RNA–Protein interactions for RNA: ENST00000409542.5

CHRNA1-205, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3 BASIC

Gene CHRNA1, Length 1,460 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-205ENST00000409542 ZNF75DP51815 510 aa13.96□□□□□ -0.17
CHRNA1-205ENST00000409542 PLCB2Q00722 1185 aa13.96□□□□□ -0.17
CHRNA1-205ENST00000409542 POU5F1BQ06416 359 aa13.96□□□□□ -0.17
CHRNA1-205ENST00000409542 NCBP1Q09161 790 aaKnown RBP13.96□□□□□ -0.17
CHRNA1-205ENST00000409542 FZD5Q13467 585 aa13.96□□□□□ -0.17
CHRNA1-205ENST00000409542 TRIM29Q14134 588 aa13.96□□□□□ -0.17
CHRNA1-205ENST00000409542 TFDP1Q14186 410 aa13.96□□□□□ -0.17
CHRNA1-205ENST00000409542 SLC39A14Q15043 492 aa13.96□□□□□ -0.17
CHRNA1-205ENST00000409542 IQCB1Q15051 598 aa13.96□□□□□ -0.17
CHRNA1-205ENST00000409542 PCBP1Q15365 356 aaKnown RBP eCLIP13.96□□□□□ -0.17
CHRNA1-205ENST00000409542 NAB2Q15742 525 aa13.96□□□□□ -0.17
CHRNA1-205ENST00000409542 PSMD5Q16401 504 aa13.96□□□□□ -0.17
CHRNA1-205ENST00000409542 PPM1LQ5SGD2 360 aa13.96□□□□□ -0.17
CHRNA1-205ENST00000409542 FAM171A1Q5VUB5 890 aa13.96□□□□□ -0.17
CHRNA1-205ENST00000409542 SLC27A1Q6PCB7 646 aa13.96□□□□□ -0.17
CHRNA1-205ENST00000409542 TSSK4Q6SA08 328 aa13.96□□□□□ -0.17
CHRNA1-205ENST00000409542 RSPO2Q6UXX9 243 aaPredicted RBP13.96□□□□□ -0.17
CHRNA1-205ENST00000409542 PIK3R5Q8WYR1 880 aa13.96□□□□□ -0.17
CHRNA1-205ENST00000409542 TTPALQ9BTX7 342 aa13.96□□□□□ -0.17
CHRNA1-205ENST00000409542 BCO2Q9BYV7 579 aa13.96□□□□□ -0.17
CHRNA1-205ENST00000409542 LTB4R2Q9NPC1 389 aa13.96□□□□□ -0.17
CHRNA1-205ENST00000409542 GPRC5CQ9NQ84 441 aa13.96□□□□□ -0.17
CHRNA1-205ENST00000409542 SPTLC3Q9NUV7 552 aa13.96□□□□□ -0.17
CHRNA1-205ENST00000409542 SPTBN2O15020 2390 aa13.95□□□□□ -0.18
CHRNA1-205ENST00000409542 PPP6R2O75170 966 aa13.95□□□□□ -0.18
CHRNA1-205ENST00000409542 HNRNPA1P09651 372 aaKnown RBP eCLIP13.95□□□□□ -0.18
CHRNA1-205ENST00000409542 GCFC2P16383 781 aaKnown RBP13.95□□□□□ -0.18
CHRNA1-205ENST00000409542 CMA1P23946 247 aa13.95□□□□□ -0.18
CHRNA1-205ENST00000409542 TARSP26639 723 aaKnown RBP13.95□□□□□ -0.18
CHRNA1-205ENST00000409542 ATXN1P54253 815 aaKnown RBP13.95□□□□□ -0.18
CHRNA1-205ENST00000409542 PRKCQQ04759 706 aa13.95□□□□□ -0.18
CHRNA1-205ENST00000409542 TUSC3Q13454 348 aa13.95□□□□□ -0.18
CHRNA1-205ENST00000409542 ZNF528Q3MIS6 628 aa13.95□□□□□ -0.18
CHRNA1-205ENST00000409542 ING5Q8WYH8 240 aa13.95□□□□□ -0.18
CHRNA1-205ENST00000409542 HSD17B14Q9BPX1 270 aa13.95□□□□□ -0.18
CHRNA1-205ENST00000409542 POLR3FQ9H1D9 316 aaPredicted RBP13.95□□□□□ -0.18
CHRNA1-205ENST00000409542 SNTG2Q9NY99 539 aa13.95□□□□□ -0.18
CHRNA1-205ENST00000409542 FBXO4Q9UKT5 387 aa13.95□□□□□ -0.18
CHRNA1-205ENST00000409542 SF3B1O75533 1304 aaKnown RBP eCLIP13.95□□□□□ -0.18
CHRNA1-205ENST00000409542 CACNA1BQ00975 2339 aa13.95□□□□□ -0.18
CHRNA1-205ENST00000409542 FAM237AA0A1B0GTK4 181 aa13.94□□□□□ -0.18
CHRNA1-205ENST00000409542 WNT7AO00755 349 aa13.94□□□□□ -0.18
CHRNA1-205ENST00000409542 NRG2O14511 850 aaPredicted RBP13.94□□□□□ -0.18
CHRNA1-205ENST00000409542 MARCH6O60337 910 aa13.94□□□□□ -0.18
CHRNA1-205ENST00000409542 EDN1P05305 212 aa13.94□□□□□ -0.18
CHRNA1-205ENST00000409542 TGM1P22735 817 aa13.94□□□□□ -0.18
CHRNA1-205ENST00000409542 RARRES1P49788 294 aa13.94□□□□□ -0.18
CHRNA1-205ENST00000409542 CREMQ03060 361 aa13.94□□□□□ -0.18
CHRNA1-205ENST00000409542 AXDND1Q5T1B0 1012 aaPredicted RBP13.94□□□□□ -0.18
CHRNA1-205ENST00000409542 LIN9Q5TKA1 542 aa13.94□□□□□ -0.18
CHRNA1-205ENST00000409542 MAEAQ7L5Y9 396 aa13.94□□□□□ -0.18
CHRNA1-205ENST00000409542 NPAS3Q8IXF0 933 aa13.94□□□□□ -0.18
CHRNA1-205ENST00000409542 HACE1Q8IYU2 909 aa13.94□□□□□ -0.18
CHRNA1-205ENST00000409542 ZBTB44Q8NCP5 570 aa13.94□□□□□ -0.18
CHRNA1-205ENST00000409542 SLC7A14Q8TBB6 771 aa13.94□□□□□ -0.18
CHRNA1-205ENST00000409542 PIGOQ8TEQ8 1089 aa13.94□□□□□ -0.18
CHRNA1-205ENST00000409542 NFKBIZQ9BYH8 718 aa13.94□□□□□ -0.18
CHRNA1-205ENST00000409542 TTC12Q9H892 705 aaPredicted RBP13.94□□□□□ -0.18
CHRNA1-205ENST00000409542 NCDNQ9UBB6 729 aa13.94□□□□□ -0.18
CHRNA1-205ENST00000409542 KMT2BQ9UMN6 2715 aaPredicted RBP13.94□□□□□ -0.18
CHRNA1-205ENST00000409542 GOLGA6L19H0YKK7 550 aa13.93□□□□□ -0.18
CHRNA1-205ENST00000409542 LILRB5O75023 590 aa13.93□□□□□ -0.18
CHRNA1-205ENST00000409542 DGAT1O75907 488 aa13.93□□□□□ -0.18
CHRNA1-205ENST00000409542 LYPLA2O95372 231 aa13.93□□□□□ -0.18
CHRNA1-205ENST00000409542 HOXA9P31269 272 aa13.93□□□□□ -0.18
CHRNA1-205ENST00000409542 NDUFA8P51970 172 aa13.93□□□□□ -0.18
CHRNA1-205ENST00000409542 NR5A1Q13285 461 aa13.93□□□□□ -0.18
CHRNA1-205ENST00000409542 SLC5A9Q2M3M2 681 aa13.93□□□□□ -0.18
CHRNA1-205ENST00000409542 CD300LGQ6UXG3 332 aa13.93□□□□□ -0.18
CHRNA1-205ENST00000409542 C11orf57Q6ZUT1 292 aaPredicted RBP13.93□□□□□ -0.18
CHRNA1-205ENST00000409542 MTSS1LQ765P7 747 aa13.93□□□□□ -0.18
CHRNA1-205ENST00000409542 CEP57L1Q8IYX8 460 aa13.93□□□□□ -0.18
CHRNA1-205ENST00000409542 FAM177A1Q8N128 213 aaPredicted RBP13.93□□□□□ -0.18
CHRNA1-205ENST00000409542 NELL1Q92832 810 aa13.93□□□□□ -0.18
CHRNA1-205ENST00000409542 MCRS1Q96EZ8 462 aa13.93□□□□□ -0.18
CHRNA1-205ENST00000409542 TIGD1Q96MW7 591 aa13.93□□□□□ -0.18
CHRNA1-205ENST00000409542 OSBPL6Q9BZF3 934 aa13.93□□□□□ -0.18
CHRNA1-205ENST00000409542 NAT10Q9H0A0 1025 aaKnown RBP13.93□□□□□ -0.18
CHRNA1-205ENST00000409542 PDZD7Q9H5P4 517 aa13.93□□□□□ -0.18
CHRNA1-205ENST00000409542 ANKEF1Q9NU02 776 aa13.93□□□□□ -0.18
CHRNA1-205ENST00000409542 EPG5Q9HCE0 2579 aa13.93□□□□□ -0.18
CHRNA1-205ENST00000409542 TPRP12270 2363 aaKnown RBP13.93□□□□□ -0.18
CHRNA1-205ENST00000409542 A0A1B0GVL5 298 aa13.93□□□□□ -0.18
CHRNA1-205ENST00000409542 SPTLC1O15269 473 aa13.93□□□□□ -0.18
CHRNA1-205ENST00000409542 USO1O60763 962 aaKnown RBP13.93□□□□□ -0.18
CHRNA1-205ENST00000409542 OR1D2P34982 312 aa13.93□□□□□ -0.18
CHRNA1-205ENST00000409542 RAB33AQ14088 237 aa13.93□□□□□ -0.18
CHRNA1-205ENST00000409542 NOLC1Q14978 699 aaKnown RBP eCLIP13.93□□□□□ -0.18
CHRNA1-205ENST00000409542 PTPAQ15257 358 aa13.93□□□□□ -0.18
CHRNA1-205ENST00000409542 TPRG1Q6ZUI0 275 aa13.93□□□□□ -0.18
CHRNA1-205ENST00000409542 NOSTRINQ8IVI9 506 aa13.93□□□□□ -0.18
CHRNA1-205ENST00000409542 CLDN23Q96B33 292 aa13.93□□□□□ -0.18
CHRNA1-205ENST00000409542 ZNF830Q96NB3 372 aaPredicted RBP13.93□□□□□ -0.18
CHRNA1-205ENST00000409542 BPIFA3Q9BQP9 254 aa13.93□□□□□ -0.18
CHRNA1-205ENST00000409542 TRIM5Q9C035 493 aa13.93□□□□□ -0.18
CHRNA1-205ENST00000409542 KCNF1Q9H3M0 494 aa13.93□□□□□ -0.18
CHRNA1-205ENST00000409542 FZD8Q9H461 694 aa13.93□□□□□ -0.18
CHRNA1-205ENST00000409542 PARD6AQ9NPB6 346 aa13.93□□□□□ -0.18
CHRNA1-205ENST00000409542 HEBP1Q9NRV9 189 aa13.93□□□□□ -0.18
CHRNA1-205ENST00000409542 ZSCAN32Q9NX65 697 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms