RNA–Protein interactions for RNA: ENST00000412157.2

SNRNP35-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 35, humanhuman

TSL 1 (best) BASIC

Gene SNRNP35, Length 1,140 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP35-202ENST00000412157 TMEM132DQ14C87 1099 aa12.5□□□□□ -0.41
SNRNP35-202ENST00000412157 JADE1Q6IE81 842 aa12.5□□□□□ -0.41
SNRNP35-202ENST00000412157 IRF2BP2Q7Z5L9 587 aa12.5□□□□□ -0.41
SNRNP35-202ENST00000412157 HACE1Q8IYU2 909 aa12.5□□□□□ -0.41
SNRNP35-202ENST00000412157 HELQQ8TDG4 1101 aa12.5□□□□□ -0.41
SNRNP35-202ENST00000412157 DPF3Q92784 378 aa12.5□□□□□ -0.41
SNRNP35-202ENST00000412157 JAKMIP2Q96AA8 810 aa12.5□□□□□ -0.41
SNRNP35-202ENST00000412157 FAM84AQ96KN4 292 aa12.5□□□□□ -0.41
SNRNP35-202ENST00000412157 TSGA10Q9BZW7 698 aa12.5□□□□□ -0.41
SNRNP35-202ENST00000412157 GPR88Q9GZN0 384 aa12.5□□□□□ -0.41
SNRNP35-202ENST00000412157 SENP6Q9GZR1 1112 aaPredicted RBP12.5□□□□□ -0.41
SNRNP35-202ENST00000412157 PLEKHA5Q9HAU0 1116 aa12.5□□□□□ -0.41
SNRNP35-202ENST00000412157 LZTFL1Q9NQ48 299 aa12.5□□□□□ -0.41
SNRNP35-202ENST00000412157 PHF24Q9UPV7 400 aa12.5□□□□□ -0.41
SNRNP35-202ENST00000412157 NOC2LQ9Y3T9 749 aaKnown RBP12.5□□□□□ -0.41
SNRNP35-202ENST00000412157 TDRD15B5MCY1 1934 aaKnown RBP12.5□□□□□ -0.41
SNRNP35-202ENST00000412157 TANC1Q9C0D5 1861 aa12.49□□□□□ -0.41
SNRNP35-202ENST00000412157 DNM1LO00429 736 aa12.49□□□□□ -0.41
SNRNP35-202ENST00000412157 GPR182O15218 404 aa12.49□□□□□ -0.41
SNRNP35-202ENST00000412157 KRT86O43790 486 aa12.49□□□□□ -0.41
SNRNP35-202ENST00000412157 LCA5LO95447 670 aa12.49□□□□□ -0.41
SNRNP35-202ENST00000412157 NFICP08651 508 aa12.49□□□□□ -0.41
SNRNP35-202ENST00000412157 MAGEA1P43355 309 aa12.49□□□□□ -0.41
SNRNP35-202ENST00000412157 YWHAEP62258 255 aaKnown RBP12.49□□□□□ -0.41
SNRNP35-202ENST00000412157 PTK2Q05397 1052 aa12.49□□□□□ -0.41
SNRNP35-202ENST00000412157 SLC18A3Q16572 532 aa12.49□□□□□ -0.41
SNRNP35-202ENST00000412157 SGSM1Q2NKQ1 1148 aa12.49□□□□□ -0.41
SNRNP35-202ENST00000412157 ASTE1Q2TB18 679 aaPredicted RBP12.49□□□□□ -0.41
SNRNP35-202ENST00000412157 ZNF699Q32M78 642 aa12.49□□□□□ -0.41
SNRNP35-202ENST00000412157 SLC10A6Q3KNW5 377 aa12.49□□□□□ -0.41
SNRNP35-202ENST00000412157 C10orf76Q5T2E6 689 aa12.49□□□□□ -0.41
SNRNP35-202ENST00000412157 TWF2Q6IBS0 349 aaKnown RBP12.49□□□□□ -0.41
SNRNP35-202ENST00000412157 SHC3Q92529 594 aa12.49□□□□□ -0.41
SNRNP35-202ENST00000412157 TAF4BQ92750 862 aa12.49□□□□□ -0.41
SNRNP35-202ENST00000412157 KAT5Q92993 513 aa12.49□□□□□ -0.41
SNRNP35-202ENST00000412157 TATDN2Q93075 761 aa12.49□□□□□ -0.41
SNRNP35-202ENST00000412157 WNT8BQ93098 351 aa12.49□□□□□ -0.41
SNRNP35-202ENST00000412157 KIF12Q96FN5 646 aa12.49□□□□□ -0.41
SNRNP35-202ENST00000412157 SNX27Q96L92 541 aa12.49□□□□□ -0.41
SNRNP35-202ENST00000412157 KREMEN1Q96MU8 473 aa12.49□□□□□ -0.41
SNRNP35-202ENST00000412157 EIF2AQ9BY44 585 aaKnown RBP12.49□□□□□ -0.41
SNRNP35-202ENST00000412157 IFIH1Q9BYX4 1025 aaKnown RBP12.49□□□□□ -0.41
SNRNP35-202ENST00000412157 TRMT13Q9NUP7 481 aaKnown RBP12.49□□□□□ -0.41
SNRNP35-202ENST00000412157 SNTG2Q9NY99 539 aa12.49□□□□□ -0.41
SNRNP35-202ENST00000412157 DERAQ9Y315 318 aa12.49□□□□□ -0.41
SNRNP35-202ENST00000412157 REXO2Q9Y3B8 237 aaKnown RBP12.49□□□□□ -0.41
SNRNP35-202ENST00000412157 C2CD2Q9Y426 696 aa12.49□□□□□ -0.41
SNRNP35-202ENST00000412157 PCDHA13Q9Y5I0 950 aa12.49□□□□□ -0.41
SNRNP35-202ENST00000412157 MYH10P35580 1976 aa12.49□□□□□ -0.41
SNRNP35-202ENST00000412157 RBAK-RBAKDNI3L0D1 243 aa12.48□□□□□ -0.41
SNRNP35-202ENST00000412157 ARVCFO00192 962 aa12.48□□□□□ -0.41
SNRNP35-202ENST00000412157 FOXN3O00409 490 aaPredicted RBP12.48□□□□□ -0.41
SNRNP35-202ENST00000412157 XPOTO43592 962 aaKnown RBP12.48□□□□□ -0.41
SNRNP35-202ENST00000412157 KIF5CO60282 957 aa12.48□□□□□ -0.41
SNRNP35-202ENST00000412157 RECQL4O94761 1208 aa12.48□□□□□ -0.41
SNRNP35-202ENST00000412157 ASS1P00966 412 aaKnown RBP12.48□□□□□ -0.41
SNRNP35-202ENST00000412157 CHRNA1P02708 482 aa12.48□□□□□ -0.41
SNRNP35-202ENST00000412157 KRT19P08727 400 aa12.48□□□□□ -0.41
SNRNP35-202ENST00000412157 CCL5P13501 91 aa12.48□□□□□ -0.41
SNRNP35-202ENST00000412157 KRT5P13647 590 aa12.48□□□□□ -0.41
SNRNP35-202ENST00000412157 TNFAIP3P21580 790 aa12.48□□□□□ -0.41
SNRNP35-202ENST00000412157 PDE6CP51160 858 aa12.48□□□□□ -0.41
SNRNP35-202ENST00000412157 MYL6P60660 151 aa12.48□□□□□ -0.41
SNRNP35-202ENST00000412157 CYP27A1Q02318 531 aa12.48□□□□□ -0.41
SNRNP35-202ENST00000412157 GFPT1Q06210 699 aaPredicted RBP12.48□□□□□ -0.41
SNRNP35-202ENST00000412157 KIF5AQ12840 1032 aa12.48□□□□□ -0.41
SNRNP35-202ENST00000412157 NFX1Q12986 1120 aaKnown RBP12.48□□□□□ -0.41
SNRNP35-202ENST00000412157 CUL2Q13617 745 aa12.48□□□□□ -0.41
SNRNP35-202ENST00000412157 BMS1Q14692 1282 aaKnown RBP12.48□□□□□ -0.41
SNRNP35-202ENST00000412157 CCDC122Q5T0U0 273 aa12.48□□□□□ -0.41
SNRNP35-202ENST00000412157 SPOPLQ6IQ16 392 aa12.48□□□□□ -0.41
SNRNP35-202ENST00000412157 ZNF662Q6ZS27 426 aa12.48□□□□□ -0.41
SNRNP35-202ENST00000412157 ZNF571Q7Z3V5 609 aaPredicted RBP12.48□□□□□ -0.41
SNRNP35-202ENST00000412157 SLC43A3Q8NBI5 491 aa12.48□□□□□ -0.41
SNRNP35-202ENST00000412157 ZNF592Q92610 1267 aa12.48□□□□□ -0.41
SNRNP35-202ENST00000412157 TSPAN18Q96SJ8 248 aa12.48□□□□□ -0.41
SNRNP35-202ENST00000412157 APOL6Q9BWW8 343 aa12.48□□□□□ -0.41
SNRNP35-202ENST00000412157 RNF208Q9H0X6 261 aa12.48□□□□□ -0.41
SNRNP35-202ENST00000412157 PAK6Q9NQU5 681 aaPredicted RBP12.48□□□□□ -0.41
SNRNP35-202ENST00000412157 CHST12Q9NRB3 414 aa12.48□□□□□ -0.41
SNRNP35-202ENST00000412157 PARP2Q9UGN5 583 aa12.48□□□□□ -0.41
SNRNP35-202ENST00000412157 ATP8B3O60423 1300 aa12.47□□□□□ -0.41
SNRNP35-202ENST00000412157 A0A087X0T9 212 aa12.47□□□□□ -0.41
SNRNP35-202ENST00000412157 FAM228BP0C875 321 aa12.47□□□□□ -0.41
SNRNP35-202ENST00000412157 GHRP10912 638 aa12.47□□□□□ -0.41
SNRNP35-202ENST00000412157 ZSCAN20P17040 1043 aaPredicted RBP12.47□□□□□ -0.41
SNRNP35-202ENST00000412157 BPIFB4P59827 614 aa12.47□□□□□ -0.41
SNRNP35-202ENST00000412157 GNG11P61952 73 aa12.47□□□□□ -0.41
SNRNP35-202ENST00000412157 ETF1P62495 437 aaKnown RBP12.47□□□□□ -0.41
SNRNP35-202ENST00000412157 PAK2Q13177 524 aa12.47□□□□□ -0.41
SNRNP35-202ENST00000412157 TRIM71Q2Q1W2 868 aaKnown RBP12.47□□□□□ -0.41
SNRNP35-202ENST00000412157 ZNF667Q5HYK9 610 aa12.47□□□□□ -0.41
SNRNP35-202ENST00000412157 FAM26DQ5JW98 314 aa12.47□□□□□ -0.41
SNRNP35-202ENST00000412157 FBXO47Q5MNV8 452 aa12.47□□□□□ -0.41
SNRNP35-202ENST00000412157 UBXN11Q5T124 520 aa12.47□□□□□ -0.41
SNRNP35-202ENST00000412157 SMYD5Q6GMV2 418 aa12.47□□□□□ -0.41
SNRNP35-202ENST00000412157 FAM71AQ8IYT1 594 aa12.47□□□□□ -0.41
SNRNP35-202ENST00000412157 USP38Q8NB14 1042 aa12.47□□□□□ -0.41
SNRNP35-202ENST00000412157 BEST2Q8NFU1 509 aa12.47□□□□□ -0.41
SNRNP35-202ENST00000412157 KIF18AQ8NI77 898 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms