RNA–Protein interactions for RNA: ENST00000401607.6

CPNE1-205, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,795 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-205ENST00000401607 PAPD7Q5XG87 772 aaKnown RBP27.54■■■□□ 2
CPNE1-205ENST00000401607 ERO1AQ96HE7 468 aa27.54■■■□□ 2
CPNE1-205ENST00000401607 PCDHB18PQ96TA0 734 aa27.54■■■□□ 2
CPNE1-205ENST00000401607 CARD6Q9BX69 1037 aa27.54■■■□□ 2
CPNE1-205ENST00000401607 TMCO5BA8MYB1 307 aa27.53■■■□□ 2
CPNE1-205ENST00000401607 HMGCRP04035 888 aa27.53■■■□□ 2
CPNE1-205ENST00000401607 GRM5P41594 1212 aa27.53■■■□□ 2
CPNE1-205ENST00000401607 GALCP54803 685 aa27.53■■■□□ 2
CPNE1-205ENST00000401607 DCAF4L1Q3SXM0 396 aa27.53■■■□□ 2
CPNE1-205ENST00000401607 TAF3Q5VWG9 929 aa27.53■■■□□ 2
CPNE1-205ENST00000401607 JADE1Q6IE81 842 aa27.53■■■□□ 2
CPNE1-205ENST00000401607 NME8Q8N427 588 aa27.53■■■□□ 2
CPNE1-205ENST00000401607 DDX1Q92499 740 aaKnown RBP27.53■■■□□ 2
CPNE1-205ENST00000401607 ALS2CR12Q96Q35 445 aa27.53■■■□□ 2
CPNE1-205ENST00000401607 IMPG2Q9BZV3 1241 aa27.53■■■□□ 2
CPNE1-205ENST00000401607 ASB7Q9H672 318 aa27.53■■■□□ 2
CPNE1-205ENST00000401607 DYNC1I1O14576 645 aa27.53■■■□□ 2
CPNE1-205ENST00000401607 NPTXRO95502 500 aa27.53■■■□□ 2
CPNE1-205ENST00000401607 TBXAS1P24557 533 aaPredicted RBP27.53■■■□□ 2
CPNE1-205ENST00000401607 PDE6CP51160 858 aa27.53■■■□□ 2
CPNE1-205ENST00000401607 FMO1Q01740 532 aa27.53■■■□□ 2
CPNE1-205ENST00000401607 TUBB2AQ13885 445 aa27.53■■■□□ 2
CPNE1-205ENST00000401607 CCSAPQ6IQ19 270 aaPredicted RBP27.53■■■□□ 2
CPNE1-205ENST00000401607 TAF2Q6P1X5 1199 aa27.53■■■□□ 2
CPNE1-205ENST00000401607 TUBB2BQ9BVA1 445 aa27.53■■■□□ 2
CPNE1-205ENST00000401607 MROH7Q68CQ1 1323 aa27.52■■■□□ 2
CPNE1-205ENST00000401607 MMEP08473 750 aa27.52■■■□□ 2
CPNE1-205ENST00000401607 CRYBB1P53674 252 aaPredicted RBP27.52■■■□□ 2
CPNE1-205ENST00000401607 HTRA3P83110 453 aa27.52■■■□□ 2
CPNE1-205ENST00000401607 GDF6Q6KF10 455 aaPredicted RBP27.52■■■□□ 2
CPNE1-205ENST00000401607 SLC27A1Q6PCB7 646 aa27.52■■■□□ 2
CPNE1-205ENST00000401607 UBR7Q8N806 425 aa27.52■■■□□ 2
CPNE1-205ENST00000401607 ACAP3Q96P50 834 aa27.52■■■□□ 2
CPNE1-205ENST00000401607 XYLT2Q9H1B5 865 aa27.52■■■□□ 2
CPNE1-205ENST00000401607 JRKLQ9Y4A0 524 aa27.52■■■□□ 2
CPNE1-205ENST00000401607 ASGR1P07306 291 aa27.51■■□□□ 1.99
CPNE1-205ENST00000401607 CST5P28325 142 aaPredicted RBP27.51■■□□□ 1.99
CPNE1-205ENST00000401607 NAP1L1P55209 391 aaKnown RBP27.51■■□□□ 1.99
CPNE1-205ENST00000401607 CDR2Q01850 454 aa27.51■■□□□ 1.99
CPNE1-205ENST00000401607 NCBP1Q09161 790 aaKnown RBP27.51■■□□□ 1.99
CPNE1-205ENST00000401607 TRPC3Q13507 836 aa27.51■■□□□ 1.99
CPNE1-205ENST00000401607 SGSM1Q2NKQ1 1148 aa27.51■■□□□ 1.99
CPNE1-205ENST00000401607 NOTUMQ6P988 496 aa27.51■■□□□ 1.99
CPNE1-205ENST00000401607 SIX4Q9UIU6 781 aa27.51■■□□□ 1.99
CPNE1-205ENST00000401607 PCDHGC5Q9Y5F6 944 aa27.51■■□□□ 1.99
CPNE1-205ENST00000401607 A0A0A6YYK5 440 aaPredicted RBP27.5■■□□□ 1.99
CPNE1-205ENST00000401607 CALCAP01258 141 aa27.5■■□□□ 1.99
CPNE1-205ENST00000401607 TFRCP02786 760 aaKnown RBP27.5■■□□□ 1.99
CPNE1-205ENST00000401607 TMEM253P0C7T8 217 aa27.5■■□□□ 1.99
CPNE1-205ENST00000401607 NAA30Q147X3 362 aaPredicted RBP27.5■■□□□ 1.99
CPNE1-205ENST00000401607 KCNA10Q16322 511 aa27.5■■□□□ 1.99
CPNE1-205ENST00000401607 ZNF710Q8N1W2 664 aa27.5■■□□□ 1.99
CPNE1-205ENST00000401607 TMEM130Q8N3G9 435 aa27.5■■□□□ 1.99
CPNE1-205ENST00000401607 C1orf127Q8N9H9 656 aa27.5■■□□□ 1.99
CPNE1-205ENST00000401607 EIF2AQ9BY44 585 aaKnown RBP27.5■■□□□ 1.99
CPNE1-205ENST00000401607 ISCUQ9H1K1 167 aa27.5■■□□□ 1.99
CPNE1-205ENST00000401607 CNTN6Q9UQ52 1028 aa27.5■■□□□ 1.99
CPNE1-205ENST00000401607 CXorf38Q8TB03 319 aa27.5■■□□□ 1.99
CPNE1-205ENST00000401607 PALMO75781 387 aa27.49■■□□□ 1.99
CPNE1-205ENST00000401607 CLSTN1O94985 981 aa27.49■■□□□ 1.99
CPNE1-205ENST00000401607 AXLP30530 894 aa27.49■■□□□ 1.99
CPNE1-205ENST00000401607 RAET1EQ8TD07 263 aa27.49■■□□□ 1.99
CPNE1-205ENST00000401607 NIF3L1Q9GZT8 377 aa27.49■■□□□ 1.99
CPNE1-205ENST00000401607 DDX20Q9UHI6 824 aaKnown RBP27.49■■□□□ 1.99
CPNE1-205ENST00000401607 PCDHB4Q9Y5E5 795 aa27.49■■□□□ 1.99
CPNE1-205ENST00000401607 MYH10P35580 1976 aa27.49■■□□□ 1.99
CPNE1-205ENST00000401607 NCANO14594 1321 aa27.49■■□□□ 1.99
CPNE1-205ENST00000401607 GRID2IPA4D2P6 1211 aa27.48■■□□□ 1.99
CPNE1-205ENST00000401607 YY1P25490 414 aa27.48■■□□□ 1.99
CPNE1-205ENST00000401607 ZNF699Q32M78 642 aa27.48■■□□□ 1.99
CPNE1-205ENST00000401607 APBB1IPQ7Z5R6 666 aaPredicted RBP27.48■■□□□ 1.99
CPNE1-205ENST00000401607 MNS1Q8NEH6 495 aa27.48■■□□□ 1.99
CPNE1-205ENST00000401607 PXYLP1Q8TE99 480 aa27.48■■□□□ 1.99
CPNE1-205ENST00000401607 WNT8BQ93098 351 aa27.48■■□□□ 1.99
CPNE1-205ENST00000401607 CCDC94Q9BW85 323 aaPredicted RBP27.48■■□□□ 1.99
CPNE1-205ENST00000401607 CELF4Q9BZC1 486 aaKnown RBP27.48■■□□□ 1.99
CPNE1-205ENST00000401607 SAR1BQ9Y6B6 198 aa27.48■■□□□ 1.99
CPNE1-205ENST00000401607 PCNTO95613 3336 aa27.48■■□□□ 1.99
CPNE1-205ENST00000401607 FAM170AA1A519 330 aa27.48■■□□□ 1.99
CPNE1-205ENST00000401607 ANKRD62A6NC57 917 aa27.48■■□□□ 1.99
CPNE1-205ENST00000401607 GNRH1P01148 92 aa27.48■■□□□ 1.99
CPNE1-205ENST00000401607 MYCNP04198 464 aaPredicted RBP27.48■■□□□ 1.99
CPNE1-205ENST00000401607 ABCB4P21439 1286 aa27.48■■□□□ 1.99
CPNE1-205ENST00000401607 RALGAPA2Q2PPJ7 1873 aa27.48■■□□□ 1.99
CPNE1-205ENST00000401607 FAM47CQ5HY64 1035 aa27.48■■□□□ 1.99
CPNE1-205ENST00000401607 SESTD1Q86VW0 696 aa27.48■■□□□ 1.99
CPNE1-205ENST00000401607 SNTG2Q9NY99 539 aa27.48■■□□□ 1.99
CPNE1-205ENST00000401607 NOL12Q9UGY1 213 aaKnown RBP eCLIP27.48■■□□□ 1.99
CPNE1-205ENST00000401607 PIN4Q9Y237 131 aaKnown RBP27.48■■□□□ 1.99
CPNE1-205ENST00000401607 C2CD2Q9Y426 696 aa27.48■■□□□ 1.99
CPNE1-205ENST00000401607 PCDHB2Q9Y5E7 798 aa27.48■■□□□ 1.99
CPNE1-205ENST00000401607 V9GYY5 206 aaPredicted RBP27.48■■□□□ 1.99
CPNE1-205ENST00000401607 GRIN2DO15399 1336 aa27.47■■□□□ 1.99
CPNE1-205ENST00000401607 RTN2O75298 545 aa27.47■■□□□ 1.99
CPNE1-205ENST00000401607 TADA3O75528 432 aa27.47■■□□□ 1.99
CPNE1-205ENST00000401607 GZMAP12544 262 aa27.47■■□□□ 1.99
CPNE1-205ENST00000401607 MRPS6P82932 125 aaKnown RBP27.47■■□□□ 1.99
CPNE1-205ENST00000401607 TMEM132DQ14C87 1099 aa27.47■■□□□ 1.99
CPNE1-205ENST00000401607 WHAMMP3Q1A5X7 153 aa27.47■■□□□ 1.99
CPNE1-205ENST00000401607 TMEM270Q6UE05 265 aa27.47■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms