RNA–Protein interactions for RNA: ENST00000402105.7

HPS4-203, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best) BASIC

Gene HPS4, Length 3,562 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-203ENST00000402105 MAGEC3Q8TD91 643 aa9.74□□□□□ -0.85
HPS4-203ENST00000402105 MCUR1Q96AQ8 359 aa9.74□□□□□ -0.85
HPS4-203ENST00000402105 AGBL1Q96MI9 1066 aa9.74□□□□□ -0.85
HPS4-203ENST00000402105 TUFT1Q9NNX1 390 aa9.74□□□□□ -0.85
HPS4-203ENST00000402105 ZFP69BQ9UJL9 534 aa9.74□□□□□ -0.85
HPS4-203ENST00000402105 ARAP2Q8WZ64 1704 aa9.74□□□□□ -0.85
HPS4-203ENST00000402105 DENND3A2RUS2 1198 aa9.74□□□□□ -0.85
HPS4-203ENST00000402105 UNC5CO95185 931 aa9.74□□□□□ -0.85
HPS4-203ENST00000402105 CFHP08603 1231 aa9.74□□□□□ -0.85
HPS4-203ENST00000402105 KRT4P19013 534 aa9.74□□□□□ -0.85
HPS4-203ENST00000402105 SPARCL1Q14515 664 aa9.74□□□□□ -0.85
HPS4-203ENST00000402105 CGB2Q6NT52 195 aa9.74□□□□□ -0.85
HPS4-203ENST00000402105 LVRNQ6Q4G3 990 aa9.74□□□□□ -0.85
HPS4-203ENST00000402105 TMEM179Q6ZVK1 233 aa9.74□□□□□ -0.85
HPS4-203ENST00000402105 LMNTD2Q8IXW0 634 aa9.74□□□□□ -0.85
HPS4-203ENST00000402105 LMO3Q8TAP4 145 aa9.74□□□□□ -0.85
HPS4-203ENST00000402105 GRK7Q8WTQ7 553 aa9.74□□□□□ -0.85
HPS4-203ENST00000402105 TBC1D10AQ9BXI6 508 aa9.74□□□□□ -0.85
HPS4-203ENST00000402105 OSBPL8Q9BZF1 889 aa9.74□□□□□ -0.85
HPS4-203ENST00000402105 COA1Q9GZY4 146 aa9.74□□□□□ -0.85
HPS4-203ENST00000402105 TMEM206Q9H813 350 aa9.74□□□□□ -0.85
HPS4-203ENST00000402105 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.74□□□□□ -0.85
HPS4-203ENST00000402105 CCDC88AQ3V6T2 1871 aa9.73□□□□□ -0.85
HPS4-203ENST00000402105 PSMD10O75832 226 aa9.73□□□□□ -0.85
HPS4-203ENST00000402105 ACOT2P49753 483 aa9.73□□□□□ -0.85
HPS4-203ENST00000402105 KRT39Q6A163 491 aa9.73□□□□□ -0.85
HPS4-203ENST00000402105 TMEM154Q6P9G4 183 aa9.73□□□□□ -0.85
HPS4-203ENST00000402105 TMEM270Q6UE05 265 aa9.73□□□□□ -0.85
HPS4-203ENST00000402105 ZC3H18Q86VM9 953 aaKnown RBP9.73□□□□□ -0.85
HPS4-203ENST00000402105 TTC17Q96AE7 1141 aa9.73□□□□□ -0.85
HPS4-203ENST00000402105 MAGEB18Q96M61 343 aa9.73□□□□□ -0.85
HPS4-203ENST00000402105 FNBP1Q96RU3 617 aa9.73□□□□□ -0.85
HPS4-203ENST00000402105 DCLK3Q9C098 648 aa9.73□□□□□ -0.85
HPS4-203ENST00000402105 RAB20Q9NX57 234 aa9.73□□□□□ -0.85
HPS4-203ENST00000402105 DLGAP2Q9P1A6 1054 aa9.73□□□□□ -0.85
HPS4-203ENST00000402105 SERPINA10Q9UK55 444 aa9.73□□□□□ -0.85
HPS4-203ENST00000402105 GTF3C4Q9UKN8 822 aa9.73□□□□□ -0.85
HPS4-203ENST00000402105 ZHX2Q9Y6X8 837 aa9.73□□□□□ -0.85
HPS4-203ENST00000402105 SHANK3Q9BYB0 1731 aa9.73□□□□□ -0.85
HPS4-203ENST00000402105 IGLV3-22A0A075B6J6 115 aa9.73□□□□□ -0.85
HPS4-203ENST00000402105 ZBED4O75132 1171 aa9.73□□□□□ -0.85
HPS4-203ENST00000402105 GGPS1O95749 300 aa9.73□□□□□ -0.85
HPS4-203ENST00000402105 BAG2O95816 211 aa9.73□□□□□ -0.85
HPS4-203ENST00000402105 KITP10721 976 aa9.73□□□□□ -0.85
HPS4-203ENST00000402105 SLC8A3P57103 927 aa9.73□□□□□ -0.85
HPS4-203ENST00000402105 TAS2R40P59535 323 aa9.73□□□□□ -0.85
HPS4-203ENST00000402105 CDR2Q01850 454 aa9.73□□□□□ -0.85
HPS4-203ENST00000402105 RCN2Q14257 317 aa9.73□□□□□ -0.85
HPS4-203ENST00000402105 EFTUD2Q15029 972 aaKnown RBP eCLIP9.73□□□□□ -0.85
HPS4-203ENST00000402105 ACAD10Q6JQN1 1059 aa9.73□□□□□ -0.85
HPS4-203ENST00000402105 DCUN1D2Q6PH85 259 aa9.73□□□□□ -0.85
HPS4-203ENST00000402105 SH3BP5LQ7L8J4 393 aa9.73□□□□□ -0.85
HPS4-203ENST00000402105 CCDC89Q8N998 374 aa9.73□□□□□ -0.85
HPS4-203ENST00000402105 FIZ1Q96SL8 496 aa9.73□□□□□ -0.85
HPS4-203ENST00000402105 CYTH2Q99418 400 aa9.73□□□□□ -0.85
HPS4-203ENST00000402105 TMEM121Q9BTD3 319 aa9.73□□□□□ -0.85
HPS4-203ENST00000402105 ARHGEF3Q9NR81 526 aa9.73□□□□□ -0.85
HPS4-203ENST00000402105 C1orf112Q9NSG2 853 aa9.73□□□□□ -0.85
HPS4-203ENST00000402105 SLC5A4Q9NY91 659 aa9.73□□□□□ -0.85
HPS4-203ENST00000402105 AGTPBP1Q9UPW5 1226 aa9.73□□□□□ -0.85
HPS4-203ENST00000402105 CHKBQ9Y259 395 aa9.73□□□□□ -0.85
HPS4-203ENST00000402105 PCDHB4Q9Y5E5 795 aa9.73□□□□□ -0.85
HPS4-203ENST00000402105 LRRD1A4D1F6 860 aa9.73□□□□□ -0.85
HPS4-203ENST00000402105 TLR3O15455 904 aaKnown RBP9.73□□□□□ -0.85
HPS4-203ENST00000402105 KRT1P04264 644 aa9.73□□□□□ -0.85
HPS4-203ENST00000402105 SSTR1P30872 391 aa9.73□□□□□ -0.85
HPS4-203ENST00000402105 CETN2P41208 172 aa9.73□□□□□ -0.85
HPS4-203ENST00000402105 IRX4P78413 519 aa9.73□□□□□ -0.85
HPS4-203ENST00000402105 MTFR1Q15390 333 aa9.73□□□□□ -0.85
HPS4-203ENST00000402105 SIX1Q15475 284 aaPredicted RBP9.73□□□□□ -0.85
HPS4-203ENST00000402105 SLC1A5Q15758 541 aa9.73□□□□□ -0.85
HPS4-203ENST00000402105 SMTNL2Q2TAL5 461 aa9.73□□□□□ -0.85
HPS4-203ENST00000402105 BBS9Q3SYG4 887 aa9.73□□□□□ -0.85
HPS4-203ENST00000402105 MIS18BP1Q6P0N0 1132 aa9.73□□□□□ -0.85
HPS4-203ENST00000402105 FAM13CQ8NE31 585 aa9.73□□□□□ -0.85
HPS4-203ENST00000402105 FBXL13Q8NEE6 735 aa9.73□□□□□ -0.85
HPS4-203ENST00000402105 SYT11Q9BT88 431 aa9.73□□□□□ -0.85
HPS4-203ENST00000402105 KCNH7Q9NS40 1196 aa9.73□□□□□ -0.85
HPS4-203ENST00000402105 WHRNQ9P202 907 aa9.73□□□□□ -0.85
HPS4-203ENST00000402105 NYAP2Q9P242 653 aa9.73□□□□□ -0.85
HPS4-203ENST00000402105 NOCTQ9UK39 431 aaKnown RBP9.73□□□□□ -0.85
HPS4-203ENST00000402105 DNPEPQ9ULA0 475 aa9.73□□□□□ -0.85
HPS4-203ENST00000402105 CCPG1Q9ULG6 757 aa9.73□□□□□ -0.85
HPS4-203ENST00000402105 STRCP1A6NGW2 1772 aa9.72□□□□□ -0.85
HPS4-203ENST00000402105 FRMPD4Q14CM0 1322 aa9.72□□□□□ -0.85
HPS4-203ENST00000402105 BHMG1C9JSJ3 638 aaPredicted RBP9.72□□□□□ -0.85
HPS4-203ENST00000402105 AP1G2O75843 785 aa9.72□□□□□ -0.85
HPS4-203ENST00000402105 CNGA1P29973 690 aa9.72□□□□□ -0.85
HPS4-203ENST00000402105 WDR44Q5JSH3 913 aa9.72□□□□□ -0.85
HPS4-203ENST00000402105 FYB2Q5VWT5 728 aa9.72□□□□□ -0.85
HPS4-203ENST00000402105 SV2AQ7L0J3 742 aa9.72□□□□□ -0.85
HPS4-203ENST00000402105 IL31RAQ8NI17 732 aa9.72□□□□□ -0.85
HPS4-203ENST00000402105 ZWILCHQ9H900 591 aa9.72□□□□□ -0.85
HPS4-203ENST00000402105 KMT5AQ9NQR1 393 aa9.72□□□□□ -0.85
HPS4-203ENST00000402105 DMAC2Q9NW81 257 aa9.72□□□□□ -0.85
HPS4-203ENST00000402105 ANKFY1Q9P2R3 1169 aa9.72□□□□□ -0.85
HPS4-203ENST00000402105 FAM198AQ9UFP1 575 aa9.72□□□□□ -0.85
HPS4-203ENST00000402105 CCDC189A1A4V9 331 aa9.72□□□□□ -0.85
HPS4-203ENST00000402105 DPPA5A6NC42 116 aa9.72□□□□□ -0.85
HPS4-203ENST00000402105 TCF4P15884 667 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms