RNA–Protein interactions for RNA: ENST00000413141.5

VPS41-204, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-204ENST00000413141 PQBP1O60828 265 aaKnown RBP7.16□□□□□ -1.26
VPS41-204ENST00000413141 PHACTR2O75167 634 aa7.16□□□□□ -1.26
VPS41-204ENST00000413141 GFPT2O94808 682 aa7.16□□□□□ -1.26
VPS41-204ENST00000413141 NDUFA10O95299 355 aa7.16□□□□□ -1.26
VPS41-204ENST00000413141 ASS1P00966 412 aaKnown RBP7.16□□□□□ -1.26
VPS41-204ENST00000413141 SERPING1P05155 500 aa7.16□□□□□ -1.26
VPS41-204ENST00000413141 COL6A1P12109 1028 aa7.16□□□□□ -1.26
VPS41-204ENST00000413141 SELPP16109 830 aa7.16□□□□□ -1.26
VPS41-204ENST00000413141 FERP16591 822 aa7.16□□□□□ -1.26
VPS41-204ENST00000413141 AKAP5P24588 427 aa7.16□□□□□ -1.26
VPS41-204ENST00000413141 PRKCIP41743 596 aa7.16□□□□□ -1.26
VPS41-204ENST00000413141 STAT1P42224 750 aa7.16□□□□□ -1.26
VPS41-204ENST00000413141 GJA8P48165 433 aa7.16□□□□□ -1.26
VPS41-204ENST00000413141 RAB27AP51159 221 aa7.16□□□□□ -1.26
VPS41-204ENST00000413141 KIF11P52732 1056 aa7.16□□□□□ -1.26
VPS41-204ENST00000413141 MFAP3P55082 362 aa7.16□□□□□ -1.26
VPS41-204ENST00000413141 NOP14P78316 857 aaKnown RBP7.16□□□□□ -1.26
VPS41-204ENST00000413141 NFX1Q12986 1120 aaKnown RBP7.16□□□□□ -1.26
VPS41-204ENST00000413141 DSC3Q14574 896 aa7.16□□□□□ -1.26
VPS41-204ENST00000413141 ARHGAP44Q17R89 818 aa7.16□□□□□ -1.26
VPS41-204ENST00000413141 XKR4Q5GH76 650 aa7.16□□□□□ -1.26
VPS41-204ENST00000413141 WDR44Q5JSH3 913 aa7.16□□□□□ -1.26
VPS41-204ENST00000413141 SCARA3Q6AZY7 606 aa7.16□□□□□ -1.26
VPS41-204ENST00000413141 SPOPLQ6IQ16 392 aa7.16□□□□□ -1.26
VPS41-204ENST00000413141 LRRC8DQ7L1W4 858 aa7.16□□□□□ -1.26
VPS41-204ENST00000413141 ENOSF1Q7L5Y1 443 aa7.16□□□□□ -1.26
VPS41-204ENST00000413141 ANKRD33Q7Z3H0 272 aa7.16□□□□□ -1.26
VPS41-204ENST00000413141 FMNL3Q8IVF7 1028 aa7.16□□□□□ -1.26
VPS41-204ENST00000413141 CCDC170Q8IYT3 715 aa7.16□□□□□ -1.26
VPS41-204ENST00000413141 C1orf127Q8N9H9 656 aa7.16□□□□□ -1.26
VPS41-204ENST00000413141 ANKLE1Q8NAG6 615 aa7.16□□□□□ -1.26
VPS41-204ENST00000413141 USP38Q8NB14 1042 aa7.16□□□□□ -1.26
VPS41-204ENST00000413141 ACRBPQ8NEB7 543 aa7.16□□□□□ -1.26
VPS41-204ENST00000413141 CXorf38Q8TB03 319 aa7.16□□□□□ -1.26
VPS41-204ENST00000413141 DIS3LQ8TF46 1054 aaKnown RBP7.16□□□□□ -1.26
VPS41-204ENST00000413141 SHC3Q92529 594 aa7.16□□□□□ -1.26
VPS41-204ENST00000413141 ELMO3Q96BJ8 720 aa7.16□□□□□ -1.26
VPS41-204ENST00000413141 KIF12Q96FN5 646 aa7.16□□□□□ -1.26
VPS41-204ENST00000413141 PPP1R13BQ96KQ4 1090 aa7.16□□□□□ -1.26
VPS41-204ENST00000413141 FAM81BQ96LP2 452 aa7.16□□□□□ -1.26
VPS41-204ENST00000413141 KREMEN1Q96MU8 473 aa7.16□□□□□ -1.26
VPS41-204ENST00000413141 ARID3AQ99856 593 aa7.16□□□□□ -1.26
VPS41-204ENST00000413141 APOL6Q9BWW8 343 aa7.16□□□□□ -1.26
VPS41-204ENST00000413141 IMPG2Q9BZV3 1241 aa7.16□□□□□ -1.26
VPS41-204ENST00000413141 XYLT2Q9H1B5 865 aa7.16□□□□□ -1.26
VPS41-204ENST00000413141 CXCL16Q9H2A7 254 aa7.16□□□□□ -1.26
VPS41-204ENST00000413141 APOBEC3GQ9HC16 384 aaKnown RBP7.16□□□□□ -1.26
VPS41-204ENST00000413141 FAM105AQ9NUU6 356 aa7.16□□□□□ -1.26
VPS41-204ENST00000413141 SPTLC3Q9NUV7 552 aa7.16□□□□□ -1.26
VPS41-204ENST00000413141 SIX4Q9UIU6 781 aa7.16□□□□□ -1.26
VPS41-204ENST00000413141 ITGA11Q9UKX5 1188 aa7.16□□□□□ -1.26
VPS41-204ENST00000413141 PADI3Q9ULW8 664 aa7.16□□□□□ -1.26
VPS41-204ENST00000413141 PPP2R2CQ9Y2T4 447 aa7.16□□□□□ -1.26
VPS41-204ENST00000413141 PCDHB2Q9Y5E7 798 aa7.16□□□□□ -1.26
VPS41-204ENST00000413141 ADGRG1Q9Y653 693 aa7.16□□□□□ -1.26
VPS41-204ENST00000413141 UMODL1Q5DID0 1318 aa7.16□□□□□ -1.26
VPS41-204ENST00000413141 EIF3CLB5ME19 914 aaKnown RBP7.15□□□□□ -1.26
VPS41-204ENST00000413141 FOXN3O00409 490 aaPredicted RBP7.15□□□□□ -1.26
VPS41-204ENST00000413141 TLR3O15455 904 aaKnown RBP7.15□□□□□ -1.26
VPS41-204ENST00000413141 CCP110O43303 1012 aa7.15□□□□□ -1.26
VPS41-204ENST00000413141 ZSCAN12O43309 604 aa7.15□□□□□ -1.26
VPS41-204ENST00000413141 MGEA5O60502 916 aa7.15□□□□□ -1.26
VPS41-204ENST00000413141 CLSTN1O94985 981 aa7.15□□□□□ -1.26
VPS41-204ENST00000413141 LCA5LO95447 670 aa7.15□□□□□ -1.26
VPS41-204ENST00000413141 CST3P01034 146 aaPredicted RBP7.15□□□□□ -1.26
VPS41-204ENST00000413141 TFRCP02786 760 aaKnown RBP7.15□□□□□ -1.26
VPS41-204ENST00000413141 ITGB3P05106 788 aa7.15□□□□□ -1.26
VPS41-204ENST00000413141 CCDC175P0C221 793 aa7.15□□□□□ -1.26
VPS41-204ENST00000413141 KCNE1P15382 129 aa7.15□□□□□ -1.26
VPS41-204ENST00000413141 ZSCAN20P17040 1043 aaPredicted RBP7.15□□□□□ -1.26
VPS41-204ENST00000413141 TBXAS1P24557 533 aaPredicted RBP7.15□□□□□ -1.26
VPS41-204ENST00000413141 ANXA13P27216 316 aa7.15□□□□□ -1.26
VPS41-204ENST00000413141 POLR2BP30876 1174 aaKnown RBP7.15□□□□□ -1.26
VPS41-204ENST00000413141 CYLC1P35663 651 aaPredicted RBP7.15□□□□□ -1.26
VPS41-204ENST00000413141 EIF4A3P38919 411 aaKnown RBP7.15□□□□□ -1.26
VPS41-204ENST00000413141 ASPAP45381 313 aa7.15□□□□□ -1.26
VPS41-204ENST00000413141 GUCY2FP51841 1108 aa7.15□□□□□ -1.26
VPS41-204ENST00000413141 ATN1P54259 1190 aaPredicted RBP7.15□□□□□ -1.26
VPS41-204ENST00000413141 MYL6P60660 151 aa7.15□□□□□ -1.26
VPS41-204ENST00000413141 ARID5AQ03989 594 aa7.15□□□□□ -1.26
VPS41-204ENST00000413141 PTK2Q05397 1052 aa7.15□□□□□ -1.26
VPS41-204ENST00000413141 KLHL30Q0D2K2 578 aa7.15□□□□□ -1.26
VPS41-204ENST00000413141 TRPC3Q13507 836 aa7.15□□□□□ -1.26
VPS41-204ENST00000413141 BFSP2Q13515 415 aa7.15□□□□□ -1.26
VPS41-204ENST00000413141 CUL2Q13617 745 aa7.15□□□□□ -1.26
VPS41-204ENST00000413141 ASTE1Q2TB18 679 aaPredicted RBP7.15□□□□□ -1.26
VPS41-204ENST00000413141 ZNF699Q32M78 642 aa7.15□□□□□ -1.26
VPS41-204ENST00000413141 TRIM60Q495X7 471 aa7.15□□□□□ -1.26
VPS41-204ENST00000413141 GLRA4Q5JXX5 417 aa7.15□□□□□ -1.26
VPS41-204ENST00000413141 C1orf53Q5VUE5 145 aa7.15□□□□□ -1.26
VPS41-204ENST00000413141 ALKAL1Q6UXT8 129 aa7.15□□□□□ -1.26
VPS41-204ENST00000413141 SLC39A5Q6ZMH5 540 aa7.15□□□□□ -1.26
VPS41-204ENST00000413141 IRF2BP2Q7Z5L9 587 aa7.15□□□□□ -1.26
VPS41-204ENST00000413141 FAM71AQ8IYT1 594 aa7.15□□□□□ -1.26
VPS41-204ENST00000413141 HACE1Q8IYU2 909 aa7.15□□□□□ -1.26
VPS41-204ENST00000413141 TMEM130Q8N3G9 435 aa7.15□□□□□ -1.26
VPS41-204ENST00000413141 UBR7Q8N806 425 aa7.15□□□□□ -1.26
VPS41-204ENST00000413141 OLIG1Q8TAK6 271 aa7.15□□□□□ -1.26
VPS41-204ENST00000413141 TAF4BQ92750 862 aa7.15□□□□□ -1.26
VPS41-204ENST00000413141 TATDN2Q93075 761 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms