RNA–Protein interactions for RNA: ENST00000400301.5

USP48-204, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 1 (best) BASIC

Gene USP48, Length 4,309 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-204ENST00000400301 RAPGEF5Q92565 580 aa19.66■□□□□ 0.74
USP48-204ENST00000400301 C2orf40Q9H1Z8 148 aa19.66■□□□□ 0.74
USP48-204ENST00000400301 SNED1Q8TER0 1413 aa19.66■□□□□ 0.74
USP48-204ENST00000400301 PRKCBP05771 671 aa19.66■□□□□ 0.74
USP48-204ENST00000400301 IREB2P48200 963 aaKnown RBP19.66■□□□□ 0.74
USP48-204ENST00000400301 STAT4Q14765 748 aa19.66■□□□□ 0.74
USP48-204ENST00000400301 KCTD19Q17RG1 926 aaPredicted RBP19.66■□□□□ 0.74
USP48-204ENST00000400301 BMT2Q1RMZ1 405 aa19.66■□□□□ 0.74
USP48-204ENST00000400301 WDR72Q3MJ13 1102 aa19.66■□□□□ 0.74
USP48-204ENST00000400301 PPP6R3Q5H9R7 873 aaPredicted RBP19.66■□□□□ 0.74
USP48-204ENST00000400301 LMNTD2Q8IXW0 634 aa19.66■□□□□ 0.74
USP48-204ENST00000400301 TATDN2Q93075 761 aa19.66■□□□□ 0.74
USP48-204ENST00000400301 GLIS2Q9BZE0 524 aaPredicted RBP19.66■□□□□ 0.74
USP48-204ENST00000400301 PKD1L3Q7Z443 1732 aa19.66■□□□□ 0.74
USP48-204ENST00000400301 C19orf81C9J6K1 198 aa19.65■□□□□ 0.74
USP48-204ENST00000400301 CPP00450 1065 aa19.65■□□□□ 0.74
USP48-204ENST00000400301 OSBPP22059 807 aa19.65■□□□□ 0.74
USP48-204ENST00000400301 AP3M2P53677 418 aa19.65■□□□□ 0.74
USP48-204ENST00000400301 ANGEL2Q5VTE6 544 aaKnown RBP19.65■□□□□ 0.74
USP48-204ENST00000400301 PHLDB3Q6NSJ2 640 aa19.65■□□□□ 0.74
USP48-204ENST00000400301 C11orf63Q6NUN7 778 aa19.65■□□□□ 0.74
USP48-204ENST00000400301 TMC3Q7Z5M5 1100 aa19.65■□□□□ 0.74
USP48-204ENST00000400301 DPP9Q86TI2 863 aa19.65■□□□□ 0.74
USP48-204ENST00000400301 MCEEQ96PE7 176 aa19.65■□□□□ 0.74
USP48-204ENST00000400301 PXMP2Q9NR77 195 aa19.65■□□□□ 0.74
USP48-204ENST00000400301 PLIN4Q96Q06 1357 aa19.65■□□□□ 0.74
USP48-204ENST00000400301 ZNF844Q08AG5 666 aa19.65■□□□□ 0.74
USP48-204ENST00000400301 TRADDQ15628 312 aa19.65■□□□□ 0.74
USP48-204ENST00000400301 TXLNGQ9NUQ3 528 aa19.65■□□□□ 0.74
USP48-204ENST00000400301 MAPTP10636 758 aaKnown RBP19.65■□□□□ 0.74
USP48-204ENST00000400301 MYO1EQ12965 1108 aa19.65■□□□□ 0.74
USP48-204ENST00000400301 ZNF677Q86XU0 584 aa19.65■□□□□ 0.74
USP48-204ENST00000400301 TMC2Q8TDI7 906 aa19.65■□□□□ 0.74
USP48-204ENST00000400301 EPS8L3Q8TE67 593 aaKnown RBP19.65■□□□□ 0.74
USP48-204ENST00000400301 CFAP36Q96G28 342 aa19.65■□□□□ 0.74
USP48-204ENST00000400301 KLC4Q9NSK0 619 aa19.65■□□□□ 0.74
USP48-204ENST00000400301 PGM5Q15124 567 aa19.65■□□□□ 0.74
USP48-204ENST00000400301 RCOR2Q8IZ40 523 aa19.65■□□□□ 0.74
USP48-204ENST00000400301 MED10Q9BTT4 135 aa19.65■□□□□ 0.74
USP48-204ENST00000400301 SEMA4AQ9H3S1 761 aa19.65■□□□□ 0.74
USP48-204ENST00000400301 ACP6Q9NPH0 428 aa19.65■□□□□ 0.74
USP48-204ENST00000400301 CRYBG1Q9Y4K1 1723 aa19.64■□□□□ 0.74
USP48-204ENST00000400301 TMEM120BA0PK00 339 aa19.64■□□□□ 0.73
USP48-204ENST00000400301 M0QYV0 167 aa19.64■□□□□ 0.73
USP48-204ENST00000400301 KRT3P12035 628 aa19.64■□□□□ 0.73
USP48-204ENST00000400301 TNFRSF8P28908 595 aa19.64■□□□□ 0.73
USP48-204ENST00000400301 CCNA1P78396 465 aa19.64■□□□□ 0.73
USP48-204ENST00000400301 CYP24A1Q07973 514 aa19.64■□□□□ 0.73
USP48-204ENST00000400301 TFDP2Q14188 446 aa19.64■□□□□ 0.73
USP48-204ENST00000400301 KRT35Q92764 455 aa19.64■□□□□ 0.73
USP48-204ENST00000400301 DNAJC18Q9H819 358 aa19.64■□□□□ 0.73
USP48-204ENST00000400301 HEY1Q9Y5J3 304 aa19.64■□□□□ 0.73
USP48-204ENST00000400301 MAPK13O15264 365 aa19.64■□□□□ 0.73
USP48-204ENST00000400301 SEPT1Q8WYJ6 367 aa19.64■□□□□ 0.73
USP48-204ENST00000400301 FAF2Q96CS3 445 aa19.64■□□□□ 0.73
USP48-204ENST00000400301 SLTMQ9NWH9 1034 aaKnown RBP eCLIP19.64■□□□□ 0.736e-6■■■■□ 22.5
USP48-204ENST00000400301 DDX56Q9NY93 547 aaKnown RBP19.64■□□□□ 0.73
USP48-204ENST00000400301 HACL1Q9UJ83 578 aa19.64■□□□□ 0.73
USP48-204ENST00000400301 PYGMP11217 842 aa19.64■□□□□ 0.73
USP48-204ENST00000400301 DRP2Q13474 957 aa19.64■□□□□ 0.73
USP48-204ENST00000400301 NOP9Q86U38 636 aaKnown RBP19.64■□□□□ 0.73
USP48-204ENST00000400301 OTUD5Q96G74 571 aa19.64■□□□□ 0.73
USP48-204ENST00000400301 SPATA33Q96N06 139 aa19.64■□□□□ 0.73
USP48-204ENST00000400301 PPP1R12CQ9BZL4 782 aa19.64■□□□□ 0.73
USP48-204ENST00000400301 MAP3K20Q9NYL2 800 aaKnown RBP19.64■□□□□ 0.73
USP48-204ENST00000400301 SYNPO2Q9UMS6 1093 aa19.64■□□□□ 0.73
USP48-204ENST00000400301 WEE2P0C1S8 567 aa19.63■□□□□ 0.73
USP48-204ENST00000400301 ITGB5P18084 799 aa19.63■□□□□ 0.73
USP48-204ENST00000400301 PHKA2P46019 1235 aa19.63■□□□□ 0.73
USP48-204ENST00000400301 CUL2Q13617 745 aa19.63■□□□□ 0.73
USP48-204ENST00000400301 PAXIP1Q6ZW49 1069 aaPredicted RBP19.63■□□□□ 0.73
USP48-204ENST00000400301 MICAL1Q8TDZ2 1067 aa19.63■□□□□ 0.73
USP48-204ENST00000400301 PARD3BQ8TEW8 1205 aa19.63■□□□□ 0.73
USP48-204ENST00000400301 ROPN1BQ9BZX4 212 aaPredicted RBP19.63■□□□□ 0.73
USP48-204ENST00000400301 ROPN1Q9HAT0 212 aaPredicted RBP19.63■□□□□ 0.73
USP48-204ENST00000400301 ASNSD1Q9NWL6 643 aa19.63■□□□□ 0.73
USP48-204ENST00000400301 RASSF10A6NK89 507 aa19.63■□□□□ 0.73
USP48-204ENST00000400301 BTNL10A8MVZ5 291 aa19.63■□□□□ 0.73
USP48-204ENST00000400301 RARGP13631 454 aa19.63■□□□□ 0.73
USP48-204ENST00000400301 GARTP22102 1010 aa19.63■□□□□ 0.73
USP48-204ENST00000400301 GTF2H1P32780 548 aa19.63■□□□□ 0.73
USP48-204ENST00000400301 SESN3P58005 492 aa19.63■□□□□ 0.73
USP48-204ENST00000400301 FAM102AQ5T9C2 384 aaPredicted RBP19.63■□□□□ 0.73
USP48-204ENST00000400301 PCGF5Q86SE9 256 aa19.63■□□□□ 0.73
USP48-204ENST00000400301 USP54Q70EL1 1684 aa19.63■□□□□ 0.73
USP48-204ENST00000400301 TRIM68Q6AZZ1 485 aa19.63■□□□□ 0.73
USP48-204ENST00000400301 ANKMY2Q8IV38 441 aa19.63■□□□□ 0.73
USP48-204ENST00000400301 FAM49AQ9H0Q0 323 aaPredicted RBP19.63■□□□□ 0.73
USP48-204ENST00000400301 IFT122Q9HBG6 1241 aa19.63■□□□□ 0.73
USP48-204ENST00000400301 WNT10BO00744 389 aa19.62■□□□□ 0.73
USP48-204ENST00000400301 SKOR1P84550 965 aa19.62■□□□□ 0.73
USP48-204ENST00000400301 SPOPLQ6IQ16 392 aa19.62■□□□□ 0.73
USP48-204ENST00000400301 SH3BP5LQ7L8J4 393 aa19.62■□□□□ 0.73
USP48-204ENST00000400301 FEZF2Q8TBJ5 459 aa19.62■□□□□ 0.73
USP48-204ENST00000400301 HAUS2Q9NVX0 235 aa19.62■□□□□ 0.73
USP48-204ENST00000400301 USP20Q9Y2K6 914 aa19.62■□□□□ 0.73
USP48-204ENST00000400301 NEU2Q9Y3R4 380 aa19.62■□□□□ 0.73
USP48-204ENST00000400301 IQANK1A0A1B0GTG1 560 aa19.62■□□□□ 0.73
USP48-204ENST00000400301 NPM3O75607 178 aaKnown RBP19.62■□□□□ 0.73
USP48-204ENST00000400301 OATP04181 439 aa19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms