RNA–Protein interactions for RNA: ENST00000411913.1

HMGB3P2-201, Transcript of high mobility group box 3 pseudogene 2, humanhuman

BASIC

Gene HMGB3P2, Length 584 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P2-201ENST00000411913 UBXN2BQ14CS0 331 aa3.4□□□□□ -1.87
HMGB3P2-201ENST00000411913 GEN1Q17RS7 908 aa3.4□□□□□ -1.87
HMGB3P2-201ENST00000411913 FAM153CQ494X1 144 aa3.4□□□□□ -1.87
HMGB3P2-201ENST00000411913 LCE1EQ5T753 118 aa3.4□□□□□ -1.87
HMGB3P2-201ENST00000411913 GPR158Q5T848 1215 aa3.4□□□□□ -1.87
HMGB3P2-201ENST00000411913 SLC9A4Q6AI14 798 aa3.4□□□□□ -1.87
HMGB3P2-201ENST00000411913 ZNF572Q7Z3I7 529 aaPredicted RBP3.4□□□□□ -1.87
HMGB3P2-201ENST00000411913 KIF18BQ86Y91 864 aa3.4□□□□□ -1.87
HMGB3P2-201ENST00000411913 LYSMD2Q8IV50 215 aa3.4□□□□□ -1.87
HMGB3P2-201ENST00000411913 ZNF610Q8N9Z0 462 aa3.4□□□□□ -1.87
HMGB3P2-201ENST00000411913 FBXO18Q8NFZ0 1043 aa3.4□□□□□ -1.87
HMGB3P2-201ENST00000411913 TFAP2BQ92481 460 aa3.4□□□□□ -1.87
HMGB3P2-201ENST00000411913 BRINP2Q9C0B6 783 aa3.4□□□□□ -1.87
HMGB3P2-201ENST00000411913 CDY2AQ9Y6F7 541 aa3.4□□□□□ -1.87
HMGB3P2-201ENST00000411913 AOX1Q06278 1338 aa3.4□□□□□ -1.87
HMGB3P2-201ENST00000411913 H3BNC9 293 aa3.39□□□□□ -1.87
HMGB3P2-201ENST00000411913 PPP1R12AO14974 1030 aaPredicted RBP3.39□□□□□ -1.87
HMGB3P2-201ENST00000411913 MPPED1O15442 326 aa3.39□□□□□ -1.87
HMGB3P2-201ENST00000411913 AKR1B10O60218 316 aa3.39□□□□□ -1.87
HMGB3P2-201ENST00000411913 RAB11FIP3O75154 756 aa3.39□□□□□ -1.87
HMGB3P2-201ENST00000411913 ASMTLO95671 621 aa3.39□□□□□ -1.87
HMGB3P2-201ENST00000411913 CKBP12277 381 aa3.39□□□□□ -1.87
HMGB3P2-201ENST00000411913 ALOX15P16050 662 aaPredicted RBP3.39□□□□□ -1.87
HMGB3P2-201ENST00000411913 ATP5JP18859 108 aa3.39□□□□□ -1.87
HMGB3P2-201ENST00000411913 SDSP20132 328 aa3.39□□□□□ -1.87
HMGB3P2-201ENST00000411913 SLC6A2P23975 617 aa3.39□□□□□ -1.87
HMGB3P2-201ENST00000411913 SREBF1P36956 1147 aa3.39□□□□□ -1.87
HMGB3P2-201ENST00000411913 MANFP55145 182 aaKnown RBP3.39□□□□□ -1.87
HMGB3P2-201ENST00000411913 LGALS4P56470 323 aa3.39□□□□□ -1.87
HMGB3P2-201ENST00000411913 TKFCQ3LXA3 575 aa3.39□□□□□ -1.87
HMGB3P2-201ENST00000411913 TMEM119Q4V9L6 283 aa3.39□□□□□ -1.87
HMGB3P2-201ENST00000411913 AFMIDQ63HM1 303 aa3.39□□□□□ -1.87
HMGB3P2-201ENST00000411913 KIAA0895LQ68EN5 471 aa3.39□□□□□ -1.87
HMGB3P2-201ENST00000411913 FRMD7Q6ZUT3 714 aa3.39□□□□□ -1.87
HMGB3P2-201ENST00000411913 ANKRD13AQ8IZ07 590 aa3.39□□□□□ -1.87
HMGB3P2-201ENST00000411913 TRMT2AQ8IZ69 625 aaKnown RBP3.39□□□□□ -1.87
HMGB3P2-201ENST00000411913 SEMA6DQ8NFY4 1073 aa3.39□□□□□ -1.87
HMGB3P2-201ENST00000411913 DENND1AQ8TEH3 1009 aa3.39□□□□□ -1.87
HMGB3P2-201ENST00000411913 HAPLN3Q96S86 360 aa3.39□□□□□ -1.87
HMGB3P2-201ENST00000411913 UHRF1Q96T88 793 aaPredicted RBP3.39□□□□□ -1.87
HMGB3P2-201ENST00000411913 MS4A5Q9H3V2 200 aa3.39□□□□□ -1.87
HMGB3P2-201ENST00000411913 SPC25Q9HBM1 224 aa3.39□□□□□ -1.87
HMGB3P2-201ENST00000411913 MOCS1Q9NZB8 636 aa3.39□□□□□ -1.87
HMGB3P2-201ENST00000411913 ZNF580Q9UK33 172 aa3.39□□□□□ -1.87
HMGB3P2-201ENST00000411913 ST3GAL5Q9UNP4 418 aa3.39□□□□□ -1.87
HMGB3P2-201ENST00000411913 PLAAQ9Y263 795 aa3.39□□□□□ -1.87
HMGB3P2-201ENST00000411913 CCDC180Q9P1Z9 1646 aa3.39□□□□□ -1.87
HMGB3P2-201ENST00000411913 ZNF891A8MT65 544 aaPredicted RBP3.38□□□□□ -1.87
HMGB3P2-201ENST00000411913 PPM1GO15355 546 aaPredicted RBP3.38□□□□□ -1.87
HMGB3P2-201ENST00000411913 KPNA6O60684 536 aa3.38□□□□□ -1.87
HMGB3P2-201ENST00000411913 MOSPD3O75425 235 aa3.38□□□□□ -1.87
HMGB3P2-201ENST00000411913 RFPL3O75679 317 aa3.38□□□□□ -1.87
HMGB3P2-201ENST00000411913 PRSS23O95084 383 aa3.38□□□□□ -1.87
HMGB3P2-201ENST00000411913 NTN1O95631 604 aa3.38□□□□□ -1.87
HMGB3P2-201ENST00000411913 SNHG28P0DPA3 235 aa3.38□□□□□ -1.87
HMGB3P2-201ENST00000411913 NEK4P51957 841 aa3.38□□□□□ -1.87
HMGB3P2-201ENST00000411913 POLGP54098 1239 aaPredicted RBP3.38□□□□□ -1.87
HMGB3P2-201ENST00000411913 FOXG1P55316 489 aaPredicted RBP3.38□□□□□ -1.87
HMGB3P2-201ENST00000411913 SP140Q13342 867 aa3.38□□□□□ -1.87
HMGB3P2-201ENST00000411913 SART3Q15020 963 aaKnown RBP3.38□□□□□ -1.87
HMGB3P2-201ENST00000411913 PTPROQ16827 1216 aa3.38□□□□□ -1.87
HMGB3P2-201ENST00000411913 MST1LQ2TV78 715 aa3.38□□□□□ -1.87
HMGB3P2-201ENST00000411913 NBPF8Q3BBV2 869 aa3.38□□□□□ -1.87
HMGB3P2-201ENST00000411913 DALRD3Q5D0E6 543 aaKnown RBP3.38□□□□□ -1.87
HMGB3P2-201ENST00000411913 VWA1Q6PCB0 445 aa3.38□□□□□ -1.87
HMGB3P2-201ENST00000411913 TECPR1Q7Z6L1 1165 aa3.38□□□□□ -1.87
HMGB3P2-201ENST00000411913 SLC41A1Q8IVJ1 513 aa3.38□□□□□ -1.87
HMGB3P2-201ENST00000411913 ZCRB1Q8TBF4 217 aaKnown RBP3.38□□□□□ -1.87
HMGB3P2-201ENST00000411913 MARS2Q96GW9 593 aaKnown RBP3.38□□□□□ -1.87
HMGB3P2-201ENST00000411913 ORAI3Q9BRQ5 295 aa3.38□□□□□ -1.87
HMGB3P2-201ENST00000411913 SIK3Q9Y2K2 1263 aa3.38□□□□□ -1.87
HMGB3P2-201ENST00000411913 ATRNL1Q5VV63 1379 aa3.38□□□□□ -1.87
HMGB3P2-201ENST00000411913 LINC01548A6NM66 108 aa3.37□□□□□ -1.87
HMGB3P2-201ENST00000411913 KDM1AO60341 852 aa3.37□□□□□ -1.87
HMGB3P2-201ENST00000411913 LPLP06858 475 aa3.37□□□□□ -1.87
HMGB3P2-201ENST00000411913 IBSPP21815 317 aaPredicted RBP3.37□□□□□ -1.87
HMGB3P2-201ENST00000411913 MASP1P48740 699 aa3.37□□□□□ -1.87
HMGB3P2-201ENST00000411913 PER3P56645 1201 aa3.37□□□□□ -1.87
HMGB3P2-201ENST00000411913 PHC1P78364 1004 aa3.37□□□□□ -1.87
HMGB3P2-201ENST00000411913 DSG1Q02413 1049 aa3.37□□□□□ -1.87
HMGB3P2-201ENST00000411913 PITRM1Q5JRX3 1037 aa3.37□□□□□ -1.87
HMGB3P2-201ENST00000411913 MORN5Q5VZ52 161 aa3.37□□□□□ -1.87
HMGB3P2-201ENST00000411913 SUMO4Q6EEV6 95 aa3.37□□□□□ -1.87
HMGB3P2-201ENST00000411913 ZNF529Q6P280 563 aa3.37□□□□□ -1.87
HMGB3P2-201ENST00000411913 TOR1AIP2Q8NFQ8 470 aa3.37□□□□□ -1.87
HMGB3P2-201ENST00000411913 OR7D4Q8NG98 312 aa3.37□□□□□ -1.87
HMGB3P2-201ENST00000411913 STON2Q8WXE9 905 aa3.37□□□□□ -1.87
HMGB3P2-201ENST00000411913 NINJ1Q92982 152 aa3.37□□□□□ -1.87
HMGB3P2-201ENST00000411913 GPATCH3Q96I76 525 aa3.37□□□□□ -1.87
HMGB3P2-201ENST00000411913 GPR101Q96P66 508 aaPredicted RBP3.37□□□□□ -1.87
HMGB3P2-201ENST00000411913 MED15Q96RN5 788 aa3.37□□□□□ -1.87
HMGB3P2-201ENST00000411913 PNKPQ96T60 521 aa3.37□□□□□ -1.87
HMGB3P2-201ENST00000411913 SEMA4CQ9C0C4 833 aa3.37□□□□□ -1.87
HMGB3P2-201ENST00000411913 KCTD10Q9H3F6 313 aa3.37□□□□□ -1.87
HMGB3P2-201ENST00000411913 PRDM12Q9H4Q4 367 aa3.37□□□□□ -1.87
HMGB3P2-201ENST00000411913 BCO1Q9HAY6 547 aa3.37□□□□□ -1.87
HMGB3P2-201ENST00000411913 ANLNQ9NQW6 1124 aa3.37□□□□□ -1.87
HMGB3P2-201ENST00000411913 MAGEC2Q9UBF1 373 aaPredicted RBP3.37□□□□□ -1.87
HMGB3P2-201ENST00000411913 PADI4Q9UM07 663 aa3.37□□□□□ -1.87
HMGB3P2-201ENST00000411913 BTBD3Q9Y2F9 522 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms