RNA–Protein interactions for RNA: ENST00000413601.3

LIMS4-201, Transcript of LIM zinc finger domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene LIMS4, Length 1,215 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS4-201ENST00000413601 FGFR3P22607 806 aa16.13■□□□□ 0.17
LIMS4-201ENST00000413601 RPL9P32969 192 aaKnown RBP16.13■□□□□ 0.17
LIMS4-201ENST00000413601 ACOT2P49753 483 aa16.13■□□□□ 0.17
LIMS4-201ENST00000413601 ASIC1P78348 528 aa16.13■□□□□ 0.17
LIMS4-201ENST00000413601 PSMD5Q16401 504 aa16.13■□□□□ 0.17
LIMS4-201ENST00000413601 ADALQ6DHV7 355 aa16.13■□□□□ 0.17
LIMS4-201ENST00000413601 SLFN12LQ6IEE8 588 aa16.13■□□□□ 0.17
LIMS4-201ENST00000413601 TMC5Q6UXY8 1006 aa16.13■□□□□ 0.17
LIMS4-201ENST00000413601 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.13■□□□□ 0.17
LIMS4-201ENST00000413601 LNX1Q8TBB1 728 aaPredicted RBP16.13■□□□□ 0.17
LIMS4-201ENST00000413601 PIK3R5Q8WYR1 880 aa16.13■□□□□ 0.17
LIMS4-201ENST00000413601 HPS3Q969F9 1004 aa16.13■□□□□ 0.17
LIMS4-201ENST00000413601 FAM212AQ96EL1 285 aa16.13■□□□□ 0.17
LIMS4-201ENST00000413601 KIF12Q96FN5 646 aa16.13■□□□□ 0.17
LIMS4-201ENST00000413601 RPGRIP1Q96KN7 1286 aa16.13■□□□□ 0.17
LIMS4-201ENST00000413601 EPHX3Q9H6B9 360 aa16.13■□□□□ 0.17
LIMS4-201ENST00000413601 SFXN1Q9H9B4 322 aa16.13■□□□□ 0.17
LIMS4-201ENST00000413601 CPSF3Q9UKF6 684 aaKnown RBP16.13■□□□□ 0.17
LIMS4-201ENST00000413601 AGO2Q9UKV8 859 aaKnown RBP16.13■□□□□ 0.17
LIMS4-201ENST00000413601 KCNH3Q9ULD8 1083 aa16.13■□□□□ 0.17
LIMS4-201ENST00000413601 EXOC7Q9UPT5 735 aa16.13■□□□□ 0.17
LIMS4-201ENST00000413601 PCDHB13Q9Y5F0 798 aa16.13■□□□□ 0.17
LIMS4-201ENST00000413601 STYXL1Q9Y6J8 313 aa16.13■□□□□ 0.17
LIMS4-201ENST00000413601 DOCK6Q96HP0 2047 aa16.12■□□□□ 0.17
LIMS4-201ENST00000413601 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.12■□□□□ 0.17
LIMS4-201ENST00000413601 TRAPPC3O43617 180 aa16.12■□□□□ 0.17
LIMS4-201ENST00000413601 PRPF6O94906 941 aaKnown RBP16.12■□□□□ 0.17
LIMS4-201ENST00000413601 TKTP29401 623 aaKnown RBP16.12■□□□□ 0.17
LIMS4-201ENST00000413601 CASP1P29466 404 aa16.12■□□□□ 0.17
LIMS4-201ENST00000413601 ADSSP30520 456 aa16.12■□□□□ 0.17
LIMS4-201ENST00000413601 CREMQ03060 361 aa16.12■□□□□ 0.17
LIMS4-201ENST00000413601 ALCAMQ13740 583 aa16.12■□□□□ 0.17
LIMS4-201ENST00000413601 ZBTB6Q15916 424 aa16.12■□□□□ 0.17
LIMS4-201ENST00000413601 SYCP3Q8IZU3 236 aa16.12■□□□□ 0.17
LIMS4-201ENST00000413601 GLIS3Q8NEA6 775 aa16.12■□□□□ 0.17
LIMS4-201ENST00000413601 POMGNT1Q8WZA1 660 aa16.12■□□□□ 0.17
LIMS4-201ENST00000413601 C7orf25Q9BPX7 421 aa16.12■□□□□ 0.17
LIMS4-201ENST00000413601 CLSTN3Q9BQT9 956 aa16.12■□□□□ 0.17
LIMS4-201ENST00000413601 POMKQ9H5K3 350 aa16.12■□□□□ 0.17
LIMS4-201ENST00000413601 ATP6V1DQ9Y5K8 247 aa16.12■□□□□ 0.17
LIMS4-201ENST00000413601 SCN1AP35498 2009 aa16.12■□□□□ 0.17
LIMS4-201ENST00000413601 MYO10Q9HD67 2058 aa16.12■□□□□ 0.17
LIMS4-201ENST00000413601 A0A1B0GVL5 298 aa16.11■□□□□ 0.17
LIMS4-201ENST00000413601 LOC730098B7Z3J9 87 aa16.11■□□□□ 0.17
LIMS4-201ENST00000413601 ADAM12O43184 909 aa16.11■□□□□ 0.17
LIMS4-201ENST00000413601 TGM5O43548 720 aa16.11■□□□□ 0.17
LIMS4-201ENST00000413601 ADRB2P07550 413 aa16.11■□□□□ 0.17
LIMS4-201ENST00000413601 SP100P23497 879 aaPredicted RBP16.11■□□□□ 0.17
LIMS4-201ENST00000413601 MTHFRP42898 656 aa16.11■□□□□ 0.17
LIMS4-201ENST00000413601 AFMP43652 599 aa16.11■□□□□ 0.17
LIMS4-201ENST00000413601 GUCY2FP51841 1108 aa16.11■□□□□ 0.17
LIMS4-201ENST00000413601 POSTNQ15063 836 aa16.11■□□□□ 0.17
LIMS4-201ENST00000413601 ATAT1Q5SQI0 421 aa16.11■□□□□ 0.17
LIMS4-201ENST00000413601 JADE1Q6IE81 842 aa16.11■□□□□ 0.17
LIMS4-201ENST00000413601 CNNM4Q6P4Q7 775 aa16.11■□□□□ 0.17
LIMS4-201ENST00000413601 LILRA6Q6PI73 481 aa16.11■□□□□ 0.17
LIMS4-201ENST00000413601 RIPOR3Q96MK2 946 aa16.11■□□□□ 0.17
LIMS4-201ENST00000413601 BLZF1Q9H2G9 400 aa16.11■□□□□ 0.17
LIMS4-201ENST00000413601 MAGEF1Q9HAY2 307 aa16.11■□□□□ 0.17
LIMS4-201ENST00000413601 SERTAD1Q9UHV2 236 aa16.11■□□□□ 0.17
LIMS4-201ENST00000413601 UBQLN1Q9UMX0 589 aaKnown RBP16.11■□□□□ 0.17
LIMS4-201ENST00000413601 NUB1Q9Y5A7 615 aa16.11■□□□□ 0.17
LIMS4-201ENST00000413601 CCDC195A0A1B0GUA6 201 aa16.1■□□□□ 0.17
LIMS4-201ENST00000413601 PI4K2BG5E9Z4 385 aa16.1■□□□□ 0.17
LIMS4-201ENST00000413601 RFPL2O75678 378 aa16.1■□□□□ 0.17
LIMS4-201ENST00000413601 PFKFB1P16118 471 aa16.1■□□□□ 0.17
LIMS4-201ENST00000413601 CMA1P23946 247 aa16.1■□□□□ 0.17
LIMS4-201ENST00000413601 MCM4P33991 863 aa16.1■□□□□ 0.17
LIMS4-201ENST00000413601 PDXDC1Q6P996 788 aa16.1■□□□□ 0.17
LIMS4-201ENST00000413601 ELMSAN1Q6PJG2 1045 aa16.1■□□□□ 0.17
LIMS4-201ENST00000413601 CRELD2Q6UXH1 353 aaPredicted RBP16.1■□□□□ 0.17
LIMS4-201ENST00000413601 GPR149Q86SP6 731 aa16.1■□□□□ 0.17
LIMS4-201ENST00000413601 RNF135Q8IUD6 432 aa16.1■□□□□ 0.17
LIMS4-201ENST00000413601 GRAMD1CQ8IYS0 662 aa16.1■□□□□ 0.17
LIMS4-201ENST00000413601 CEP57L1Q8IYX8 460 aa16.1■□□□□ 0.17
LIMS4-201ENST00000413601 ZSWIM2Q8NEG5 633 aa16.1■□□□□ 0.17
LIMS4-201ENST00000413601 NECTIN4Q96NY8 510 aa16.1■□□□□ 0.17
LIMS4-201ENST00000413601 PYM1Q9BRP8 204 aaKnown RBP16.1■□□□□ 0.17
LIMS4-201ENST00000413601 TSHZ2Q9NRE2 1034 aa16.1■□□□□ 0.17
LIMS4-201ENST00000413601 DPP7Q9UHL4 492 aa16.1■□□□□ 0.17
LIMS4-201ENST00000413601 XPOTO43592 962 aaKnown RBP16.09■□□□□ 0.17
LIMS4-201ENST00000413601 ACTN4O43707 911 aaKnown RBP16.09■□□□□ 0.17
LIMS4-201ENST00000413601 C1RP00736 705 aa16.09■□□□□ 0.17
LIMS4-201ENST00000413601 NFICP08651 508 aa16.09■□□□□ 0.17
LIMS4-201ENST00000413601 CYP3A5P20815 502 aa16.09■□□□□ 0.17
LIMS4-201ENST00000413601 LRPAP1P30533 357 aa16.09■□□□□ 0.17
LIMS4-201ENST00000413601 OR1D2P34982 312 aa16.09■□□□□ 0.17
LIMS4-201ENST00000413601 CUL4BQ13620 913 aa16.09■□□□□ 0.17
LIMS4-201ENST00000413601 RSPO2Q6UXX9 243 aaPredicted RBP16.09■□□□□ 0.17
LIMS4-201ENST00000413601 ANKS3Q6ZW76 656 aa16.09■□□□□ 0.17
LIMS4-201ENST00000413601 STXBP4Q6ZWJ1 553 aa16.09■□□□□ 0.17
LIMS4-201ENST00000413601 CD302Q8IX05 232 aa16.09■□□□□ 0.17
LIMS4-201ENST00000413601 KREMEN2Q8NCW0 462 aa16.09■□□□□ 0.17
LIMS4-201ENST00000413601 HDAC7Q8WUI4 952 aa16.09■□□□□ 0.17
LIMS4-201ENST00000413601 SAAL1Q96ER3 474 aa16.09■□□□□ 0.17
LIMS4-201ENST00000413601 SUSD3Q96L08 255 aa16.09■□□□□ 0.17
LIMS4-201ENST00000413601 TSPAN18Q96SJ8 248 aa16.09■□□□□ 0.17
LIMS4-201ENST00000413601 FAM213AQ9BRX8 229 aa16.09■□□□□ 0.17
LIMS4-201ENST00000413601 SCAND2PQ9GZW5 306 aaPredicted RBP16.09■□□□□ 0.17
LIMS4-201ENST00000413601 PLEKHA4Q9H4M7 779 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms