RNA–Protein interactions for RNA: ENST00000407144.6

CUEDC1-202, Transcript of CUE domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CUEDC1, Length 2,190 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-202ENST00000407144 VILLO15195 856 aa23.68■■□□□ 1.38
CUEDC1-202ENST00000407144 BUD23O43709 281 aaKnown RBP23.68■■□□□ 1.38
CUEDC1-202ENST00000407144 SPAG7O75391 227 aa23.68■■□□□ 1.38
CUEDC1-202ENST00000407144 ESRRAP11474 423 aaPredicted RBP23.68■■□□□ 1.38
CUEDC1-202ENST00000407144 KCNJ1P48048 391 aa23.68■■□□□ 1.38
CUEDC1-202ENST00000407144 PTK6Q13882 451 aa23.68■■□□□ 1.38
CUEDC1-202ENST00000407144 KBTBD12Q3ZCT8 623 aa23.68■■□□□ 1.38
CUEDC1-202ENST00000407144 CCDC62Q6P9F0 684 aa23.68■■□□□ 1.38
CUEDC1-202ENST00000407144 GAB3Q8WWW8 586 aa23.68■■□□□ 1.38
CUEDC1-202ENST00000407144 C6orf50Q9HD87 102 aa23.68■■□□□ 1.38
CUEDC1-202ENST00000407144 ONECUT3O60422 494 aaPredicted RBP23.68■■□□□ 1.38
CUEDC1-202ENST00000407144 FKBP6O75344 327 aa23.68■■□□□ 1.38
CUEDC1-202ENST00000407144 UQCRBP14927 111 aa23.68■■□□□ 1.38
CUEDC1-202ENST00000407144 VARSP26640 1264 aaKnown RBP23.68■■□□□ 1.38
CUEDC1-202ENST00000407144 GTF2H1P32780 548 aa23.68■■□□□ 1.38
CUEDC1-202ENST00000407144 MAN1A1P33908 653 aa23.68■■□□□ 1.38
CUEDC1-202ENST00000407144 CLCN2P51788 898 aa23.68■■□□□ 1.38
CUEDC1-202ENST00000407144 OXCT1P55809 520 aa23.68■■□□□ 1.38
CUEDC1-202ENST00000407144 DGKHQ86XP1 1220 aa23.68■■□□□ 1.38
CUEDC1-202ENST00000407144 SEPT12Q8IYM1 358 aa23.68■■□□□ 1.38
CUEDC1-202ENST00000407144 OR6Y1Q8NGX8 325 aa23.68■■□□□ 1.38
CUEDC1-202ENST00000407144 SKA1Q96BD8 255 aa23.68■■□□□ 1.38
CUEDC1-202ENST00000407144 PRICKLE1Q96MT3 831 aaPredicted RBP23.68■■□□□ 1.38
CUEDC1-202ENST00000407144 CORO1BQ9BR76 489 aa23.68■■□□□ 1.38
CUEDC1-202ENST00000407144 STK33Q9BYT3 514 aa23.68■■□□□ 1.38
CUEDC1-202ENST00000407144 BRD8Q9H0E9 1235 aa23.68■■□□□ 1.38
CUEDC1-202ENST00000407144 TRABDQ9H4I3 376 aa23.68■■□□□ 1.38
CUEDC1-202ENST00000407144 HEY2Q9UBP5 337 aa23.68■■□□□ 1.38
CUEDC1-202ENST00000407144 ASIC3Q9UHC3 531 aa23.68■■□□□ 1.38
CUEDC1-202ENST00000407144 MAD2L2Q9UI95 211 aa23.68■■□□□ 1.38
CUEDC1-202ENST00000407144 ROBO3Q96MS0 1386 aa23.67■■□□□ 1.38
CUEDC1-202ENST00000407144 KCPQ6ZWJ8 1503 aa23.67■■□□□ 1.38
CUEDC1-202ENST00000407144 SUPT3HO75486 399 aa23.67■■□□□ 1.38
CUEDC1-202ENST00000407144 PYGMP11217 842 aa23.67■■□□□ 1.38
CUEDC1-202ENST00000407144 ACTR3P61158 418 aa23.67■■□□□ 1.38
CUEDC1-202ENST00000407144 FAM47AQ5JRC9 791 aa23.67■■□□□ 1.38
CUEDC1-202ENST00000407144 RNF207Q6ZRF8 634 aa23.67■■□□□ 1.38
CUEDC1-202ENST00000407144 CCDC80Q76M96 950 aa23.67■■□□□ 1.38
CUEDC1-202ENST00000407144 CCDC110Q8TBZ0 833 aa23.67■■□□□ 1.38
CUEDC1-202ENST00000407144 ANKRD2Q9GZV1 360 aa23.67■■□□□ 1.38
CUEDC1-202ENST00000407144 RANBP17Q9H2T7 1088 aaKnown RBP23.67■■□□□ 1.38
CUEDC1-202ENST00000407144 DNAJC18Q9H819 358 aa23.67■■□□□ 1.38
CUEDC1-202ENST00000407144 UTP3Q9NQZ2 479 aaKnown RBP eCLIP23.67■■□□□ 1.38
CUEDC1-202ENST00000407144 MTO1Q9Y2Z2 717 aaKnown RBP23.67■■□□□ 1.38
CUEDC1-202ENST00000407144 IRS4O14654 1257 aaPredicted RBP23.67■■□□□ 1.38
CUEDC1-202ENST00000407144 RGL2O15211 777 aa23.67■■□□□ 1.38
CUEDC1-202ENST00000407144 ZNF862O60290 1169 aa23.67■■□□□ 1.38
CUEDC1-202ENST00000407144 MARCKSL1P49006 195 aa23.67■■□□□ 1.38
CUEDC1-202ENST00000407144 ITGA8P53708 1063 aa23.67■■□□□ 1.38
CUEDC1-202ENST00000407144 HSP90AA5PQ58FG0 334 aa23.67■■□□□ 1.38
CUEDC1-202ENST00000407144 AAGABQ6PD74 315 aa23.67■■□□□ 1.38
CUEDC1-202ENST00000407144 PASD1Q8IV76 773 aa23.67■■□□□ 1.38
CUEDC1-202ENST00000407144 ZBED8Q8IZ13 594 aa23.67■■□□□ 1.38
CUEDC1-202ENST00000407144 HELBQ8NG08 1087 aaPredicted RBP23.67■■□□□ 1.38
CUEDC1-202ENST00000407144 TBCKQ8TEA7 893 aa23.67■■□□□ 1.38
CUEDC1-202ENST00000407144 CD101Q93033 1021 aa23.67■■□□□ 1.38
CUEDC1-202ENST00000407144 SSU72Q9NP77 194 aaKnown RBP23.67■■□□□ 1.38
CUEDC1-202ENST00000407144 SPATA7Q9P0W8 599 aa23.67■■□□□ 1.38
CUEDC1-202ENST00000407144 GCNT4Q9P109 453 aa23.67■■□□□ 1.38
CUEDC1-202ENST00000407144 TCRBV7S2A1N4TA0A589 114 aa23.66■■□□□ 1.38
CUEDC1-202ENST00000407144 WDR46O15213 610 aaKnown RBP23.66■■□□□ 1.38
CUEDC1-202ENST00000407144 RPL5P46777 297 aaKnown RBP23.66■■□□□ 1.38
CUEDC1-202ENST00000407144 SLC35G1Q2M3R5 365 aa23.66■■□□□ 1.38
CUEDC1-202ENST00000407144 MAP3K21Q5TCX8 1036 aa23.66■■□□□ 1.38
CUEDC1-202ENST00000407144 LRRC6Q86X45 466 aa23.66■■□□□ 1.38
CUEDC1-202ENST00000407144 TMPRSS6Q8IU80 811 aa23.66■■□□□ 1.38
CUEDC1-202ENST00000407144 MPHOSPH6Q99547 160 aaKnown RBP23.66■■□□□ 1.38
CUEDC1-202ENST00000407144 LBHD1Q9BQE6 289 aaPredicted RBP23.66■■□□□ 1.38
CUEDC1-202ENST00000407144 FAIMQ9NVQ4 179 aa23.66■■□□□ 1.38
CUEDC1-202ENST00000407144 NPHP3-ACAD11A0A0J9YXS1 232 aa23.65■■□□□ 1.38
CUEDC1-202ENST00000407144 USP17L12C9JPN9 530 aa23.65■■□□□ 1.38
CUEDC1-202ENST00000407144 USP17L21D6R901 530 aa23.65■■□□□ 1.38
CUEDC1-202ENST00000407144 CYTH3O43739 400 aa23.65■■□□□ 1.38
CUEDC1-202ENST00000407144 CIB2O75838 187 aa23.65■■□□□ 1.38
CUEDC1-202ENST00000407144 CDK16Q00536 496 aa23.65■■□□□ 1.38
CUEDC1-202ENST00000407144 NUP93Q8N1F7 819 aa23.65■■□□□ 1.38
CUEDC1-202ENST00000407144 SYNE4Q8N205 404 aa23.65■■□□□ 1.38
CUEDC1-202ENST00000407144 PNMA1Q8ND90 353 aa23.65■■□□□ 1.38
CUEDC1-202ENST00000407144 NUDT12Q9BQG2 462 aa23.65■■□□□ 1.38
CUEDC1-202ENST00000407144 C17orf75Q9HAS0 396 aa23.65■■□□□ 1.38
CUEDC1-202ENST00000407144 USP29Q9HBJ7 922 aa23.65■■□□□ 1.38
CUEDC1-202ENST00000407144 SUN2Q9UH99 717 aa23.65■■□□□ 1.38
CUEDC1-202ENST00000407144 ANAPC5Q9UJX4 755 aa23.65■■□□□ 1.38
CUEDC1-202ENST00000407144 NDC80O14777 642 aa23.65■■□□□ 1.38
CUEDC1-202ENST00000407144 SLC16A3O15427 465 aaKnown RBP23.65■■□□□ 1.38
CUEDC1-202ENST00000407144 OR6B1O95007 311 aa23.65■■□□□ 1.38
CUEDC1-202ENST00000407144 TNFAIP3P21580 790 aa23.65■■□□□ 1.38
CUEDC1-202ENST00000407144 RPA3P35244 121 aaPredicted RBP23.65■■□□□ 1.38
CUEDC1-202ENST00000407144 ARHGAP4P98171 946 aa23.65■■□□□ 1.38
CUEDC1-202ENST00000407144 SLC1A5Q15758 541 aa23.65■■□□□ 1.38
CUEDC1-202ENST00000407144 C1orf228Q6PIY5 440 aa23.65■■□□□ 1.38
CUEDC1-202ENST00000407144 KIF6Q6ZMV9 814 aa23.65■■□□□ 1.38
CUEDC1-202ENST00000407144 RASSF3Q86WH2 238 aa23.65■■□□□ 1.38
CUEDC1-202ENST00000407144 BBOF1Q8ND07 529 aa23.65■■□□□ 1.38
CUEDC1-202ENST00000407144 POP1Q99575 1024 aaKnown RBP23.65■■□□□ 1.38
CUEDC1-202ENST00000407144 TRIM55Q9BYV6 548 aa23.65■■□□□ 1.38
CUEDC1-202ENST00000407144 FOXP3Q9BZS1 431 aa23.65■■□□□ 1.38
CUEDC1-202ENST00000407144 TBC1D7Q9P0N9 293 aa23.65■■□□□ 1.38
CUEDC1-202ENST00000407144 KAT6BQ8WYB5 2073 aa23.65■■□□□ 1.38
CUEDC1-202ENST00000407144 TSPY2A6NKD2 308 aa23.64■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms