RNA–Protein interactions for RNA: ENST00000405547.7

SNED1-205, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SNED1, Length 7,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-205ENST00000405547 C16orf89Q6UX73 402 aa14.05□□□□□ -0.16
SNED1-205ENST00000405547 CELF4Q9BZC1 486 aaKnown RBP14.05□□□□□ -0.16
SNED1-205ENST00000405547 IL25Q9H293 177 aa14.05□□□□□ -0.16
SNED1-205ENST00000405547 RAB6BQ9NRW1 208 aa14.05□□□□□ -0.16
SNED1-205ENST00000405547 AFDNP55196 1824 aaKnown RBP14.05□□□□□ -0.16
SNED1-205ENST00000405547 IFNA8P32881 189 aa14.05□□□□□ -0.16
SNED1-205ENST00000405547 LRRC8EQ6NSJ5 796 aa14.05□□□□□ -0.16
SNED1-205ENST00000405547 LRRC8BQ6P9F7 803 aa14.05□□□□□ -0.16
SNED1-205ENST00000405547 ARL8AQ96BM9 186 aa14.05□□□□□ -0.16
SNED1-205ENST00000405547 NBPF3Q9H094 633 aa14.05□□□□□ -0.16
SNED1-205ENST00000405547 PKD2L2Q9NZM6 624 aa14.05□□□□□ -0.16
SNED1-205ENST00000405547 KIF17Q9P2E2 1029 aa14.05□□□□□ -0.16
SNED1-205ENST00000405547 NAGPAQ9UK23 515 aa14.05□□□□□ -0.16
SNED1-205ENST00000405547 COMTP21964 271 aa14.05□□□□□ -0.16
SNED1-205ENST00000405547 KCNA4P22459 653 aa14.05□□□□□ -0.16
SNED1-205ENST00000405547 ERVK-24P63145 666 aa14.05□□□□□ -0.16
SNED1-205ENST00000405547 INPP5AQ14642 412 aa14.05□□□□□ -0.16
SNED1-205ENST00000405547 PGBD4Q96DM1 585 aa14.05□□□□□ -0.16
SNED1-205ENST00000405547 C9orf72Q96LT7 481 aa14.05□□□□□ -0.16
SNED1-205ENST00000405547 SMARCAL1Q9NZC9 954 aa14.05□□□□□ -0.16
SNED1-205ENST00000405547 MYO5BQ9ULV0 1848 aa14.05□□□□□ -0.16
SNED1-205ENST00000405547 OVOS2A0A0G2JMS6 1433 aa14.05□□□□□ -0.16
SNED1-205ENST00000405547 PRAMEP78395 509 aa14.05□□□□□ -0.16
SNED1-205ENST00000405547 Q3C1V9 767 aa14.05□□□□□ -0.16
SNED1-205ENST00000405547 JPH1Q9HDC5 661 aaPredicted RBP14.05□□□□□ -0.16
SNED1-205ENST00000405547 CASZ1Q86V15 1759 aa14.04□□□□□ -0.16
SNED1-205ENST00000405547 SLC9A1P19634 815 aa14.04□□□□□ -0.16
SNED1-205ENST00000405547 RPA1P27694 616 aa14.04□□□□□ -0.16
SNED1-205ENST00000405547 KCNQ4P56696 695 aa14.04□□□□□ -0.16
SNED1-205ENST00000405547 NSL1Q96IY1 281 aa14.04□□□□□ -0.16
SNED1-205ENST00000405547 FRMD8Q9BZ67 464 aaPredicted RBP14.04□□□□□ -0.16
SNED1-205ENST00000405547 ALG13Q9NP73 1137 aaKnown RBP14.04□□□□□ -0.16
SNED1-205ENST00000405547 KLHDC7AQ5VTJ3 777 aa14.04□□□□□ -0.16
SNED1-205ENST00000405547 ACAP3Q96P50 834 aa14.04□□□□□ -0.16
SNED1-205ENST00000405547 CCDC90BQ9GZT6 254 aa14.04□□□□□ -0.16
SNED1-205ENST00000405547 VCPKMTQ9H867 229 aa14.04□□□□□ -0.16
SNED1-205ENST00000405547 OLA1Q9NTK5 396 aaKnown RBP14.04□□□□□ -0.16
SNED1-205ENST00000405547 TNS3Q68CZ2 1445 aa14.04□□□□□ -0.16
SNED1-205ENST00000405547 DGAT1O75907 488 aa14.04□□□□□ -0.16
SNED1-205ENST00000405547 PDHBP11177 359 aa14.04□□□□□ -0.16
SNED1-205ENST00000405547 TMEM8AQ9HCN3 771 aa14.04□□□□□ -0.16
SNED1-205ENST00000405547 GNAT1P11488 350 aa14.04□□□□□ -0.16
SNED1-205ENST00000405547 BAG6P46379 1132 aa14.04□□□□□ -0.16
SNED1-205ENST00000405547 ABCE1P61221 599 aaKnown RBP14.04□□□□□ -0.16
SNED1-205ENST00000405547 UGP2Q16851 508 aa14.04□□□□□ -0.16
SNED1-205ENST00000405547 TTC39BQ5VTQ0 682 aaPredicted RBP14.04□□□□□ -0.16
SNED1-205ENST00000405547 PRUNE1Q86TP1 453 aa14.04□□□□□ -0.16
SNED1-205ENST00000405547 THAP11Q96EK4 314 aa14.04□□□□□ -0.16
SNED1-205ENST00000405547 CDY2AQ9Y6F7 541 aa14.04□□□□□ -0.16
SNED1-205ENST00000405547 CDY1Q9Y6F8 540 aa14.04□□□□□ -0.16
SNED1-205ENST00000405547 PREX1Q8TCU6 1659 aa14.04□□□□□ -0.16
SNED1-205ENST00000405547 VHLP40337 213 aa14.04□□□□□ -0.16
SNED1-205ENST00000405547 IREB2P48200 963 aaKnown RBP14.04□□□□□ -0.16
SNED1-205ENST00000405547 SNRNP48Q6IEG0 339 aaKnown RBP14.04□□□□□ -0.16
SNED1-205ENST00000405547 SETD3Q86TU7 594 aaPredicted RBP14.04□□□□□ -0.16
SNED1-205ENST00000405547 DDX42Q86XP3 938 aaKnown RBP eCLIP14.04□□□□□ -0.16
SNED1-205ENST00000405547 CPA5Q8WXQ8 436 aa14.04□□□□□ -0.16
SNED1-205ENST00000405547 EIF4E1BA6NMX2 242 aaKnown RBP14.03□□□□□ -0.16
SNED1-205ENST00000405547 ACADSP16219 412 aa14.03□□□□□ -0.16
SNED1-205ENST00000405547 RANBP1P43487 201 aa14.03□□□□□ -0.16
SNED1-205ENST00000405547 MAP3K10Q02779 954 aa14.03□□□□□ -0.16
SNED1-205ENST00000405547 KYNUQ16719 465 aa14.03□□□□□ -0.16
SNED1-205ENST00000405547 KIAA1841Q6NSI8 718 aa14.03□□□□□ -0.16
SNED1-205ENST00000405547 LVRNQ6Q4G3 990 aa14.03□□□□□ -0.16
SNED1-205ENST00000405547 C16orf86Q6ZW13 317 aa14.03□□□□□ -0.16
SNED1-205ENST00000405547 C4orf33Q8N1A6 199 aa14.03□□□□□ -0.16
SNED1-205ENST00000405547 SPATA18Q8TC71 538 aa14.03□□□□□ -0.16
SNED1-205ENST00000405547 RAVER2Q9HCJ3 691 aaKnown RBP14.03□□□□□ -0.16
SNED1-205ENST00000405547 SNRPAP09012 282 aaKnown RBP14.03□□□□□ -0.16
SNED1-205ENST00000405547 AKR1B1P15121 316 aa14.03□□□□□ -0.16
SNED1-205ENST00000405547 ANGPTL8Q6UXH0 198 aa14.03□□□□□ -0.16
SNED1-205ENST00000405547 C4orf22Q6V702 233 aa14.03□□□□□ -0.16
SNED1-205ENST00000405547 ACTRT1Q8TDG2 376 aa14.03□□□□□ -0.16
SNED1-205ENST00000405547 CAVIN3Q969G5 261 aa14.03□□□□□ -0.16
SNED1-205ENST00000405547 EME1Q96AY2 570 aa14.03□□□□□ -0.16
SNED1-205ENST00000405547 TMEM117Q9H0C3 514 aa14.03□□□□□ -0.16
SNED1-205ENST00000405547 SLIT1O75093 1534 aa14.03□□□□□ -0.16
SNED1-205ENST00000405547 H0Y626 953 aa14.03□□□□□ -0.16
SNED1-205ENST00000405547 TRIM16O95361 564 aa14.03□□□□□ -0.16
SNED1-205ENST00000405547 PTK7Q13308 1070 aa14.03□□□□□ -0.16
SNED1-205ENST00000405547 TDRD3Q9H7E2 651 aaKnown RBP14.03□□□□□ -0.16
SNED1-205ENST00000405547 RNF146Q9NTX7 359 aa14.03□□□□□ -0.16
SNED1-205ENST00000405547 WHRNQ9P202 907 aa14.03□□□□□ -0.16
SNED1-205ENST00000405547 TMCC1O94876 653 aa14.03□□□□□ -0.16
SNED1-205ENST00000405547 SCTRP47872 440 aa14.03□□□□□ -0.16
SNED1-205ENST00000405547 SLC10A5Q5PT55 438 aa14.03□□□□□ -0.16
SNED1-205ENST00000405547 CASKIN2Q8WXE0 1202 aa14.03□□□□□ -0.16
SNED1-205ENST00000405547 TEX12Q9BXU0 123 aa14.03□□□□□ -0.16
SNED1-205ENST00000405547 CCDC134Q9H6E4 229 aa14.03□□□□□ -0.16
SNED1-205ENST00000405547 MANSC1Q9H8J5 431 aa14.03□□□□□ -0.16
SNED1-205ENST00000405547 PAK5Q9P286 719 aa14.03□□□□□ -0.16
SNED1-205ENST00000405547 FLT1P17948 1338 aa14.03□□□□□ -0.16
SNED1-205ENST00000405547 ENO4A6NNW6 628 aa14.03□□□□□ -0.16
SNED1-205ENST00000405547 KRT16P08779 473 aa14.03□□□□□ -0.16
SNED1-205ENST00000405547 COILP38432 576 aaPredicted RBP14.03□□□□□ -0.16
SNED1-205ENST00000405547 ITGA8P53708 1063 aa14.03□□□□□ -0.16
SNED1-205ENST00000405547 GRIN1Q05586 938 aa14.03□□□□□ -0.16
SNED1-205ENST00000405547 SPDYE1Q8NFV5 336 aaPredicted RBP14.03□□□□□ -0.16
SNED1-205ENST00000405547 ULK4Q96C45 1275 aa14.03□□□□□ -0.16
SNED1-205ENST00000405547 FAM217BQ9NTX9 383 aaPredicted RBP14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms