RNA–Protein interactions for RNA: ENST00000400186.7

CSMD1-202, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 10,938 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-202ENST00000400186 TPI1P60174 286 aa10.09□□□□□ -0.79
CSMD1-202ENST00000400186 LONRF1Q17RB8 773 aa10.09□□□□□ -0.79
CSMD1-202ENST00000400186 COBLL1Q53SF7 1204 aa10.09□□□□□ -0.79
CSMD1-202ENST00000400186 DIABLOQ9NR28 239 aa10.09□□□□□ -0.79
CSMD1-202ENST00000400186 RBAKQ9NYW8 714 aaPredicted RBP10.09□□□□□ -0.79
CSMD1-202ENST00000400186 PCDHA6Q9UN73 950 aa10.09□□□□□ -0.79
CSMD1-202ENST00000400186 PCDHA8Q9Y5H6 950 aa10.09□□□□□ -0.79
CSMD1-202ENST00000400186 KDM6BO15054 1643 aa10.09□□□□□ -0.79
CSMD1-202ENST00000400186 RFX7Q2KHR2 1363 aa10.09□□□□□ -0.79
CSMD1-202ENST00000400186 SESN2P58004 480 aaPredicted RBP10.09□□□□□ -0.79
CSMD1-202ENST00000400186 DCAF4L1Q3SXM0 396 aa10.09□□□□□ -0.79
CSMD1-202ENST00000400186 PIK3R5Q8WYR1 880 aa10.09□□□□□ -0.79
CSMD1-202ENST00000400186 LCP1P13796 627 aa10.09□□□□□ -0.79
CSMD1-202ENST00000400186 IYDQ6PHW0 289 aa10.09□□□□□ -0.79
CSMD1-202ENST00000400186 OLFML3Q9NRN5 406 aa10.09□□□□□ -0.79
CSMD1-202ENST00000400186 TBC1D22BQ9NU19 505 aa10.09□□□□□ -0.79
CSMD1-202ENST00000400186 CAND2O75155 1236 aa10.09□□□□□ -0.79
CSMD1-202ENST00000400186 AGBL2Q5U5Z8 902 aa10.09□□□□□ -0.79
CSMD1-202ENST00000400186 MTHFD1LQ6UB35 978 aa10.09□□□□□ -0.79
CSMD1-202ENST00000400186 GUF1Q8N442 669 aaKnown RBP10.09□□□□□ -0.79
CSMD1-202ENST00000400186 TRIM51Q9BSJ1 452 aa10.09□□□□□ -0.79
CSMD1-202ENST00000400186 XPO7Q9UIA9 1087 aaKnown RBP10.09□□□□□ -0.79
CSMD1-202ENST00000400186 ATP6V1B1P15313 513 aa10.08□□□□□ -0.8
CSMD1-202ENST00000400186 STAT3P40763 770 aa10.08□□□□□ -0.8
CSMD1-202ENST00000400186 CDK17Q00537 523 aa10.08□□□□□ -0.8
CSMD1-202ENST00000400186 SEMA3FQ13275 785 aa10.08□□□□□ -0.8
CSMD1-202ENST00000400186 MTF1Q14872 753 aa10.08□□□□□ -0.8
CSMD1-202ENST00000400186 DCUN1D1Q96GG9 259 aa10.08□□□□□ -0.8
CSMD1-202ENST00000400186 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.08□□□□□ -0.8
CSMD1-202ENST00000400186 FEM1BQ9UK73 627 aa10.08□□□□□ -0.8
CSMD1-202ENST00000400186 FARP1Q9Y4F1 1045 aaPredicted RBP10.08□□□□□ -0.8
CSMD1-202ENST00000400186 NMT2O60551 498 aa10.08□□□□□ -0.8
CSMD1-202ENST00000400186 GNAT1P11488 350 aa10.08□□□□□ -0.8
CSMD1-202ENST00000400186 SFNP31947 248 aa10.08□□□□□ -0.8
CSMD1-202ENST00000400186 DUOXA2Q1HG44 320 aa10.08□□□□□ -0.8
CSMD1-202ENST00000400186 ATPAF2Q8N5M1 289 aa10.08□□□□□ -0.8
CSMD1-202ENST00000400186 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.08□□□□□ -0.8
CSMD1-202ENST00000400186 ASAP3Q8TDY4 903 aa10.08□□□□□ -0.8
CSMD1-202ENST00000400186 BSDC1Q9NW68 430 aaPredicted RBP10.08□□□□□ -0.8
CSMD1-202ENST00000400186 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.08□□□□□ -0.8
CSMD1-202ENST00000400186 DLGAP2Q9P1A6 1054 aa10.08□□□□□ -0.8
CSMD1-202ENST00000400186 PDP2Q9P2J9 529 aa10.08□□□□□ -0.8
CSMD1-202ENST00000400186 SPATA31E1Q6ZUB1 1445 aa10.08□□□□□ -0.8
CSMD1-202ENST00000400186 NFIBO00712 420 aa10.08□□□□□ -0.8
CSMD1-202ENST00000400186 KRT76Q01546 638 aa10.08□□□□□ -0.8
CSMD1-202ENST00000400186 WASHC5Q12768 1159 aa10.08□□□□□ -0.8
CSMD1-202ENST00000400186 PTK7Q13308 1070 aa10.08□□□□□ -0.8
CSMD1-202ENST00000400186 GRM4Q14833 912 aa10.08□□□□□ -0.8
CSMD1-202ENST00000400186 UGP2Q16851 508 aa10.08□□□□□ -0.8
CSMD1-202ENST00000400186 ARHGEF38Q9NXL2 777 aa10.08□□□□□ -0.8
CSMD1-202ENST00000400186 RP1P56715 2156 aa10.08□□□□□ -0.8
CSMD1-202ENST00000400186 UBTFL6P0CB48 400 aaPredicted RBP10.08□□□□□ -0.8
CSMD1-202ENST00000400186 TTC23LQ6PF05 361 aa10.08□□□□□ -0.8
CSMD1-202ENST00000400186 PRUNE1Q86TP1 453 aa10.08□□□□□ -0.8
CSMD1-202ENST00000400186 SIK2Q9H0K1 926 aa10.08□□□□□ -0.8
CSMD1-202ENST00000400186 RAB14P61106 215 aa10.08□□□□□ -0.8
CSMD1-202ENST00000400186 SYCP2LQ5T4T6 812 aa10.08□□□□□ -0.8
CSMD1-202ENST00000400186 PKN3Q6P5Z2 889 aa10.08□□□□□ -0.8
CSMD1-202ENST00000400186 ASNSP08243 561 aa10.08□□□□□ -0.8
CSMD1-202ENST00000400186 SLC9A5Q14940 896 aa10.08□□□□□ -0.8
CSMD1-202ENST00000400186 FAM20AQ96MK3 541 aa10.08□□□□□ -0.8
CSMD1-202ENST00000400186 VIRMAQ69YN4 1812 aaKnown RBP10.08□□□□□ -0.8
CSMD1-202ENST00000400186 CYP2D6P10635 497 aa10.08□□□□□ -0.8
CSMD1-202ENST00000400186 NNMTP40261 264 aa10.08□□□□□ -0.8
CSMD1-202ENST00000400186 TRIM69Q86WT6 500 aa10.08□□□□□ -0.8
CSMD1-202ENST00000400186 SLC35G2Q8TBE7 412 aa10.08□□□□□ -0.8
CSMD1-202ENST00000400186 TRIM8Q9BZR9 551 aa10.08□□□□□ -0.8
CSMD1-202ENST00000400186 FCER1AP12319 257 aa10.08□□□□□ -0.8
CSMD1-202ENST00000400186 PSMA4P25789 261 aaKnown RBP10.08□□□□□ -0.8
CSMD1-202ENST00000400186 QARSP47897 775 aaKnown RBP10.08□□□□□ -0.8
CSMD1-202ENST00000400186 SGSM3Q96HU1 749 aa10.08□□□□□ -0.8
CSMD1-202ENST00000400186 CLCA2Q9UQC9 943 aa10.08□□□□□ -0.8
CSMD1-202ENST00000400186 ICE1Q9Y2F5 2266 aa10.08□□□□□ -0.8
CSMD1-202ENST00000400186 ERVV-1B6SEH8 477 aa10.08□□□□□ -0.8
CSMD1-202ENST00000400186 AP3B1O00203 1094 aa10.08□□□□□ -0.8
CSMD1-202ENST00000400186 TOMM70O94826 608 aa10.08□□□□□ -0.8
CSMD1-202ENST00000400186 PLA2G4AP47712 749 aa10.08□□□□□ -0.8
CSMD1-202ENST00000400186 ZNF200P98182 395 aaPredicted RBP10.08□□□□□ -0.8
CSMD1-202ENST00000400186 ACCSLQ4AC99 568 aa10.08□□□□□ -0.8
CSMD1-202ENST00000400186 SIRT2Q8IXJ6 389 aa10.08□□□□□ -0.8
CSMD1-202ENST00000400186 IL1RL2Q9HB29 575 aa10.08□□□□□ -0.8
CSMD1-202ENST00000400186 BARHL2Q9NY43 387 aa10.08□□□□□ -0.8
CSMD1-202ENST00000400186 ZBTB1Q9Y2K1 713 aa10.08□□□□□ -0.8
CSMD1-202ENST00000400186 TMEM120BA0PK00 339 aa10.07□□□□□ -0.8
CSMD1-202ENST00000400186 ANGPT1Q15389 498 aa10.07□□□□□ -0.8
CSMD1-202ENST00000400186 IFNEQ86WN2 208 aa10.07□□□□□ -0.8
CSMD1-202ENST00000400186 CNBD2Q96M20 576 aa10.07□□□□□ -0.8
CSMD1-202ENST00000400186 C2orf40Q9H1Z8 148 aa10.07□□□□□ -0.8
CSMD1-202ENST00000400186 AP4S1Q9Y587 144 aa10.07□□□□□ -0.8
CSMD1-202ENST00000400186 CEP170Q5SW79 1584 aa10.07□□□□□ -0.8
CSMD1-202ENST00000400186 NRKQ7Z2Y5 1582 aa10.07□□□□□ -0.8
CSMD1-202ENST00000400186 SRP72O76094 671 aaKnown RBP10.07□□□□□ -0.8
CSMD1-202ENST00000400186 HSPA13P48723 471 aa10.07□□□□□ -0.8
CSMD1-202ENST00000400186 TTC33Q6PID6 262 aaPredicted RBP10.07□□□□□ -0.8
CSMD1-202ENST00000400186 C4orf33Q8N1A6 199 aa10.07□□□□□ -0.8
CSMD1-202ENST00000400186 RBM46Q8TBY0 533 aaKnown RBP10.07□□□□□ -0.8
CSMD1-202ENST00000400186 PTPRN2Q92932 1015 aa10.07□□□□□ -0.8
CSMD1-202ENST00000400186 SENP7Q9BQF6 1050 aa10.07□□□□□ -0.8
CSMD1-202ENST00000400186 SPON2Q9BUD6 331 aa10.07□□□□□ -0.8
CSMD1-202ENST00000400186 BBS2Q9BXC9 721 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms