RNA–Protein interactions for RNA: ENST00000412061.3

BRCA1-204, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,312 nt, Biotype non stop decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-204ENST00000412061 ADAMTS17Q8TE56 1095 aa5.31□□□□□ -1.56
BRCA1-204ENST00000412061 HOXB13Q92826 284 aaPredicted RBP5.31□□□□□ -1.56
BRCA1-204ENST00000412061 KAT5Q92993 513 aa5.31□□□□□ -1.56
BRCA1-204ENST00000412061 PHKBQ93100 1093 aa5.31□□□□□ -1.56
BRCA1-204ENST00000412061 ARL8AQ96BM9 186 aa5.31□□□□□ -1.56
BRCA1-204ENST00000412061 UBXN10Q96LJ8 280 aa5.31□□□□□ -1.56
BRCA1-204ENST00000412061 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.31□□□□□ -1.56
BRCA1-204ENST00000412061 KIAA1683Q9H0B3 1180 aa5.31□□□□□ -1.56
BRCA1-204ENST00000412061 OR10A2Q9H208 303 aa5.31□□□□□ -1.56
BRCA1-204ENST00000412061 TLR9Q9NR96 1032 aa5.31□□□□□ -1.56
BRCA1-204ENST00000412061 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.31□□□□□ -1.56
BRCA1-204ENST00000412061 CTDP1Q9Y5B0 961 aaPredicted RBP5.31□□□□□ -1.56
BRCA1-204ENST00000412061 PCDHA13Q9Y5I0 950 aa5.31□□□□□ -1.56
BRCA1-204ENST00000412061 RBM8AQ9Y5S9 174 aaKnown RBP5.31□□□□□ -1.56
BRCA1-204ENST00000412061 SNX13Q9Y5W8 968 aa5.31□□□□□ -1.56
BRCA1-204ENST00000412061 C2orf78A6NCI8 922 aa5.3□□□□□ -1.56
BRCA1-204ENST00000412061 RRN3P2A6NIE6 340 aa5.3□□□□□ -1.56
BRCA1-204ENST00000412061 SLC16A6O15403 523 aa5.3□□□□□ -1.56
BRCA1-204ENST00000412061 ZNF888P0CJ79 500 aaPredicted RBP5.3□□□□□ -1.56
BRCA1-204ENST00000412061 TECP42680 631 aa5.3□□□□□ -1.56
BRCA1-204ENST00000412061 KIR2DL3P43628 341 aa5.3□□□□□ -1.56
BRCA1-204ENST00000412061 AGFG1P52594 562 aaKnown RBP5.3□□□□□ -1.56
BRCA1-204ENST00000412061 PER3P56645 1201 aa5.3□□□□□ -1.56
BRCA1-204ENST00000412061 NUCB1Q02818 461 aa5.3□□□□□ -1.56
BRCA1-204ENST00000412061 ZNF124Q15973 351 aa5.3□□□□□ -1.56
BRCA1-204ENST00000412061 KCNA10Q16322 511 aa5.3□□□□□ -1.56
BRCA1-204ENST00000412061 RETSATQ6NUM9 610 aa5.3□□□□□ -1.56
BRCA1-204ENST00000412061 PGBD2Q6P3X8 592 aa5.3□□□□□ -1.56
BRCA1-204ENST00000412061 GGT6Q6P531 493 aa5.3□□□□□ -1.56
BRCA1-204ENST00000412061 C16orf54Q6UWD8 224 aa5.3□□□□□ -1.56
BRCA1-204ENST00000412061 USP30Q70CQ3 517 aa5.3□□□□□ -1.56
BRCA1-204ENST00000412061 RALYLQ86SE5 291 aaKnown RBP5.3□□□□□ -1.56
BRCA1-204ENST00000412061 DAAM2Q86T65 1068 aa5.3□□□□□ -1.56
BRCA1-204ENST00000412061 COL23A1Q86Y22 540 aaPredicted RBP5.3□□□□□ -1.56
BRCA1-204ENST00000412061 TMEM151BQ8IW70 566 aa5.3□□□□□ -1.56
BRCA1-204ENST00000412061 ADGRG2Q8IZP9 1017 aa5.3□□□□□ -1.56
BRCA1-204ENST00000412061 CNPY4Q8N129 248 aa5.3□□□□□ -1.56
BRCA1-204ENST00000412061 LCORQ96JN0 433 aaPredicted RBP5.3□□□□□ -1.56
BRCA1-204ENST00000412061 UHRF1Q96T88 793 aaPredicted RBP5.3□□□□□ -1.56
BRCA1-204ENST00000412061 OSBPL5Q9H0X9 879 aaPredicted RBP5.3□□□□□ -1.56
BRCA1-204ENST00000412061 BCO1Q9HAY6 547 aa5.3□□□□□ -1.56
BRCA1-204ENST00000412061 TDP1Q9NUW8 608 aa5.3□□□□□ -1.56
BRCA1-204ENST00000412061 PDP2Q9P2J9 529 aa5.3□□□□□ -1.56
BRCA1-204ENST00000412061 MAGED2Q9UNF1 606 aaPredicted RBP5.3□□□□□ -1.56
BRCA1-204ENST00000412061 CRYL1Q9Y2S2 319 aa5.3□□□□□ -1.56
BRCA1-204ENST00000412061 ZDHHC9Q9Y397 364 aa5.3□□□□□ -1.56
BRCA1-204ENST00000412061 AFG3L2Q9Y4W6 797 aa5.3□□□□□ -1.56
BRCA1-204ENST00000412061 PCDHGB2Q9Y5G2 931 aa5.3□□□□□ -1.56
BRCA1-204ENST00000412061 A0A1B0GTL3 188 aa5.29□□□□□ -1.56
BRCA1-204ENST00000412061 EYA2O00167 538 aa5.29□□□□□ -1.56
BRCA1-204ENST00000412061 MTSS1O43312 755 aa5.29□□□□□ -1.56
BRCA1-204ENST00000412061 GASTP01350 101 aa5.29□□□□□ -1.56
BRCA1-204ENST00000412061 FTLP02792 175 aaPredicted RBP5.29□□□□□ -1.56
BRCA1-204ENST00000412061 STT3AP46977 705 aa5.29□□□□□ -1.56
BRCA1-204ENST00000412061 MPP1Q00013 466 aa5.29□□□□□ -1.56
BRCA1-204ENST00000412061 CDC42EP1Q00587 391 aa5.29□□□□□ -1.56
BRCA1-204ENST00000412061 DSC2Q02487 901 aa5.29□□□□□ -1.56
BRCA1-204ENST00000412061 POLD3Q15054 466 aaPredicted RBP5.29□□□□□ -1.56
BRCA1-204ENST00000412061 ZNF568Q3ZCX4 644 aa5.29□□□□□ -1.56
BRCA1-204ENST00000412061 TTLL5Q6EMB2 1281 aa5.29□□□□□ -1.56
BRCA1-204ENST00000412061 FAAH2Q6GMR7 532 aa5.29□□□□□ -1.56
BRCA1-204ENST00000412061 PDXDC1Q6P996 788 aa5.29□□□□□ -1.56
BRCA1-204ENST00000412061 Q6ZVL8 140 aa5.29□□□□□ -1.56
BRCA1-204ENST00000412061 MAEAQ7L5Y9 396 aa5.29□□□□□ -1.56
BRCA1-204ENST00000412061 PQLC1Q8N2U9 271 aa5.29□□□□□ -1.56
BRCA1-204ENST00000412061 LINC01356Q8N9X3 169 aa5.29□□□□□ -1.56
BRCA1-204ENST00000412061 OR7D4Q8NG98 312 aa5.29□□□□□ -1.56
BRCA1-204ENST00000412061 RGMAQ96B86 450 aa5.29□□□□□ -1.56
BRCA1-204ENST00000412061 CYFIP2Q96F07 1278 aa5.29□□□□□ -1.56
BRCA1-204ENST00000412061 SLC26A6Q9BXS9 759 aa5.29□□□□□ -1.56
BRCA1-204ENST00000412061 RSPH9Q9H1X1 276 aaPredicted RBP5.29□□□□□ -1.56
BRCA1-204ENST00000412061 SLC6A15Q9H2J7 730 aa5.29□□□□□ -1.56
BRCA1-204ENST00000412061 ITM2CQ9NQX7 267 aa5.29□□□□□ -1.56
BRCA1-204ENST00000412061 STARD7Q9NQZ5 370 aa5.29□□□□□ -1.56
BRCA1-204ENST00000412061 RASSF1Q9NS23 344 aa5.29□□□□□ -1.56
BRCA1-204ENST00000412061 ING3Q9NXR8 418 aa5.29□□□□□ -1.56
BRCA1-204ENST00000412061 GPRC5DQ9NZD1 345 aa5.29□□□□□ -1.56
BRCA1-204ENST00000412061 NOL7Q9UMY1 257 aaKnown RBP5.29□□□□□ -1.56
BRCA1-204ENST00000412061 PCDHB1Q9Y5F3 818 aa5.29□□□□□ -1.56
BRCA1-204ENST00000412061 ITIH6Q6UXX5 1313 aa5.29□□□□□ -1.56
BRCA1-204ENST00000412061 NPIPB6E9PJ23 425 aa5.28□□□□□ -1.56
BRCA1-204ENST00000412061 NRP1O14786 923 aa5.28□□□□□ -1.56
BRCA1-204ENST00000412061 ADAMTS3O15072 1205 aa5.28□□□□□ -1.56
BRCA1-204ENST00000412061 ORC4O43929 436 aa5.28□□□□□ -1.56
BRCA1-204ENST00000412061 TOX4O94842 621 aa5.28□□□□□ -1.56
BRCA1-204ENST00000412061 CNOT4O95628 575 aaKnown RBP5.28□□□□□ -1.56
BRCA1-204ENST00000412061 CD4P01730 458 aa5.28□□□□□ -1.56
BRCA1-204ENST00000412061 CSTBP04080 98 aaKnown RBP5.28□□□□□ -1.56
BRCA1-204ENST00000412061 JUNP05412 331 aaKnown RBP5.28□□□□□ -1.56
BRCA1-204ENST00000412061 DHRS4L1P0CG22 281 aa5.28□□□□□ -1.56
BRCA1-204ENST00000412061 VSIG10L2P0DP72 767 aa5.28□□□□□ -1.56
BRCA1-204ENST00000412061 MYF5P13349 255 aa5.28□□□□□ -1.56
BRCA1-204ENST00000412061 GYPEP15421 78 aa5.28□□□□□ -1.56
BRCA1-204ENST00000412061 CAPN3P20807 821 aa5.28□□□□□ -1.56
BRCA1-204ENST00000412061 CRHR1P34998 444 aa5.28□□□□□ -1.56
BRCA1-204ENST00000412061 RAP1GAPP47736 663 aa5.28□□□□□ -1.56
BRCA1-204ENST00000412061 SLC6A9P48067 706 aa5.28□□□□□ -1.56
BRCA1-204ENST00000412061 BPIFB4P59827 614 aa5.28□□□□□ -1.56
BRCA1-204ENST00000412061 DUSP2Q05923 314 aa5.28□□□□□ -1.56
BRCA1-204ENST00000412061 STARD3Q14849 445 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms