RNA–Protein interactions for RNA: ENST00000414411.3

DDB1-202, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,904 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-202ENST00000414411 ZNF662Q6ZS27 426 aa10.76□□□□□ -0.69
DDB1-202ENST00000414411 MRPL10Q7Z7H8 261 aaKnown RBP10.76□□□□□ -0.69
DDB1-202ENST00000414411 CCDC170Q8IYT3 715 aa10.76□□□□□ -0.69
DDB1-202ENST00000414411 RPUSD2Q8IZ73 545 aaKnown RBP10.76□□□□□ -0.69
DDB1-202ENST00000414411 GPD1LQ8N335 351 aa10.76□□□□□ -0.69
DDB1-202ENST00000414411 CEP112Q8N8E3 955 aa10.76□□□□□ -0.69
DDB1-202ENST00000414411 CEP120Q8N960 986 aa10.76□□□□□ -0.69
DDB1-202ENST00000414411 SAAL1Q96ER3 474 aa10.76□□□□□ -0.69
DDB1-202ENST00000414411 PCMTD1Q96MG8 357 aaPredicted RBP10.76□□□□□ -0.69
DDB1-202ENST00000414411 MKNK1Q9BUB5 465 aa10.76□□□□□ -0.69
DDB1-202ENST00000414411 NDST4Q9H3R1 872 aa10.76□□□□□ -0.69
DDB1-202ENST00000414411 KIAA1586Q9HCI6 787 aa10.76□□□□□ -0.69
DDB1-202ENST00000414411 IL23AQ9NPF7 189 aa10.76□□□□□ -0.69
DDB1-202ENST00000414411 FAM105AQ9NUU6 356 aa10.76□□□□□ -0.69
DDB1-202ENST00000414411 CPSF3Q9UKF6 684 aaKnown RBP10.76□□□□□ -0.69
DDB1-202ENST00000414411 SIK3Q9Y2K2 1263 aa10.76□□□□□ -0.69
DDB1-202ENST00000414411 PCDHB2Q9Y5E7 798 aa10.76□□□□□ -0.69
DDB1-202ENST00000414411 MICAL3Q7RTP6 2002 aa10.76□□□□□ -0.69
DDB1-202ENST00000414411 CITO14578 2027 aa10.75□□□□□ -0.69
DDB1-202ENST00000414411 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.75□□□□□ -0.69
DDB1-202ENST00000414411 GOLGA8IPA6NC78 632 aa10.75□□□□□ -0.69
DDB1-202ENST00000414411 GOLGA8JA6NMD2 632 aa10.75□□□□□ -0.69
DDB1-202ENST00000414411 MEFVO15553 781 aaPredicted RBP10.75□□□□□ -0.69
DDB1-202ENST00000414411 EXOC3O60645 756 aa10.75□□□□□ -0.69
DDB1-202ENST00000414411 ADRB2P07550 413 aa10.75□□□□□ -0.69
DDB1-202ENST00000414411 PFKMP08237 780 aa10.75□□□□□ -0.69
DDB1-202ENST00000414411 SYN1P17600 705 aa10.75□□□□□ -0.69
DDB1-202ENST00000414411 CYLC1P35663 651 aaPredicted RBP10.75□□□□□ -0.69
DDB1-202ENST00000414411 TNFSF9P41273 254 aa10.75□□□□□ -0.69
DDB1-202ENST00000414411 GRM5P41594 1212 aa10.75□□□□□ -0.69
DDB1-202ENST00000414411 ACOT2P49753 483 aa10.75□□□□□ -0.69
DDB1-202ENST00000414411 MARSP56192 900 aaKnown RBP10.75□□□□□ -0.69
DDB1-202ENST00000414411 KRT83P78385 493 aa10.75□□□□□ -0.69
DDB1-202ENST00000414411 BMS1Q14692 1282 aaKnown RBP10.75□□□□□ -0.69
DDB1-202ENST00000414411 SNRNP35Q16560 246 aaKnown RBP10.75□□□□□ -0.69
DDB1-202ENST00000414411 SEZ6Q53EL9 994 aa10.75□□□□□ -0.69
DDB1-202ENST00000414411 CNKSR3Q6P9H4 555 aa10.75□□□□□ -0.69
DDB1-202ENST00000414411 SLC24A5Q71RS6 500 aa10.75□□□□□ -0.69
DDB1-202ENST00000414411 APBB1IPQ7Z5R6 666 aaPredicted RBP10.75□□□□□ -0.69
DDB1-202ENST00000414411 ZNF598Q86UK7 904 aaKnown RBP10.75□□□□□ -0.69
DDB1-202ENST00000414411 CBWD2Q8IUF1 395 aa10.75□□□□□ -0.69
DDB1-202ENST00000414411 TMEM192Q8IY95 271 aa10.75□□□□□ -0.69
DDB1-202ENST00000414411 THNSL1Q8IYQ7 743 aa10.75□□□□□ -0.69
DDB1-202ENST00000414411 MFSD14AQ96MC6 490 aa10.75□□□□□ -0.69
DDB1-202ENST00000414411 FAM213AQ9BRX8 229 aa10.75□□□□□ -0.69
DDB1-202ENST00000414411 EPC1Q9H2F5 836 aa10.75□□□□□ -0.69
DDB1-202ENST00000414411 TRIM10Q9UDY6 481 aa10.75□□□□□ -0.69
DDB1-202ENST00000414411 ZMYND8Q9ULU4 1186 aaPredicted RBP10.75□□□□□ -0.69
DDB1-202ENST00000414411 IPPQ9Y573 584 aa10.75□□□□□ -0.69
DDB1-202ENST00000414411 FHOD1Q9Y613 1164 aa10.75□□□□□ -0.69
DDB1-202ENST00000414411 EIF3CLB5ME19 914 aaKnown RBP10.74□□□□□ -0.69
DDB1-202ENST00000414411 SLC16A3O15427 465 aaKnown RBP10.74□□□□□ -0.69
DDB1-202ENST00000414411 CLTAP09496 248 aa10.74□□□□□ -0.69
DDB1-202ENST00000414411 STAG3L1P0CL83 205 aa10.74□□□□□ -0.69
DDB1-202ENST00000414411 PNMA6AP0CW24 399 aaPredicted RBP10.74□□□□□ -0.69
DDB1-202ENST00000414411 ATF7P17544 494 aaPredicted RBP10.74□□□□□ -0.69
DDB1-202ENST00000414411 HNRNPH3P31942 346 aaKnown RBP10.74□□□□□ -0.69
DDB1-202ENST00000414411 PSMC2P35998 433 aaKnown RBP10.74□□□□□ -0.69
DDB1-202ENST00000414411 MATR3P43243 847 aaKnown RBP eCLIP10.74□□□□□ -0.69
DDB1-202ENST00000414411 RAB27AP51159 221 aa10.74□□□□□ -0.69
DDB1-202ENST00000414411 EPHB4P54760 987 aa10.74□□□□□ -0.69
DDB1-202ENST00000414411 AMPD2Q01433 879 aa10.74□□□□□ -0.69
DDB1-202ENST00000414411 FPGSQ05932 587 aa10.74□□□□□ -0.69
DDB1-202ENST00000414411 PPIGQ13427 754 aaKnown RBP eCLIP10.74□□□□□ -0.697e-8■■■□□ 17
DDB1-202ENST00000414411 IKBKEQ14164 716 aa10.74□□□□□ -0.69
DDB1-202ENST00000414411 KYAT1Q16773 422 aa10.74□□□□□ -0.69
DDB1-202ENST00000414411 WHAMMP3Q1A5X7 153 aa10.74□□□□□ -0.69
DDB1-202ENST00000414411 ALKAL1Q6UXT8 129 aa10.74□□□□□ -0.69
DDB1-202ENST00000414411 ECHDC2Q86YB7 292 aa10.74□□□□□ -0.69
DDB1-202ENST00000414411 RDH13Q8NBN7 331 aa10.74□□□□□ -0.69
DDB1-202ENST00000414411 EIF3CQ99613 913 aaKnown RBP10.74□□□□□ -0.69
DDB1-202ENST00000414411 NXF3Q9H4D5 531 aaKnown RBP10.74□□□□□ -0.69
DDB1-202ENST00000414411 NHEJ1Q9H9Q4 299 aaPredicted RBP10.74□□□□□ -0.69
DDB1-202ENST00000414411 C1orf112Q9NSG2 853 aa10.74□□□□□ -0.69
DDB1-202ENST00000414411 GUCA1BQ9UMX6 200 aa10.74□□□□□ -0.69
DDB1-202ENST00000414411 HES2Q9Y543 173 aa10.74□□□□□ -0.69
DDB1-202ENST00000414411 NR2E3Q9Y5X4 410 aa10.74□□□□□ -0.69
DDB1-202ENST00000414411 ANK1P16157 1881 aa10.74□□□□□ -0.69
DDB1-202ENST00000414411 ABHD14A-ACY1A0A1B0GW23 586 aa10.74□□□□□ -0.69
DDB1-202ENST00000414411 C19orf67A6NJJ6 358 aa10.74□□□□□ -0.69
DDB1-202ENST00000414411 ZNF233A6NK53 670 aa10.74□□□□□ -0.69
DDB1-202ENST00000414411 GNA14O95837 355 aa10.74□□□□□ -0.69
DDB1-202ENST00000414411 EOMESO95936 686 aa10.74□□□□□ -0.69
DDB1-202ENST00000414411 ACRP10323 421 aa10.74□□□□□ -0.69
DDB1-202ENST00000414411 HARSP12081 509 aaKnown RBP10.74□□□□□ -0.69
DDB1-202ENST00000414411 SKIP12755 728 aa10.74□□□□□ -0.69
DDB1-202ENST00000414411 OSTNP61366 133 aa10.74□□□□□ -0.69
DDB1-202ENST00000414411 ENOX2Q16206 610 aaKnown RBP10.74□□□□□ -0.69
DDB1-202ENST00000414411 SLC10A6Q3KNW5 377 aa10.74□□□□□ -0.69
DDB1-202ENST00000414411 XKR4Q5GH76 650 aa10.74□□□□□ -0.69
DDB1-202ENST00000414411 CCDC122Q5T0U0 273 aa10.74□□□□□ -0.69
DDB1-202ENST00000414411 FRMD5Q7Z6J6 570 aa10.74□□□□□ -0.69
DDB1-202ENST00000414411 EHBP1Q8NDI1 1231 aa10.74□□□□□ -0.69
DDB1-202ENST00000414411 PLEKHO2Q8TD55 490 aa10.74□□□□□ -0.69
DDB1-202ENST00000414411 TRIM6Q9C030 488 aaPredicted RBP10.74□□□□□ -0.69
DDB1-202ENST00000414411 SNTG2Q9NY99 539 aa10.74□□□□□ -0.69
DDB1-202ENST00000414411 PUF60Q9UHX1 559 aaKnown RBP10.74□□□□□ -0.69
DDB1-202ENST00000414411 PLAGL2Q9UPG8 496 aa10.74□□□□□ -0.69
DDB1-202ENST00000414411 FRMD4BQ9Y2L6 1034 aa10.74□□□□□ -0.69
DDB1-202ENST00000414411 MEIS3P2A8K0S8 358 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 419.3 ms