RNA–Protein interactions for RNA: ENST00000412913.1

SMARCAL1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 4

Gene SMARCAL1, Length 538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-204ENST00000412913 EXOC3L4Q17RC7 722 aa11.41□□□□□ -0.58
SMARCAL1-204ENST00000412913 FKBP15Q5T1M5 1219 aa11.41□□□□□ -0.58
SMARCAL1-204ENST00000412913 GBP6Q6ZN66 633 aa11.41□□□□□ -0.58
SMARCAL1-204ENST00000412913 TMC6Q7Z403 805 aa11.41□□□□□ -0.58
SMARCAL1-204ENST00000412913 HACE1Q8IYU2 909 aa11.41□□□□□ -0.58
SMARCAL1-204ENST00000412913 RNF169Q8NCN4 708 aa11.41□□□□□ -0.58
SMARCAL1-204ENST00000412913 FBXL13Q8NEE6 735 aa11.41□□□□□ -0.58
SMARCAL1-204ENST00000412913 C18orf25Q96B23 403 aaPredicted RBP11.41□□□□□ -0.58
SMARCAL1-204ENST00000412913 PGBD4Q96DM1 585 aa11.41□□□□□ -0.58
SMARCAL1-204ENST00000412913 KIF12Q96FN5 646 aa11.41□□□□□ -0.58
SMARCAL1-204ENST00000412913 ANKRD36BP1Q96IX9 119 aa11.41□□□□□ -0.58
SMARCAL1-204ENST00000412913 CRACR2AQ9BSW2 395 aa11.41□□□□□ -0.58
SMARCAL1-204ENST00000412913 LSM14BQ9BX40 385 aaKnown RBP11.41□□□□□ -0.58
SMARCAL1-204ENST00000412913 INTS2Q9H0H0 1204 aaKnown RBP11.41□□□□□ -0.58
SMARCAL1-204ENST00000412913 ZMYND8Q9ULU4 1186 aaPredicted RBP11.41□□□□□ -0.58
SMARCAL1-204ENST00000412913 ABHD14A-ACY1A0A1B0GW23 586 aa11.4□□□□□ -0.58
SMARCAL1-204ENST00000412913 ANO9A1A5B4 782 aa11.4□□□□□ -0.58
SMARCAL1-204ENST00000412913 BAIAP3O94812 1187 aa11.4□□□□□ -0.58
SMARCAL1-204ENST00000412913 ITGB3P05106 788 aa11.4□□□□□ -0.58
SMARCAL1-204ENST00000412913 TPM3P06753 285 aa11.4□□□□□ -0.58
SMARCAL1-204ENST00000412913 PIK3CAP42336 1068 aa11.4□□□□□ -0.58
SMARCAL1-204ENST00000412913 GRIK3Q13003 919 aa11.4□□□□□ -0.58
SMARCAL1-204ENST00000412913 IKBKEQ14164 716 aa11.4□□□□□ -0.58
SMARCAL1-204ENST00000412913 DUOXA2Q1HG44 320 aa11.4□□□□□ -0.58
SMARCAL1-204ENST00000412913 FIGNQ5HY92 759 aa11.4□□□□□ -0.58
SMARCAL1-204ENST00000412913 SPECC1LQ69YQ0 1117 aa11.4□□□□□ -0.58
SMARCAL1-204ENST00000412913 NPAS4Q8IUM7 802 aa11.4□□□□□ -0.58
SMARCAL1-204ENST00000412913 ARHGEF19Q8IW93 802 aa11.4□□□□□ -0.58
SMARCAL1-204ENST00000412913 HELQQ8TDG4 1101 aa11.4□□□□□ -0.58
SMARCAL1-204ENST00000412913 ELMO3Q96BJ8 720 aa11.4□□□□□ -0.58
SMARCAL1-204ENST00000412913 RPS6KC1Q96S38 1066 aa11.4□□□□□ -0.58
SMARCAL1-204ENST00000412913 TSPAN18Q96SJ8 248 aa11.4□□□□□ -0.58
SMARCAL1-204ENST00000412913 XYLT2Q9H1B5 865 aa11.4□□□□□ -0.58
SMARCAL1-204ENST00000412913 GOLGA2P5Q9HBQ8 144 aa11.4□□□□□ -0.58
SMARCAL1-204ENST00000412913 PLCB1Q9NQ66 1216 aa11.4□□□□□ -0.58
SMARCAL1-204ENST00000412913 RAB20Q9NX57 234 aa11.4□□□□□ -0.58
SMARCAL1-204ENST00000412913 PRKAG2Q9UGJ0 569 aa11.4□□□□□ -0.58
SMARCAL1-204ENST00000412913 ITGA11Q9UKX5 1188 aa11.4□□□□□ -0.58
SMARCAL1-204ENST00000412913 UBQLN1Q9UMX0 589 aaKnown RBP11.4□□□□□ -0.58
SMARCAL1-204ENST00000412913 VWA8A3KMH1 1905 aa11.4□□□□□ -0.58
SMARCAL1-204ENST00000412913 RNF225M0QZC1 329 aaPredicted RBP11.39□□□□□ -0.59
SMARCAL1-204ENST00000412913 CST3P01034 146 aaPredicted RBP11.39□□□□□ -0.59
SMARCAL1-204ENST00000412913 TNNC2P02585 160 aa11.39□□□□□ -0.59
SMARCAL1-204ENST00000412913 CYP3A5P20815 502 aa11.39□□□□□ -0.59
SMARCAL1-204ENST00000412913 IBSPP21815 317 aaPredicted RBP11.39□□□□□ -0.59
SMARCAL1-204ENST00000412913 LRPAP1P30533 357 aa11.39□□□□□ -0.59
SMARCAL1-204ENST00000412913 POLR2BP30876 1174 aaKnown RBP11.39□□□□□ -0.59
SMARCAL1-204ENST00000412913 MYL6P60660 151 aa11.39□□□□□ -0.59
SMARCAL1-204ENST00000412913 DSC1Q08554 894 aa11.39□□□□□ -0.59
SMARCAL1-204ENST00000412913 BIRC3Q13489 604 aa11.39□□□□□ -0.59
SMARCAL1-204ENST00000412913 NCOA4Q13772 614 aa11.39□□□□□ -0.59
SMARCAL1-204ENST00000412913 TMEM240Q5SV17 173 aa11.39□□□□□ -0.59
SMARCAL1-204ENST00000412913 PHLDB3Q6NSJ2 640 aa11.39□□□□□ -0.59
SMARCAL1-204ENST00000412913 RPUSD2Q8IZ73 545 aaKnown RBP11.39□□□□□ -0.59
SMARCAL1-204ENST00000412913 EHBP1Q8NDI1 1231 aa11.39□□□□□ -0.59
SMARCAL1-204ENST00000412913 BAP1Q92560 729 aa11.39□□□□□ -0.59
SMARCAL1-204ENST00000412913 CASD1Q96PB1 797 aa11.39□□□□□ -0.59
SMARCAL1-204ENST00000412913 PPP1R9BQ96SB3 815 aa11.39□□□□□ -0.59
SMARCAL1-204ENST00000412913 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.39□□□□□ -0.595e-6■■■□□ 16.3
SMARCAL1-204ENST00000412913 PI4K2AQ9BTU6 479 aa11.39□□□□□ -0.59
SMARCAL1-204ENST00000412913 NAA15Q9BXJ9 866 aaKnown RBP11.39□□□□□ -0.59
SMARCAL1-204ENST00000412913 APOBEC3GQ9HC16 384 aaKnown RBP11.39□□□□□ -0.59
SMARCAL1-204ENST00000412913 UBN1Q9NPG3 1134 aa11.39□□□□□ -0.59
SMARCAL1-204ENST00000412913 FAM207AQ9NSI2 230 aaPredicted RBP11.39□□□□□ -0.59
SMARCAL1-204ENST00000412913 HCSTQ9UBK5 93 aa11.39□□□□□ -0.59
SMARCAL1-204ENST00000412913 CACNG4Q9UBN1 327 aa11.39□□□□□ -0.59
SMARCAL1-204ENST00000412913 FHOD1Q9Y613 1164 aa11.39□□□□□ -0.59
SMARCAL1-204ENST00000412913 PIRO00625 290 aa11.38□□□□□ -0.59
SMARCAL1-204ENST00000412913 EFCAB14O75071 495 aa11.38□□□□□ -0.59
SMARCAL1-204ENST00000412913 ZC3H11AO75152 810 aaKnown RBP eCLIP11.38□□□□□ -0.59
SMARCAL1-204ENST00000412913 STAU1O95793 577 aaKnown RBP11.38□□□□□ -0.59
SMARCAL1-204ENST00000412913 ASS1P00966 412 aaKnown RBP11.38□□□□□ -0.59
SMARCAL1-204ENST00000412913 POMCP01189 267 aa11.38□□□□□ -0.59
SMARCAL1-204ENST00000412913 THP07101 528 aa11.38□□□□□ -0.59
SMARCAL1-204ENST00000412913 IGFBP6P24592 240 aaPredicted RBP11.38□□□□□ -0.59
SMARCAL1-204ENST00000412913 FXR1P51114 621 aaKnown RBP eCLIP11.38□□□□□ -0.59
SMARCAL1-204ENST00000412913 NOP14P78316 857 aaKnown RBP11.38□□□□□ -0.59
SMARCAL1-204ENST00000412913 ARID5BQ14865 1188 aa11.38□□□□□ -0.59
SMARCAL1-204ENST00000412913 KLHDC7AQ5VTJ3 777 aa11.38□□□□□ -0.59
SMARCAL1-204ENST00000412913 C9orf57Q5W0N0 161 aa11.38□□□□□ -0.59
SMARCAL1-204ENST00000412913 E4F1Q66K89 784 aaPredicted RBP11.38□□□□□ -0.59
SMARCAL1-204ENST00000412913 SPOPLQ6IQ16 392 aa11.38□□□□□ -0.59
SMARCAL1-204ENST00000412913 GJB7Q6PEY0 223 aa11.38□□□□□ -0.59
SMARCAL1-204ENST00000412913 PSRC1Q6PGN9 363 aaPredicted RBP11.38□□□□□ -0.59
SMARCAL1-204ENST00000412913 ZNF365Q70YC5 407 aa11.38□□□□□ -0.59
SMARCAL1-204ENST00000412913 OTOP2Q7RTS6 562 aa11.38□□□□□ -0.59
SMARCAL1-204ENST00000412913 TMCO2Q7Z6W1 182 aaPredicted RBP11.38□□□□□ -0.59
SMARCAL1-204ENST00000412913 UBR7Q8N806 425 aa11.38□□□□□ -0.59
SMARCAL1-204ENST00000412913 SPC24Q8NBT2 197 aa11.38□□□□□ -0.59
SMARCAL1-204ENST00000412913 BEST2Q8NFU1 509 aa11.38□□□□□ -0.59
SMARCAL1-204ENST00000412913 CACTINQ8WUQ7 758 aaKnown RBP11.38□□□□□ -0.59
SMARCAL1-204ENST00000412913 KAT5Q92993 513 aa11.38□□□□□ -0.59
SMARCAL1-204ENST00000412913 TOP1MTQ969P6 601 aa11.38□□□□□ -0.59
SMARCAL1-204ENST00000412913 ZNF689Q96CS4 500 aaPredicted RBP11.38□□□□□ -0.59
SMARCAL1-204ENST00000412913 PAAF1Q9BRP4 392 aa11.38□□□□□ -0.59
SMARCAL1-204ENST00000412913 GPR88Q9GZN0 384 aa11.38□□□□□ -0.59
SMARCAL1-204ENST00000412913 VRTNQ9H8Y1 702 aa11.38□□□□□ -0.59
SMARCAL1-204ENST00000412913 TBC1D13Q9NVG8 400 aa11.38□□□□□ -0.59
SMARCAL1-204ENST00000412913 DPP3Q9NY33 737 aa11.38□□□□□ -0.59
SMARCAL1-204ENST00000412913 APEX2Q9UBZ4 518 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms