RNA–Protein interactions for RNA: ENST00000409954.6

MCF2L-210, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 574 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-210ENST00000409954 RFX1P22670 979 aa15.85■□□□□ 0.13
MCF2L-210ENST00000409954 MARCKSP29966 332 aaPredicted RBP15.85■□□□□ 0.13
MCF2L-210ENST00000409954 HTR4Q13639 388 aa15.85■□□□□ 0.13
MCF2L-210ENST00000409954 NOLC1Q14978 699 aaKnown RBP eCLIP15.85■□□□□ 0.133e-6■■■■■ 34
MCF2L-210ENST00000409954 VARS2Q5ST30 1063 aaKnown RBP15.85■□□□□ 0.13
MCF2L-210ENST00000409954 TPGS2Q68CL5 300 aa15.85■□□□□ 0.13
MCF2L-210ENST00000409954 CWF19L1Q69YN2 538 aaKnown RBP15.85■□□□□ 0.13
MCF2L-210ENST00000409954 RSPO2Q6UXX9 243 aaPredicted RBP15.85■□□□□ 0.13
MCF2L-210ENST00000409954 C3orf58Q8NDZ4 430 aa15.85■□□□□ 0.13
MCF2L-210ENST00000409954 APPL2Q8NEU8 664 aa15.85■□□□□ 0.13
MCF2L-210ENST00000409954 FGF13Q92913 245 aa15.85■□□□□ 0.13
MCF2L-210ENST00000409954 SUSD3Q96L08 255 aa15.85■□□□□ 0.13
MCF2L-210ENST00000409954 OXCT2Q9BYC2 517 aaPredicted RBP15.85■□□□□ 0.13
MCF2L-210ENST00000409954 AVENQ9NQS1 362 aaPredicted RBP15.85■□□□□ 0.13
MCF2L-210ENST00000409954 DNMT3BQ9UBC3 853 aaKnown RBP15.85■□□□□ 0.13
MCF2L-210ENST00000409954 NUMBLQ9Y6R0 609 aa15.85■□□□□ 0.13
MCF2L-210ENST00000409954 ARHGEF37A1IGU5 675 aa15.84■□□□□ 0.13
MCF2L-210ENST00000409954 KRBA1A5PL33 1030 aa15.84■□□□□ 0.13
MCF2L-210ENST00000409954 CD2BP2O95400 341 aaKnown RBP15.84■□□□□ 0.13
MCF2L-210ENST00000409954 ATF2P15336 505 aa15.84■□□□□ 0.13
MCF2L-210ENST00000409954 CYP3A5P20815 502 aa15.84■□□□□ 0.13
MCF2L-210ENST00000409954 PDCP20941 246 aa15.84■□□□□ 0.13
MCF2L-210ENST00000409954 NBL1P41271 181 aa15.84■□□□□ 0.13
MCF2L-210ENST00000409954 MATR3P43243 847 aaKnown RBP eCLIP15.84■□□□□ 0.13
MCF2L-210ENST00000409954 NCKAP1LP55160 1127 aa15.84■□□□□ 0.13
MCF2L-210ENST00000409954 PABPC1LQ4VXU2 614 aaKnown RBP15.84■□□□□ 0.13
MCF2L-210ENST00000409954 CCDC105Q8IYK2 499 aa15.84■□□□□ 0.13
MCF2L-210ENST00000409954 MYCT1Q8N699 235 aa15.84■□□□□ 0.13
MCF2L-210ENST00000409954 DTWD2Q8NBA8 298 aa15.84■□□□□ 0.13
MCF2L-210ENST00000409954 GPR152Q8TDT2 470 aa15.84■□□□□ 0.13
MCF2L-210ENST00000409954 TBC1D32Q96NH3 1257 aa15.84■□□□□ 0.13
MCF2L-210ENST00000409954 FAM86C1Q9NVL1 165 aa15.84■□□□□ 0.13
MCF2L-210ENST00000409954 ANKFY1Q9P2R3 1169 aa15.84■□□□□ 0.13
MCF2L-210ENST00000409954 I3L4J1 428 aa15.83■□□□□ 0.12
MCF2L-210ENST00000409954 XPOTO43592 962 aaKnown RBP15.83■□□□□ 0.12
MCF2L-210ENST00000409954 GFRA3O60609 400 aa15.83■□□□□ 0.12
MCF2L-210ENST00000409954 FAM13AO94988 1023 aa15.83■□□□□ 0.12
MCF2L-210ENST00000409954 LRG1P02750 347 aa15.83■□□□□ 0.12
MCF2L-210ENST00000409954 HARSP12081 509 aaKnown RBP15.83■□□□□ 0.12
MCF2L-210ENST00000409954 PAX3P23760 479 aa15.83■□□□□ 0.12
MCF2L-210ENST00000409954 DDIT3P35638 169 aa15.83■□□□□ 0.12
MCF2L-210ENST00000409954 NTHL1P78549 312 aa15.83■□□□□ 0.12
MCF2L-210ENST00000409954 ROR1Q01973 937 aa15.83■□□□□ 0.12
MCF2L-210ENST00000409954 ZBTB6Q15916 424 aa15.83■□□□□ 0.12
MCF2L-210ENST00000409954 PARM1Q6UWI2 310 aa15.83■□□□□ 0.12
MCF2L-210ENST00000409954 CD302Q8IX05 232 aa15.83■□□□□ 0.12
MCF2L-210ENST00000409954 TCEAL8Q8IYN2 117 aa15.83■□□□□ 0.12
MCF2L-210ENST00000409954 C18orf25Q96B23 403 aaPredicted RBP15.83■□□□□ 0.12
MCF2L-210ENST00000409954 BICD1Q96G01 975 aa15.83■□□□□ 0.12
MCF2L-210ENST00000409954 PARVGQ9HBI0 331 aa15.83■□□□□ 0.12
MCF2L-210ENST00000409954 GDE1Q9NZC3 331 aa15.83■□□□□ 0.12
MCF2L-210ENST00000409954 TBX20Q9UMR3 447 aa15.83■□□□□ 0.12
MCF2L-210ENST00000409954 MRPS23Q9Y3D9 190 aaKnown RBP15.83■□□□□ 0.12
MCF2L-210ENST00000409954 SIT1Q9Y3P8 196 aa15.83■□□□□ 0.12
MCF2L-210ENST00000409954 CACNA1HO95180 2353 aa15.83■□□□□ 0.12
MCF2L-210ENST00000409954 NPHP3-ACAD11A0A0J9YXS1 232 aa15.82■□□□□ 0.12
MCF2L-210ENST00000409954 TTC26A0AVF1 554 aa15.82■□□□□ 0.12
MCF2L-210ENST00000409954 PRRG1O14668 218 aa15.82■□□□□ 0.12
MCF2L-210ENST00000409954 ZNF197O14709 1029 aa15.82■□□□□ 0.12
MCF2L-210ENST00000409954 TRAK2O60296 914 aa15.82■□□□□ 0.12
MCF2L-210ENST00000409954 MICAL2O94851 1124 aa15.82■□□□□ 0.12
MCF2L-210ENST00000409954 PIGRP01833 764 aa15.82■□□□□ 0.12
MCF2L-210ENST00000409954 LRPAP1P30533 357 aa15.82■□□□□ 0.12
MCF2L-210ENST00000409954 LIG4P49917 911 aa15.82■□□□□ 0.12
MCF2L-210ENST00000409954 ZNF131P52739 623 aa15.82■□□□□ 0.12
MCF2L-210ENST00000409954 STARD6P59095 220 aa15.82■□□□□ 0.12
MCF2L-210ENST00000409954 GPC5P78333 572 aa15.82■□□□□ 0.12
MCF2L-210ENST00000409954 PFKPQ01813 784 aa15.82■□□□□ 0.12
MCF2L-210ENST00000409954 SF3A1Q15459 793 aaKnown RBP15.82■□□□□ 0.12
MCF2L-210ENST00000409954 CTXN3Q4LDR2 81 aa15.82■□□□□ 0.12
MCF2L-210ENST00000409954 GPBP1Q86WP2 473 aa15.82■□□□□ 0.12
MCF2L-210ENST00000409954 ITFG1Q8TB96 612 aa15.82■□□□□ 0.12
MCF2L-210ENST00000409954 FGF14Q92915 247 aa15.82■□□□□ 0.12
MCF2L-210ENST00000409954 CCSER1Q9C0I3 900 aa15.82■□□□□ 0.12
MCF2L-210ENST00000409954 FBXL5Q9UKA1 691 aa15.82■□□□□ 0.12
MCF2L-210ENST00000409954 CA14Q9ULX7 337 aa15.82■□□□□ 0.12
MCF2L-210ENST00000409954 UBQLN1Q9UMX0 589 aaKnown RBP15.82■□□□□ 0.12
MCF2L-210ENST00000409954 WDR27A2RRH5 827 aa15.81■□□□□ 0.12
MCF2L-210ENST00000409954 OGTO15294 1046 aa15.81■□□□□ 0.12
MCF2L-210ENST00000409954 KRT18P05783 430 aaKnown RBP15.81■□□□□ 0.12
MCF2L-210ENST00000409954 ADRB2P07550 413 aa15.81■□□□□ 0.12
MCF2L-210ENST00000409954 RHOP08100 348 aa15.81■□□□□ 0.12
MCF2L-210ENST00000409954 MCM4P33991 863 aa15.81■□□□□ 0.12
MCF2L-210ENST00000409954 ARPP19P56211 112 aa15.81■□□□□ 0.12
MCF2L-210ENST00000409954 CUL4AQ13619 759 aa15.81■□□□□ 0.12
MCF2L-210ENST00000409954 DHX8Q14562 1220 aaKnown RBP15.81■□□□□ 0.12
MCF2L-210ENST00000409954 SEZ6Q53EL9 994 aa15.81■□□□□ 0.12
MCF2L-210ENST00000409954 ZNF280DQ6N043 979 aa15.81■□□□□ 0.12
MCF2L-210ENST00000409954 ELMOD1Q8N336 334 aa15.81■□□□□ 0.12
MCF2L-210ENST00000409954 RASSF8Q8NHQ8 419 aa15.81■□□□□ 0.12
MCF2L-210ENST00000409954 RAD54LQ92698 747 aa15.81■□□□□ 0.12
MCF2L-210ENST00000409954 DDX12PQ92771 950 aa15.81■□□□□ 0.12
MCF2L-210ENST00000409954 REEP2Q9BRK0 252 aa15.81■□□□□ 0.12
MCF2L-210ENST00000409954 RPP25Q9BUL9 199 aaKnown RBP15.81■□□□□ 0.12
MCF2L-210ENST00000409954 RPF1Q9H9Y2 349 aaKnown RBP15.81■□□□□ 0.12
MCF2L-210ENST00000409954 TBC1D17Q9HA65 648 aa15.81■□□□□ 0.12
MCF2L-210ENST00000409954 CYP4F11Q9HBI6 524 aa15.81■□□□□ 0.12
MCF2L-210ENST00000409954 ARHGEF3Q9NR81 526 aa15.81■□□□□ 0.12
MCF2L-210ENST00000409954 BLOC1S4Q9NUP1 217 aa15.81■□□□□ 0.12
MCF2L-210ENST00000409954 AFF4Q9UHB7 1163 aaKnown RBP15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms