RNA–Protein interactions for RNA: ENST00000410828.1

RNU4-53P-201, Transcript of RNA, U4 small nuclear 53, pseudogene, humanhuman

BASIC

Gene RNU4-53P, Length 140 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-53P-201ENST00000410828 XKR9Q5GH70 373 aa2.62□□□□□ -1.99
RNU4-53P-201ENST00000410828 PRSS36Q5K4E3 855 aa2.62□□□□□ -1.99
RNU4-53P-201ENST00000410828 TTC22Q5TAA0 569 aa2.62□□□□□ -1.99
RNU4-53P-201ENST00000410828 RNF20Q5VTR2 975 aa2.62□□□□□ -1.99
RNU4-53P-201ENST00000410828 PPP4R3AQ6IN85 833 aa2.62□□□□□ -1.99
RNU4-53P-201ENST00000410828 TCEAL6Q6IPX3 200 aa2.62□□□□□ -1.99
RNU4-53P-201ENST00000410828 SLC8B1Q6J4K2 584 aa2.62□□□□□ -1.99
RNU4-53P-201ENST00000410828 TXNDC11Q6PKC3 985 aa2.62□□□□□ -1.99
RNU4-53P-201ENST00000410828 POTEHQ6S545 545 aa2.62□□□□□ -1.99
RNU4-53P-201ENST00000410828 MOXD1Q6UVY6 613 aa2.62□□□□□ -1.99
RNU4-53P-201ENST00000410828 B3GNT9Q6UX72 402 aa2.62□□□□□ -1.99
RNU4-53P-201ENST00000410828 VITQ6UXI7 678 aa2.62□□□□□ -1.99
RNU4-53P-201ENST00000410828 DHX32Q7L7V1 743 aaKnown RBP2.62□□□□□ -1.99
RNU4-53P-201ENST00000410828 PDZD3Q86UT5 571 aa2.62□□□□□ -1.99
RNU4-53P-201ENST00000410828 C11orf74Q86VG3 221 aa2.62□□□□□ -1.99
RNU4-53P-201ENST00000410828 PROSER1Q86XN7 944 aa2.62□□□□□ -1.99
RNU4-53P-201ENST00000410828 IFNLR1Q8IU57 520 aaPredicted RBP2.62□□□□□ -1.99
RNU4-53P-201ENST00000410828 C4orf19Q8IY42 314 aa2.62□□□□□ -1.99
RNU4-53P-201ENST00000410828 TCEAL8Q8IYN2 117 aa2.62□□□□□ -1.99
RNU4-53P-201ENST00000410828 CAMKK1Q8N5S9 505 aa2.62□□□□□ -1.99
RNU4-53P-201ENST00000410828 ZNF579Q8NAF0 562 aaKnown RBP2.62□□□□□ -1.99
RNU4-53P-201ENST00000410828 CCDC148Q8NFR7 591 aa2.62□□□□□ -1.99
RNU4-53P-201ENST00000410828 TBCKQ8TEA7 893 aa2.62□□□□□ -1.99
RNU4-53P-201ENST00000410828 TCEAL3Q969E4 200 aa2.62□□□□□ -1.99
RNU4-53P-201ENST00000410828 GJA10Q969M2 543 aa2.62□□□□□ -1.99
RNU4-53P-201ENST00000410828 TCEAL4Q96EI5 215 aa2.62□□□□□ -1.99
RNU4-53P-201ENST00000410828 CPB2Q96IY4 423 aa2.62□□□□□ -1.99
RNU4-53P-201ENST00000410828 ZSWIM3Q96MP5 696 aa2.62□□□□□ -1.99
RNU4-53P-201ENST00000410828 TMEM209Q96SK2 561 aa2.62□□□□□ -1.99
RNU4-53P-201ENST00000410828 MTRQ99707 1265 aa2.62□□□□□ -1.99
RNU4-53P-201ENST00000410828 PAAF1Q9BRP4 392 aa2.62□□□□□ -1.99
RNU4-53P-201ENST00000410828 NFKBIZQ9BYH8 718 aa2.62□□□□□ -1.99
RNU4-53P-201ENST00000410828 LRRC2Q9BYS8 371 aa2.62□□□□□ -1.99
RNU4-53P-201ENST00000410828 SLKQ9H2G2 1235 aaPredicted RBP2.62□□□□□ -1.99
RNU4-53P-201ENST00000410828 SMOC1Q9H4F8 434 aa2.62□□□□□ -1.99
RNU4-53P-201ENST00000410828 SLC32A1Q9H598 525 aa2.62□□□□□ -1.99
RNU4-53P-201ENST00000410828 ZSWIM4Q9H7M6 989 aa2.62□□□□□ -1.99
RNU4-53P-201ENST00000410828 TRPV4Q9HBA0 871 aa2.62□□□□□ -1.99
RNU4-53P-201ENST00000410828 CYP4F11Q9HBI6 524 aa2.62□□□□□ -1.99
RNU4-53P-201ENST00000410828 TMEM9BQ9NQ34 198 aa2.62□□□□□ -1.99
RNU4-53P-201ENST00000410828 ASAH2Q9NR71 780 aa2.62□□□□□ -1.99
RNU4-53P-201ENST00000410828 BMP2KQ9NSY1 1161 aaPredicted RBP2.62□□□□□ -1.99
RNU4-53P-201ENST00000410828 C2orf42Q9NWW7 574 aa2.62□□□□□ -1.99
RNU4-53P-201ENST00000410828 CACNG4Q9UBN1 327 aa2.62□□□□□ -1.99
RNU4-53P-201ENST00000410828 DAXXQ9UER7 740 aaPredicted RBP2.62□□□□□ -1.99
RNU4-53P-201ENST00000410828 BRPF3Q9ULD4 1205 aa2.62□□□□□ -1.99
RNU4-53P-201ENST00000410828 NAP1L2Q9ULW6 460 aaPredicted RBP2.62□□□□□ -1.99
RNU4-53P-201ENST00000410828 MAFFQ9ULX9 164 aa2.62□□□□□ -1.99
RNU4-53P-201ENST00000410828 SLC8A2Q9UPR5 921 aa2.62□□□□□ -1.99
RNU4-53P-201ENST00000410828 MSRB2Q9Y3D2 182 aa2.62□□□□□ -1.99
RNU4-53P-201ENST00000410828 INSL5Q9Y5Q6 135 aa2.62□□□□□ -1.99
RNU4-53P-201ENST00000410828 CDY1Q9Y6F8 540 aa2.62□□□□□ -1.99
RNU4-53P-201ENST00000410828 SPAG17Q6Q759 2223 aa2.62□□□□□ -1.99
RNU4-53P-201ENST00000410828 ASH1LQ9NR48 2969 aaKnown RBP2.62□□□□□ -1.99
RNU4-53P-201ENST00000410828 SPTAN1Q13813 2472 aaKnown RBP2.62□□□□□ -1.99
RNU4-53P-201ENST00000410828 DSPP15924 2871 aaKnown RBP2.62□□□□□ -1.99
RNU4-53P-201ENST00000410828 PTPRQQ9UMZ3 2332 aa2.62□□□□□ -1.99
RNU4-53P-201ENST00000410828 C2orf16Q68DN1 1984 aa2.61□□□□□ -1.99
RNU4-53P-201ENST00000410828 PTPN13Q12923 2485 aa2.61□□□□□ -1.99
RNU4-53P-201ENST00000410828 CYP3A7-CYP3A51PA0A087WV96 503 aa2.61□□□□□ -1.99
RNU4-53P-201ENST00000410828 KLF18A0A0U1RQI7 1052 aa2.61□□□□□ -1.99
RNU4-53P-201ENST00000410828 A0A1W2PRU2 124 aa2.61□□□□□ -1.99
RNU4-53P-201ENST00000410828 LNP1A1A4G5 178 aa2.61□□□□□ -1.99
RNU4-53P-201ENST00000410828 FAM221BA6H8Z2 402 aa2.61□□□□□ -1.99
RNU4-53P-201ENST00000410828 H7C4K7 107 aa2.61□□□□□ -1.99
RNU4-53P-201ENST00000410828 EML1O00423 815 aa2.61□□□□□ -1.99
RNU4-53P-201ENST00000410828 NRG2O14511 850 aaPredicted RBP2.61□□□□□ -1.99
RNU4-53P-201ENST00000410828 CDX4O14627 284 aaPredicted RBP2.61□□□□□ -1.99
RNU4-53P-201ENST00000410828 PTGESO14684 152 aa2.61□□□□□ -1.99
RNU4-53P-201ENST00000410828 SYN3O14994 580 aa2.61□□□□□ -1.99
RNU4-53P-201ENST00000410828 N4BP3O15049 544 aa2.61□□□□□ -1.99
RNU4-53P-201ENST00000410828 TBX3O15119 743 aa2.61□□□□□ -1.99
RNU4-53P-201ENST00000410828 B4GALT5O43286 388 aa2.61□□□□□ -1.99
RNU4-53P-201ENST00000410828 EDIL3O43854 480 aa2.61□□□□□ -1.99
RNU4-53P-201ENST00000410828 MARCH6O60337 910 aa2.61□□□□□ -1.99
RNU4-53P-201ENST00000410828 MOSPD3O75425 235 aa2.61□□□□□ -1.99
RNU4-53P-201ENST00000410828 DGAT1O75907 488 aa2.61□□□□□ -1.99
RNU4-53P-201ENST00000410828 RECQL4O94761 1208 aa2.61□□□□□ -1.99
RNU4-53P-201ENST00000410828 ZIC2O95409 532 aaPredicted RBP2.61□□□□□ -1.99
RNU4-53P-201ENST00000410828 SEC24AO95486 1093 aa2.61□□□□□ -1.99
RNU4-53P-201ENST00000410828 TDP2O95551 362 aa2.61□□□□□ -1.99
RNU4-53P-201ENST00000410828 APBB3O95704 486 aa2.61□□□□□ -1.99
RNU4-53P-201ENST00000410828 IGHDP01880 384 aa2.61□□□□□ -1.99
RNU4-53P-201ENST00000410828 PRKCBP05771 671 aa2.61□□□□□ -1.99
RNU4-53P-201ENST00000410828 HMGB1P09429 215 aaKnown RBP2.61□□□□□ -1.99
RNU4-53P-201ENST00000410828 GJA1P17302 382 aa2.61□□□□□ -1.99
RNU4-53P-201ENST00000410828 GLRA2P23416 452 aa2.61□□□□□ -1.99
RNU4-53P-201ENST00000410828 CYP3A7P24462 503 aa2.61□□□□□ -1.99
RNU4-53P-201ENST00000410828 TKTP29401 623 aaKnown RBP2.61□□□□□ -1.99
RNU4-53P-201ENST00000410828 CDC27P30260 824 aa2.61□□□□□ -1.99
RNU4-53P-201ENST00000410828 HOXC13P31276 330 aa2.61□□□□□ -1.99
RNU4-53P-201ENST00000410828 ADD1P35611 737 aaKnown RBP2.61□□□□□ -1.99
RNU4-53P-201ENST00000410828 ARL2P36404 184 aa2.61□□□□□ -1.99
RNU4-53P-201ENST00000410828 CCR2P41597 374 aa2.61□□□□□ -1.99
RNU4-53P-201ENST00000410828 SOX9P48436 509 aa2.61□□□□□ -1.99
RNU4-53P-201ENST00000410828 CLCNKBP51801 687 aa2.61□□□□□ -1.99
RNU4-53P-201ENST00000410828 ATXN3P54252 364 aaPredicted RBP2.61□□□□□ -1.99
RNU4-53P-201ENST00000410828 EPHA5P54756 1037 aa2.61□□□□□ -1.99
RNU4-53P-201ENST00000410828 SIM1P81133 766 aaPredicted RBP2.61□□□□□ -1.99
RNU4-53P-201ENST00000410828 FGD1P98174 961 aa2.61□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms