□□□□□ -0.42
RFFL-205ENST00000415395 RUFY4Q6ZNE9 571 aa12.41□□□□□ -0.42
RFFL-205ENST00000415395 C15orf39Q6ZRI6 1047 aa12.41□□□□□ -0.42
RFFL-205ENST00000415395 SUGP1Q8IWZ8 645 aaKnown RBP12.41□□□□□ -0.42
RFFL-205ENST00000415395 MICALL1Q8N3F8 863 aa12.41□□□□□ -0.42
RFFL-205ENST00000415395 C3orf20Q8ND61 904 aa12.41□□□□□ -0.42
RFFL-205ENST00000415395 FBXL13Q8NEE6 735 aa12.41□□□□□ -0.42
RFFL-205ENST00000415395 PXYLP1Q8TE99 480 aa12.41□□□□□ -0.42
RFFL-205ENST00000415395 CCDC127Q96BQ5 260 aa12.41□□□□□ -0.42
RFFL-205ENST00000415395 ZBTB45Q96K62 511 aaPredicted RBP12.41□□□□□ -0.42
RFFL-205ENST00000415395 PSMB7Q99436 277 aa12.41□□□□□ -0.42
RFFL-205ENST00000415395 CGRRF1Q99675 332 aa12.41□□□□□ -0.42
RFFL-205ENST00000415395 FDXACB1Q9BRP7 624 aaPredicted RBP12.41□□□□□ -0.42
RFFL-205ENST00000415395 MTG1Q9BT17 334 aaPredicted RBP12.41□□□□□ -0.42
RFFL-205ENST00000415395 ANK1P16157 1881 aa12.41□□□□□ -0.42
RFFL-205ENST00000415395 GRIN2DO15399 1336 aa12.4□□□□□ -0.42
RFFL-205ENST00000415395 GPR25O00155 361 aa12.4□□□□□ -0.42
RFFL-205ENST00000415395 GFPT2O94808 682 aa12.4□□□□□ -0.42
RFFL-205ENST00000415395 VTNP04004 478 aa12.4□□□□□ -0.42
RFFL-205ENST00000415395 RPLP2P05387 115 aaKnown RBP12.4□□□□□ -0.42
RFFL-205ENST00000415395 C6orf222P0C671 652 aaPredicted RBP12.4□□□□□ -0.42
RFFL-205ENST00000415395 FERP16591 822 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms