RNA–Protein interactions for RNA: ENST00000409854.5

EPHA4-202, Transcript of EPH receptor A4, humanhuman

TSL 1 (best) BASIC

Gene EPHA4, Length 3,454 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-202ENST00000409854 SCN1AP35498 2009 aa5.94□□□□□ -1.46
EPHA4-202ENST00000409854 INHAP05111 366 aa5.94□□□□□ -1.46
EPHA4-202ENST00000409854 ACO1P21399 889 aaKnown RBP5.94□□□□□ -1.46
EPHA4-202ENST00000409854 FGFR4P22455 802 aa5.94□□□□□ -1.46
EPHA4-202ENST00000409854 MRPS6P82932 125 aaKnown RBP5.94□□□□□ -1.46
EPHA4-202ENST00000409854 HTRA3P83110 453 aa5.94□□□□□ -1.46
EPHA4-202ENST00000409854 BIRC3Q13489 604 aa5.94□□□□□ -1.46
EPHA4-202ENST00000409854 NCOA4Q13772 614 aa5.94□□□□□ -1.46
EPHA4-202ENST00000409854 WDR44Q5JSH3 913 aa5.94□□□□□ -1.46
EPHA4-202ENST00000409854 LHX8Q68G74 356 aa5.94□□□□□ -1.46
EPHA4-202ENST00000409854 VPS36Q86VN1 386 aa5.94□□□□□ -1.46
EPHA4-202ENST00000409854 EPS8L1Q8TE68 723 aa5.94□□□□□ -1.46
EPHA4-202ENST00000409854 PI4K2AQ9BTU6 479 aa5.94□□□□□ -1.46
EPHA4-202ENST00000409854 CELF4Q9BZC1 486 aaKnown RBP5.94□□□□□ -1.46
EPHA4-202ENST00000409854 PLEKHA5Q9HAU0 1116 aa5.94□□□□□ -1.46
EPHA4-202ENST00000409854 LUC7LQ9NQ29 371 aaKnown RBP5.94□□□□□ -1.46
EPHA4-202ENST00000409854 TFR2Q9UP52 801 aa5.94□□□□□ -1.46
EPHA4-202ENST00000409854 DERAQ9Y315 318 aa5.94□□□□□ -1.46
EPHA4-202ENST00000409854 R3HCC1Q9Y3T6 440 aaKnown RBP5.94□□□□□ -1.46
EPHA4-202ENST00000409854 C2CD2Q9Y426 696 aa5.94□□□□□ -1.46
EPHA4-202ENST00000409854 TRPV2Q9Y5S1 764 aa5.94□□□□□ -1.46
EPHA4-202ENST00000409854 MOXD2PA6NHM9 499 aa5.93□□□□□ -1.46
EPHA4-202ENST00000409854 LACTBL1A8MY62 500 aa5.93□□□□□ -1.46
EPHA4-202ENST00000409854 STAU1O95793 577 aaKnown RBP5.93□□□□□ -1.46
EPHA4-202ENST00000409854 TBXAS1P24557 533 aaPredicted RBP5.93□□□□□ -1.46
EPHA4-202ENST00000409854 GTF2F1P35269 517 aaKnown RBP eCLIP5.93□□□□□ -1.46
EPHA4-202ENST00000409854 CHMP4BP1P59074 171 aa5.93□□□□□ -1.46
EPHA4-202ENST00000409854 NOP14P78316 857 aaKnown RBP5.93□□□□□ -1.46
EPHA4-202ENST00000409854 KIF5AQ12840 1032 aa5.93□□□□□ -1.46
EPHA4-202ENST00000409854 CUL2Q13617 745 aa5.93□□□□□ -1.46
EPHA4-202ENST00000409854 UBXN11Q5T124 520 aa5.93□□□□□ -1.46
EPHA4-202ENST00000409854 SCARA3Q6AZY7 606 aa5.93□□□□□ -1.46
EPHA4-202ENST00000409854 CATSPER4Q7RTX7 472 aa5.93□□□□□ -1.46
EPHA4-202ENST00000409854 RNF180Q86T96 592 aa5.93□□□□□ -1.46
EPHA4-202ENST00000409854 SLC35F6Q8N357 371 aa5.93□□□□□ -1.46
EPHA4-202ENST00000409854 RNF10Q8N5U6 811 aaKnown RBP5.93□□□□□ -1.46
EPHA4-202ENST00000409854 DDX1Q92499 740 aaKnown RBP5.93□□□□□ -1.46
EPHA4-202ENST00000409854 TAF4BQ92750 862 aa5.93□□□□□ -1.46
EPHA4-202ENST00000409854 WNT8BQ93098 351 aa5.93□□□□□ -1.46
EPHA4-202ENST00000409854 ANKRD36BP1Q96IX9 119 aa5.93□□□□□ -1.46
EPHA4-202ENST00000409854 AGPAT1Q99943 283 aa5.93□□□□□ -1.46
EPHA4-202ENST00000409854 SENP6Q9GZR1 1112 aaPredicted RBP5.93□□□□□ -1.46
EPHA4-202ENST00000409854 XYLT2Q9H1B5 865 aa5.93□□□□□ -1.46
EPHA4-202ENST00000409854 VRTNQ9H8Y1 702 aa5.93□□□□□ -1.46
EPHA4-202ENST00000409854 NUB1Q9Y5A7 615 aa5.93□□□□□ -1.46
EPHA4-202ENST00000409854 TSC2P49815 1807 aa5.93□□□□□ -1.46
EPHA4-202ENST00000409854 TTC36A6NLP5 189 aa5.93□□□□□ -1.46
EPHA4-202ENST00000409854 RIOK3O14730 519 aaKnown RBP5.93□□□□□ -1.46
EPHA4-202ENST00000409854 NPTXRO95502 500 aa5.93□□□□□ -1.46
EPHA4-202ENST00000409854 CST3P01034 146 aaPredicted RBP5.93□□□□□ -1.46
EPHA4-202ENST00000409854 TNNC2P02585 160 aa5.93□□□□□ -1.46
EPHA4-202ENST00000409854 NFICP08651 508 aa5.93□□□□□ -1.46
EPHA4-202ENST00000409854 CHRNB2P17787 502 aa5.93□□□□□ -1.46
EPHA4-202ENST00000409854 CASQ1P31415 396 aa5.93□□□□□ -1.46
EPHA4-202ENST00000409854 ZNF132P52740 706 aa5.93□□□□□ -1.46
EPHA4-202ENST00000409854 ACLYP53396 1101 aa5.93□□□□□ -1.46
EPHA4-202ENST00000409854 OSTNP61366 133 aa5.93□□□□□ -1.46
EPHA4-202ENST00000409854 NCBP1Q09161 790 aaKnown RBP5.93□□□□□ -1.46
EPHA4-202ENST00000409854 SGSM1Q2NKQ1 1148 aa5.93□□□□□ -1.46
EPHA4-202ENST00000409854 XKR4Q5GH76 650 aa5.93□□□□□ -1.46
EPHA4-202ENST00000409854 ZNF569Q5MCW4 686 aa5.93□□□□□ -1.46
EPHA4-202ENST00000409854 JADE1Q6IE81 842 aa5.93□□□□□ -1.46
EPHA4-202ENST00000409854 SPOPLQ6IQ16 392 aa5.93□□□□□ -1.46
EPHA4-202ENST00000409854 ALKBH5Q6P6C2 394 aaKnown RBP5.93□□□□□ -1.46
EPHA4-202ENST00000409854 ALKAL1Q6UXT8 129 aa5.93□□□□□ -1.46
EPHA4-202ENST00000409854 NOP9Q86U38 636 aaKnown RBP5.93□□□□□ -1.46
EPHA4-202ENST00000409854 GPATCH11Q8N954 259 aa5.93□□□□□ -1.46
EPHA4-202ENST00000409854 SLC43A3Q8NBI5 491 aa5.93□□□□□ -1.46
EPHA4-202ENST00000409854 MYRIPQ8NFW9 859 aa5.93□□□□□ -1.46
EPHA4-202ENST00000409854 SNX27Q96L92 541 aa5.93□□□□□ -1.46
EPHA4-202ENST00000409854 ACAP3Q96P50 834 aa5.93□□□□□ -1.46
EPHA4-202ENST00000409854 TSPAN18Q96SJ8 248 aa5.93□□□□□ -1.46
EPHA4-202ENST00000409854 SIX4Q9UIU6 781 aa5.93□□□□□ -1.46
EPHA4-202ENST00000409854 GUCA1BQ9UMX6 200 aa5.93□□□□□ -1.46
EPHA4-202ENST00000409854 DUSP10Q9Y6W6 482 aa5.93□□□□□ -1.46
EPHA4-202ENST00000409854 NCANO14594 1321 aa5.93□□□□□ -1.46
EPHA4-202ENST00000409854 UMODL1Q5DID0 1318 aa5.93□□□□□ -1.46
EPHA4-202ENST00000409854 A0A0A6YYK5 440 aaPredicted RBP5.93□□□□□ -1.46
EPHA4-202ENST00000409854 SGPL1O95470 568 aa5.93□□□□□ -1.46
EPHA4-202ENST00000409854 TMEM191BP0C7N4 346 aa5.93□□□□□ -1.46
EPHA4-202ENST00000409854 CYP11B1P15538 503 aa5.93□□□□□ -1.46
EPHA4-202ENST00000409854 GRK4P32298 578 aa5.93□□□□□ -1.46
EPHA4-202ENST00000409854 TCEAL1Q15170 157 aa5.93□□□□□ -1.46
EPHA4-202ENST00000409854 TRIM71Q2Q1W2 868 aaKnown RBP5.93□□□□□ -1.46
EPHA4-202ENST00000409854 FAM26DQ5JW98 314 aa5.93□□□□□ -1.46
EPHA4-202ENST00000409854 RSPH3Q86UC2 560 aa5.93□□□□□ -1.46
EPHA4-202ENST00000409854 FAM228AQ86W67 206 aa5.93□□□□□ -1.46
EPHA4-202ENST00000409854 GLYCTKQ8IVS8 523 aa5.93□□□□□ -1.46
EPHA4-202ENST00000409854 C1orf127Q8N9H9 656 aa5.93□□□□□ -1.46
EPHA4-202ENST00000409854 SLC20A1Q8WUM9 679 aa5.93□□□□□ -1.46
EPHA4-202ENST00000409854 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP5.93□□□□□ -1.46
EPHA4-202ENST00000409854 EIF2AQ9BY44 585 aaKnown RBP5.93□□□□□ -1.46
EPHA4-202ENST00000409854 CNTN3Q9P232 1028 aa5.93□□□□□ -1.46
EPHA4-202ENST00000409854 SALL4Q9UJQ4 1053 aa5.93□□□□□ -1.46
EPHA4-202ENST00000409854 CDY2AQ9Y6F7 541 aa5.93□□□□□ -1.46
EPHA4-202ENST00000409854 HTTP42858 3142 aa5.92□□□□□ -1.46
EPHA4-202ENST00000409854 ANO9A1A5B4 782 aa5.92□□□□□ -1.46
EPHA4-202ENST00000409854 CYP26A1O43174 497 aa5.92□□□□□ -1.46
EPHA4-202ENST00000409854 CAND2O75155 1236 aa5.92□□□□□ -1.46
EPHA4-202ENST00000409854 PHACTR2O75167 634 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms