RNA–Protein interactions for RNA: ENST00000405271.5

EPCAM-202, Transcript of epithelial cell adhesion molecule, humanhuman

TSL 5 BASIC

Gene EPCAM, Length 1,530 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPCAM-202ENST00000405271 NUP58Q9BVL2 599 aa23.73■■□□□ 1.39
EPCAM-202ENST00000405271 RSAD1Q9HA92 442 aa23.73■■□□□ 1.39
EPCAM-202ENST00000405271 HSFX4A0A1B0GTS1 333 aaPredicted RBP23.72■■□□□ 1.39
EPCAM-202ENST00000405271 HSFX3A0A1B0GWH4 333 aaPredicted RBP23.72■■□□□ 1.39
EPCAM-202ENST00000405271 RBAK-RBAKDNI3L0D1 243 aa23.72■■□□□ 1.39
EPCAM-202ENST00000405271 PTPN21Q16825 1174 aa23.72■■□□□ 1.39
EPCAM-202ENST00000405271 FIGNQ5HY92 759 aa23.72■■□□□ 1.39
EPCAM-202ENST00000405271 FAM109BQ6ICB4 259 aaPredicted RBP23.72■■□□□ 1.39
EPCAM-202ENST00000405271 TRIM65Q6PJ69 517 aa23.72■■□□□ 1.39
EPCAM-202ENST00000405271 PPP1R9BQ96SB3 815 aa23.72■■□□□ 1.39
EPCAM-202ENST00000405271 CRACR2AQ9BSW2 395 aa23.72■■□□□ 1.39
EPCAM-202ENST00000405271 PLCB1Q9NQ66 1216 aa23.72■■□□□ 1.39
EPCAM-202ENST00000405271 TMEM161AQ9NX61 479 aa23.72■■□□□ 1.39
EPCAM-202ENST00000405271 DAAM1Q9Y4D1 1078 aa23.72■■□□□ 1.39
EPCAM-202ENST00000405271 CDH23Q9H251 3354 aa23.71■■□□□ 1.39
EPCAM-202ENST00000405271 ENPP3O14638 875 aa23.71■■□□□ 1.39
EPCAM-202ENST00000405271 PON1P27169 355 aa23.71■■□□□ 1.39
EPCAM-202ENST00000405271 PIK3CAP42336 1068 aa23.71■■□□□ 1.39
EPCAM-202ENST00000405271 IKBKEQ14164 716 aa23.71■■□□□ 1.39
EPCAM-202ENST00000405271 TCTN1Q2MV58 587 aa23.71■■□□□ 1.39
EPCAM-202ENST00000405271 TRAPPC11Q7Z392 1133 aa23.71■■□□□ 1.39
EPCAM-202ENST00000405271 LPPQ93052 612 aa23.71■■□□□ 1.39
EPCAM-202ENST00000405271 LSM14BQ9BX40 385 aaKnown RBP23.71■■□□□ 1.39
EPCAM-202ENST00000405271 INTS2Q9H0H0 1204 aaKnown RBP23.71■■□□□ 1.39
EPCAM-202ENST00000405271 KLK14Q9P0G3 267 aa23.71■■□□□ 1.39
EPCAM-202ENST00000405271 UBQLN1Q9UMX0 589 aaKnown RBP23.71■■□□□ 1.39
EPCAM-202ENST00000405271 INPPL1O15357 1258 aa23.7■■□□□ 1.38
EPCAM-202ENST00000405271 EFCAB14O75071 495 aa23.7■■□□□ 1.38
EPCAM-202ENST00000405271 ZC3H11AO75152 810 aaKnown RBP eCLIP23.7■■□□□ 1.38
EPCAM-202ENST00000405271 PHACTR2O75167 634 aa23.7■■□□□ 1.38
EPCAM-202ENST00000405271 TRIM21P19474 475 aaKnown RBP23.7■■□□□ 1.38
EPCAM-202ENST00000405271 MLH1P40692 756 aa23.7■■□□□ 1.38
EPCAM-202ENST00000405271 ZBTB6Q15916 424 aa23.7■■□□□ 1.38
EPCAM-202ENST00000405271 SPC24Q8NBT2 197 aa23.7■■□□□ 1.38
EPCAM-202ENST00000405271 RNF169Q8NCN4 708 aa23.7■■□□□ 1.38
EPCAM-202ENST00000405271 EHBP1Q8NDI1 1231 aa23.7■■□□□ 1.38
EPCAM-202ENST00000405271 NEK11Q8NG66 645 aa23.7■■□□□ 1.38
EPCAM-202ENST00000405271 LMO3Q8TAP4 145 aa23.7■■□□□ 1.38
EPCAM-202ENST00000405271 TAS1R2Q8TE23 839 aa23.7■■□□□ 1.38
EPCAM-202ENST00000405271 ZMAT2Q96NC0 199 aaKnown RBP23.7■■□□□ 1.38
EPCAM-202ENST00000405271 RAB20Q9NX57 234 aa23.7■■□□□ 1.38
EPCAM-202ENST00000405271 ITGA11Q9UKX5 1188 aa23.7■■□□□ 1.38
EPCAM-202ENST00000405271 KIAA1671Q9BY89 1806 aa23.7■■□□□ 1.38
EPCAM-202ENST00000405271 COL6A3P12111 3177 aa23.7■■□□□ 1.38
EPCAM-202ENST00000405271 SMIM28A0A1B0GU29 152 aa23.69■■□□□ 1.38
EPCAM-202ENST00000405271 ABHD14A-ACY1A0A1B0GW23 586 aa23.69■■□□□ 1.38
EPCAM-202ENST00000405271 MEIS3P2A8K0S8 358 aa23.69■■□□□ 1.38
EPCAM-202ENST00000405271 HLA-DRAP01903 254 aa23.69■■□□□ 1.38
EPCAM-202ENST00000405271 TPM1P09493 284 aa23.69■■□□□ 1.38
EPCAM-202ENST00000405271 SLC9A1P19634 815 aa23.69■■□□□ 1.38
EPCAM-202ENST00000405271 KLK7P49862 253 aa23.69■■□□□ 1.38
EPCAM-202ENST00000405271 BEST2Q8NFU1 509 aa23.69■■□□□ 1.38
EPCAM-202ENST00000405271 GAD1Q99259 594 aa23.69■■□□□ 1.38
EPCAM-202ENST00000405271 MTIF3Q9H2K0 278 aaKnown RBP23.69■■□□□ 1.38
EPCAM-202ENST00000405271 SLC38A7Q9NVC3 462 aa23.69■■□□□ 1.38
EPCAM-202ENST00000405271 ARL5CA6NH57 179 aa23.69■■□□□ 1.38
EPCAM-202ENST00000405271 GRXCR1A8MXD5 290 aa23.69■■□□□ 1.38
EPCAM-202ENST00000405271 VNN1O95497 513 aa23.69■■□□□ 1.38
EPCAM-202ENST00000405271 CYP3A5P20815 502 aa23.69■■□□□ 1.38
EPCAM-202ENST00000405271 RFX1P22670 979 aa23.69■■□□□ 1.38
EPCAM-202ENST00000405271 TBX2Q13207 712 aaPredicted RBP23.69■■□□□ 1.38
EPCAM-202ENST00000405271 GLRA4Q5JXX5 417 aa23.69■■□□□ 1.38
EPCAM-202ENST00000405271 RSPH1Q8WYR4 309 aa23.69■■□□□ 1.38
EPCAM-202ENST00000405271 FAM84AQ96KN4 292 aa23.69■■□□□ 1.38
EPCAM-202ENST00000405271 ZFP42Q96MM3 310 aa23.69■■□□□ 1.38
EPCAM-202ENST00000405271 TTYH3Q9C0H2 523 aa23.69■■□□□ 1.38
EPCAM-202ENST00000405271 CXCL16Q9H2A7 254 aa23.69■■□□□ 1.38
EPCAM-202ENST00000405271 FAM207AQ9NSI2 230 aaPredicted RBP23.69■■□□□ 1.38
EPCAM-202ENST00000405271 MTMR10Q9NXD2 777 aa23.69■■□□□ 1.38
EPCAM-202ENST00000405271 FBXL5Q9UKA1 691 aa23.69■■□□□ 1.38
EPCAM-202ENST00000405271 LOC101059915A0A1B0GWI6 518 aaPredicted RBP23.68■■□□□ 1.38
EPCAM-202ENST00000405271 A0A1W2PQJ5 194 aa23.68■■□□□ 1.38
EPCAM-202ENST00000405271 PTGESO14684 152 aa23.68■■□□□ 1.38
EPCAM-202ENST00000405271 HOXA2O43364 376 aa23.68■■□□□ 1.38
EPCAM-202ENST00000405271 BAIAP3O94812 1187 aa23.68■■□□□ 1.38
EPCAM-202ENST00000405271 ACTN1P12814 892 aa23.68■■□□□ 1.38
EPCAM-202ENST00000405271 NCOA4Q13772 614 aa23.68■■□□□ 1.38
EPCAM-202ENST00000405271 GLB1LQ6UWU2 654 aa23.68■■□□□ 1.38
EPCAM-202ENST00000405271 PPFIBP1Q86W92 1011 aa23.68■■□□□ 1.38
EPCAM-202ENST00000405271 NPAS4Q8IUM7 802 aa23.68■■□□□ 1.38
EPCAM-202ENST00000405271 C1orf127Q8N9H9 656 aa23.68■■□□□ 1.38
EPCAM-202ENST00000405271 CCDC150Q8NCX0 1101 aa23.68■■□□□ 1.38
EPCAM-202ENST00000405271 SEMA4DQ92854 862 aa23.68■■□□□ 1.38
EPCAM-202ENST00000405271 PPP1R10Q96QC0 940 aaKnown RBP23.68■■□□□ 1.38
EPCAM-202ENST00000405271 EDEM3Q9BZQ6 932 aa23.68■■□□□ 1.38
EPCAM-202ENST00000405271 IMPG2Q9BZV3 1241 aa23.68■■□□□ 1.38
EPCAM-202ENST00000405271 SIX2Q9NPC8 291 aa23.68■■□□□ 1.38
EPCAM-202ENST00000405271 DPP3Q9NY33 737 aa23.68■■□□□ 1.38
EPCAM-202ENST00000405271 CEP72Q9P209 647 aa23.68■■□□□ 1.38
EPCAM-202ENST00000405271 LRFN2Q9ULH4 789 aa23.68■■□□□ 1.38
EPCAM-202ENST00000405271 PCDHB7Q9Y5E2 793 aa23.68■■□□□ 1.38
EPCAM-202ENST00000405271 TSC2P49815 1807 aa23.67■■□□□ 1.38
EPCAM-202ENST00000405271 GYPCP04921 128 aa23.67■■□□□ 1.38
EPCAM-202ENST00000405271 IBSPP21815 317 aaPredicted RBP23.67■■□□□ 1.38
EPCAM-202ENST00000405271 GRIK3Q13003 919 aa23.67■■□□□ 1.38
EPCAM-202ENST00000405271 TRPC3Q13507 836 aa23.67■■□□□ 1.38
EPCAM-202ENST00000405271 DPY19L2P1Q6NXN4 242 aa23.67■■□□□ 1.38
EPCAM-202ENST00000405271 GSTCDQ8NEC7 633 aa23.67■■□□□ 1.38
EPCAM-202ENST00000405271 NT5C1BQ96P26 610 aa23.67■■□□□ 1.38
EPCAM-202ENST00000405271 GANQ9H2C0 597 aa23.67■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms