RNA–Protein interactions for RNA: ENST00000412714.1

LINC00388-201, long intergenic non-protein coding RNA 388, humanhuman

TSL 5 BASIC

Gene LINC00388, Length 663 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00388-201ENST00000412714 PTPRZ1P23471 2315 aaPredicted RBP13.87□□□□□ -0.19
LINC00388-201ENST00000412714 HNRNPA1P09651 372 aaKnown RBP eCLIP13.86□□□□□ -0.19
LINC00388-201ENST00000412714 LAMP2P13473 410 aa13.86□□□□□ -0.19
LINC00388-201ENST00000412714 FSHRP23945 695 aa13.86□□□□□ -0.19
LINC00388-201ENST00000412714 LONP1P36776 959 aaKnown RBP13.86□□□□□ -0.19
LINC00388-201ENST00000412714 NBL1P41271 181 aa13.86□□□□□ -0.19
LINC00388-201ENST00000412714 ZNF165P49910 485 aa13.86□□□□□ -0.19
LINC00388-201ENST00000412714 HS1BP3Q53T59 392 aa13.86□□□□□ -0.19
LINC00388-201ENST00000412714 PPM1LQ5SGD2 360 aa13.86□□□□□ -0.19
LINC00388-201ENST00000412714 ATF7IP2Q5U623 682 aa13.86□□□□□ -0.19
LINC00388-201ENST00000412714 EEF1DP3Q658K8 133 aa13.86□□□□□ -0.19
LINC00388-201ENST00000412714 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.86□□□□□ -0.19
LINC00388-201ENST00000412714 C11orf57Q6ZUT1 292 aaPredicted RBP13.86□□□□□ -0.19
LINC00388-201ENST00000412714 CCDC105Q8IYK2 499 aa13.86□□□□□ -0.19
LINC00388-201ENST00000412714 SLC44A3Q8N4M1 653 aa13.86□□□□□ -0.19
LINC00388-201ENST00000412714 LNX1Q8TBB1 728 aaPredicted RBP13.86□□□□□ -0.19
LINC00388-201ENST00000412714 SNX29Q8TEQ0 813 aa13.86□□□□□ -0.19
LINC00388-201ENST00000412714 BPIFA3Q9BQP9 254 aa13.86□□□□□ -0.19
LINC00388-201ENST00000412714 CLSTN3Q9BQT9 956 aa13.86□□□□□ -0.19
LINC00388-201ENST00000412714 DNAJC25Q9H1X3 360 aa13.86□□□□□ -0.19
LINC00388-201ENST00000412714 CA14Q9ULX7 337 aa13.86□□□□□ -0.19
LINC00388-201ENST00000412714 KIAA1024Q9UPX6 916 aa13.86□□□□□ -0.19
LINC00388-201ENST00000412714 ZFP37Q9Y6Q3 630 aaPredicted RBP13.86□□□□□ -0.19
LINC00388-201ENST00000412714 DMDP11532 3685 aa13.86□□□□□ -0.19
LINC00388-201ENST00000412714 K7ERI5 159 aa13.85□□□□□ -0.19
LINC00388-201ENST00000412714 PI15O43692 258 aa13.85□□□□□ -0.19
LINC00388-201ENST00000412714 XYLBO75191 536 aa13.85□□□□□ -0.19
LINC00388-201ENST00000412714 EDN1P05305 212 aa13.85□□□□□ -0.19
LINC00388-201ENST00000412714 C8AP07357 584 aa13.85□□□□□ -0.19
LINC00388-201ENST00000412714 HOXA9P31269 272 aa13.85□□□□□ -0.19
LINC00388-201ENST00000412714 NAB2Q15742 525 aa13.85□□□□□ -0.19
LINC00388-201ENST00000412714 ECM1Q16610 540 aa13.85□□□□□ -0.19
LINC00388-201ENST00000412714 GLRA4Q5JXX5 417 aa13.85□□□□□ -0.19
LINC00388-201ENST00000412714 ASCL5Q7RTU5 278 aa13.85□□□□□ -0.19
LINC00388-201ENST00000412714 GRASPQ7Z6J2 395 aaPredicted RBP13.85□□□□□ -0.19
LINC00388-201ENST00000412714 DTWD2Q8NBA8 298 aa13.85□□□□□ -0.19
LINC00388-201ENST00000412714 CCDC34Q96HJ3 373 aa13.85□□□□□ -0.19
LINC00388-201ENST00000412714 UROC1Q96N76 676 aa13.85□□□□□ -0.19
LINC00388-201ENST00000412714 NAT10Q9H0A0 1025 aaKnown RBP13.85□□□□□ -0.19
LINC00388-201ENST00000412714 POLD4Q9HCU8 107 aa13.85□□□□□ -0.19
LINC00388-201ENST00000412714 POLIQ9UNA4 740 aa13.85□□□□□ -0.19
LINC00388-201ENST00000412714 VWA8A3KMH1 1905 aa13.85□□□□□ -0.19
LINC00388-201ENST00000412714 RIF1Q5UIP0 2472 aaKnown RBP13.85□□□□□ -0.19
LINC00388-201ENST00000412714 TRIP11Q15643 1979 aa13.84□□□□□ -0.19
LINC00388-201ENST00000412714 CFAP54Q96N23 3096 aa13.84□□□□□ -0.19
LINC00388-201ENST00000412714 KRBA1A5PL33 1030 aa13.84□□□□□ -0.19
LINC00388-201ENST00000412714 VWA3AA6NCI4 1184 aa13.84□□□□□ -0.19
LINC00388-201ENST00000412714 PRR23AA6NEV1 266 aa13.84□□□□□ -0.19
LINC00388-201ENST00000412714 CCDC169A6NNP5 214 aa13.84□□□□□ -0.19
LINC00388-201ENST00000412714 TMEM189-UBE2V1I3L0A0 370 aa13.84□□□□□ -0.19
LINC00388-201ENST00000412714 POLR2DO15514 142 aaKnown RBP13.84□□□□□ -0.19
LINC00388-201ENST00000412714 TRAPPC3O43617 180 aa13.84□□□□□ -0.19
LINC00388-201ENST00000412714 B3GAT3O94766 335 aa13.84□□□□□ -0.19
LINC00388-201ENST00000412714 YARSP54577 528 aaKnown RBP13.84□□□□□ -0.19
LINC00388-201ENST00000412714 NLRP12P59046 1061 aa13.84□□□□□ -0.19
LINC00388-201ENST00000412714 DMP1Q13316 513 aaPredicted RBP13.84□□□□□ -0.19
LINC00388-201ENST00000412714 HTR4Q13639 388 aa13.84□□□□□ -0.19
LINC00388-201ENST00000412714 PDIA5Q14554 519 aa13.84□□□□□ -0.19
LINC00388-201ENST00000412714 IQCB1Q15051 598 aa13.84□□□□□ -0.19
LINC00388-201ENST00000412714 POSTNQ15063 836 aa13.84□□□□□ -0.19
LINC00388-201ENST00000412714 ANGPT1Q15389 498 aa13.84□□□□□ -0.19
LINC00388-201ENST00000412714 ZRSR1Q15695 479 aaKnown RBP13.84□□□□□ -0.19
LINC00388-201ENST00000412714 SPECC1Q5M775 1068 aa13.84□□□□□ -0.19
LINC00388-201ENST00000412714 NT5DC1Q5TFE4 455 aa13.84□□□□□ -0.19
LINC00388-201ENST00000412714 FRMD5Q7Z6J6 570 aa13.84□□□□□ -0.19
LINC00388-201ENST00000412714 GPR152Q8TDT2 470 aa13.84□□□□□ -0.19
LINC00388-201ENST00000412714 NKD2Q969F2 451 aaPredicted RBP13.84□□□□□ -0.19
LINC00388-201ENST00000412714 CCDC94Q9BW85 323 aaPredicted RBP13.84□□□□□ -0.19
LINC00388-201ENST00000412714 CXCL16Q9H2A7 254 aa13.84□□□□□ -0.19
LINC00388-201ENST00000412714 TBC1D17Q9HA65 648 aa13.84□□□□□ -0.19
LINC00388-201ENST00000412714 ARHGEF3Q9NR81 526 aa13.84□□□□□ -0.19
LINC00388-201ENST00000412714 TOPORSQ9NS56 1045 aaPredicted RBP13.84□□□□□ -0.19
LINC00388-201ENST00000412714 CDH7Q9ULB5 785 aa13.84□□□□□ -0.19
LINC00388-201ENST00000412714 DNM3Q9UQ16 869 aa13.84□□□□□ -0.19
LINC00388-201ENST00000412714 TNFSF13BQ9Y275 285 aa13.84□□□□□ -0.19
LINC00388-201ENST00000412714 NUMBLQ9Y6R0 609 aa13.84□□□□□ -0.19
LINC00388-201ENST00000412714 FAM186AA6NE01 2351 aa13.84□□□□□ -0.19
LINC00388-201ENST00000412714 DOCK6Q96HP0 2047 aa13.84□□□□□ -0.19
LINC00388-201ENST00000412714 PHLPP2Q6ZVD8 1323 aa13.84□□□□□ -0.19
LINC00388-201ENST00000412714 ANHXE9PGG2 379 aa13.83□□□□□ -0.2
LINC00388-201ENST00000412714 CCL16O15467 120 aa13.83□□□□□ -0.2
LINC00388-201ENST00000412714 SLFN14P0C7P3 912 aa13.83□□□□□ -0.2
LINC00388-201ENST00000412714 OR1D2P34982 312 aa13.83□□□□□ -0.2
LINC00388-201ENST00000412714 TXLNAP40222 546 aa13.83□□□□□ -0.2
LINC00388-201ENST00000412714 CLCNKBP51801 687 aa13.83□□□□□ -0.2
LINC00388-201ENST00000412714 PEX3P56589 373 aa13.83□□□□□ -0.2
LINC00388-201ENST00000412714 RAB33AQ14088 237 aa13.83□□□□□ -0.2
LINC00388-201ENST00000412714 IL17AQ16552 155 aa13.83□□□□□ -0.2
LINC00388-201ENST00000412714 DPCR1Q3MIW9 517 aa13.83□□□□□ -0.2
LINC00388-201ENST00000412714 ZNF568Q3ZCX4 644 aa13.83□□□□□ -0.2
LINC00388-201ENST00000412714 KRT79Q5XKE5 535 aa13.83□□□□□ -0.2
LINC00388-201ENST00000412714 DCLRE1AQ6PJP8 1040 aa13.83□□□□□ -0.2
LINC00388-201ENST00000412714 USP49Q70CQ1 688 aa13.83□□□□□ -0.2
LINC00388-201ENST00000412714 LUZP1Q86V48 1076 aa13.83□□□□□ -0.2
LINC00388-201ENST00000412714 IGSF22Q8N9C0 903 aa13.83□□□□□ -0.2
LINC00388-201ENST00000412714 SLC7A14Q8TBB6 771 aa13.83□□□□□ -0.2
LINC00388-201ENST00000412714 AK8Q96MA6 479 aa13.83□□□□□ -0.2
LINC00388-201ENST00000412714 PPP1R10Q96QC0 940 aaKnown RBP13.83□□□□□ -0.2
LINC00388-201ENST00000412714 MTRRQ9UBK8 725 aa13.83□□□□□ -0.2
LINC00388-201ENST00000412714 VPS13AQ96RL7 3174 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms