RNA–Protein interactions for RNA: ENST00000399903.6

PTPRA-205, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5 BASIC

Gene PTPRA, Length 3,337 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-205ENST00000399903 EXOC1LA0A1B0GW35 172 aa18.14■□□□□ 0.49
PTPRA-205ENST00000399903 ANKRD62A6NC57 917 aa18.14■□□□□ 0.49
PTPRA-205ENST00000399903 CREB3O43889 395 aa18.14■□□□□ 0.49
PTPRA-205ENST00000399903 ATP5HO75947 161 aa18.14■□□□□ 0.49
PTPRA-205ENST00000399903 MKRN3Q13064 507 aaKnown RBP18.14■□□□□ 0.49
PTPRA-205ENST00000399903 COG2Q14746 738 aa18.14■□□□□ 0.49
PTPRA-205ENST00000399903 ZNF772Q68DY9 489 aaPredicted RBP18.14■□□□□ 0.49
PTPRA-205ENST00000399903 CCDC125Q86Z20 511 aa18.14■□□□□ 0.49
PTPRA-205ENST00000399903 ANKRD35Q8N283 1001 aa18.14■□□□□ 0.49
PTPRA-205ENST00000399903 AAASQ9NRG9 546 aa18.14■□□□□ 0.49
PTPRA-205ENST00000399903 CHST7Q9NS84 486 aa18.14■□□□□ 0.49
PTPRA-205ENST00000399903 T-ENOLP0DO92 83 aa18.14■□□□□ 0.49
PTPRA-205ENST00000399903 ATF2P15336 505 aa18.14■□□□□ 0.49
PTPRA-205ENST00000399903 EDRF1Q3B7T1 1238 aa18.14■□□□□ 0.49
PTPRA-205ENST00000399903 ARSHQ5FYA8 562 aa18.14■□□□□ 0.49
PTPRA-205ENST00000399903 OR52E8Q6IFG1 317 aa18.14■□□□□ 0.49
PTPRA-205ENST00000399903 GSTA5Q7RTV2 222 aa18.14■□□□□ 0.49
PTPRA-205ENST00000399903 ELMO3Q96BJ8 720 aa18.14■□□□□ 0.49
PTPRA-205ENST00000399903 ANO3Q9BYT9 981 aa18.14■□□□□ 0.49
PTPRA-205ENST00000399903 GLIS2Q9BZE0 524 aaPredicted RBP18.14■□□□□ 0.49
PTPRA-205ENST00000399903 TMEM39BQ9GZU3 492 aa18.14■□□□□ 0.49
PTPRA-205ENST00000399903 DHX36Q9H2U1 1008 aaKnown RBP18.14■□□□□ 0.49
PTPRA-205ENST00000399903 C12orf65Q9H3J6 166 aaKnown RBP18.14■□□□□ 0.49
PTPRA-205ENST00000399903 SDAD1Q9NVU7 687 aaKnown RBP eCLIP18.14■□□□□ 0.494e-6■■■■□ 23.7
PTPRA-205ENST00000399903 MAP3K7O43318 606 aa18.13■□□□□ 0.49
PTPRA-205ENST00000399903 DGKZQ13574 1117 aa18.13■□□□□ 0.49
PTPRA-205ENST00000399903 NLRP9Q7RTR0 991 aa18.13■□□□□ 0.49
PTPRA-205ENST00000399903 TAB3Q8N5C8 712 aaPredicted RBP18.13■□□□□ 0.49
PTPRA-205ENST00000399903 RUSC1Q9BVN2 902 aa18.13■□□□□ 0.49
PTPRA-205ENST00000399903 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.13■□□□□ 0.49
PTPRA-205ENST00000399903 UBE2TQ9NPD8 197 aaPredicted RBP18.13■□□□□ 0.49
PTPRA-205ENST00000399903 NINJ2Q9NZG7 142 aa18.13■□□□□ 0.49
PTPRA-205ENST00000399903 PCDHA2Q9Y5H9 948 aa18.13■□□□□ 0.49
PTPRA-205ENST00000399903 ESYT2A0FGR8 921 aa18.13■□□□□ 0.49
PTPRA-205ENST00000399903 GOLGA8RI6L899 631 aa18.13■□□□□ 0.49
PTPRA-205ENST00000399903 NMT1P30419 496 aaKnown RBP18.13■□□□□ 0.49
PTPRA-205ENST00000399903 SKIV2L2P42285 1042 aaKnown RBP18.13■□□□□ 0.49
PTPRA-205ENST00000399903 MCL1Q07820 350 aa18.13■□□□□ 0.49
PTPRA-205ENST00000399903 MDH1BQ5I0G3 518 aa18.13■□□□□ 0.49
PTPRA-205ENST00000399903 LRRC74BQ6ZQY2 392 aa18.13■□□□□ 0.49
PTPRA-205ENST00000399903 NRG4Q8WWG1 115 aa18.13■□□□□ 0.49
PTPRA-205ENST00000399903 NDNQ99608 321 aa18.13■□□□□ 0.49
PTPRA-205ENST00000399903 TTC1Q99614 292 aa18.13■□□□□ 0.49
PTPRA-205ENST00000399903 BHMT2Q9H2M3 363 aa18.13■□□□□ 0.49
PTPRA-205ENST00000399903 PCYOX1Q9UHG3 505 aa18.13■□□□□ 0.49
PTPRA-205ENST00000399903 WASF2Q9Y6W5 498 aa18.13■□□□□ 0.49
PTPRA-205ENST00000399903 MARSP56192 900 aaKnown RBP18.13■□□□□ 0.49
PTPRA-205ENST00000399903 JAM2P57087 298 aa18.13■□□□□ 0.49
PTPRA-205ENST00000399903 DEUP1Q05D60 604 aa18.13■□□□□ 0.49
PTPRA-205ENST00000399903 THOC5Q13769 683 aaKnown RBP18.13■□□□□ 0.49
PTPRA-205ENST00000399903 FLAD1Q8NFF5 587 aa18.13■□□□□ 0.49
PTPRA-205ENST00000399903 BORCS6Q96GS4 357 aa18.13■□□□□ 0.49
PTPRA-205ENST00000399903 ANKRD27Q96NW4 1050 aa18.13■□□□□ 0.49
PTPRA-205ENST00000399903 KLF6Q99612 283 aaPredicted RBP18.13■□□□□ 0.49
PTPRA-205ENST00000399903 TMEM109Q9BVC6 243 aa18.13■□□□□ 0.49
PTPRA-205ENST00000399903 VPS37BQ9H9H4 285 aa18.13■□□□□ 0.49
PTPRA-205ENST00000399903 TMEM165Q9HC07 324 aa18.13■□□□□ 0.49
PTPRA-205ENST00000399903 PLIN4Q96Q06 1357 aa18.12■□□□□ 0.49
PTPRA-205ENST00000399903 CHMP2AO43633 222 aa18.12■□□□□ 0.49
PTPRA-205ENST00000399903 OPHN1O60890 802 aa18.12■□□□□ 0.49
PTPRA-205ENST00000399903 CETN2P41208 172 aa18.12■□□□□ 0.49
PTPRA-205ENST00000399903 CBWD6Q4V339 395 aa18.12■□□□□ 0.49
PTPRA-205ENST00000399903 CBWD3Q5JTY5 395 aa18.12■□□□□ 0.49
PTPRA-205ENST00000399903 CBWD5Q5RIA9 395 aa18.12■□□□□ 0.49
PTPRA-205ENST00000399903 DAB2IPQ5VWQ8 1189 aa18.12■□□□□ 0.49
PTPRA-205ENST00000399903 GRAMD1AQ96CP6 724 aa18.12■□□□□ 0.49
PTPRA-205ENST00000399903 CCDC17Q96LX7 622 aa18.12■□□□□ 0.49
PTPRA-205ENST00000399903 CDH16O75309 829 aa18.12■□□□□ 0.49
PTPRA-205ENST00000399903 CFBP00751 764 aa18.12■□□□□ 0.49
PTPRA-205ENST00000399903 NEK3P51956 506 aa18.12■□□□□ 0.49
PTPRA-205ENST00000399903 SPARCL1Q14515 664 aa18.12■□□□□ 0.49
PTPRA-205ENST00000399903 ACSBG2Q5FVE4 666 aa18.12■□□□□ 0.49
PTPRA-205ENST00000399903 DPY19L2P1Q6NXN4 242 aa18.12■□□□□ 0.49
PTPRA-205ENST00000399903 POTEAQ6S8J7 498 aa18.12■□□□□ 0.49
PTPRA-205ENST00000399903 MYCT1Q8N699 235 aa18.12■□□□□ 0.49
PTPRA-205ENST00000399903 FBXO28Q9NVF7 368 aa18.12■□□□□ 0.49
PTPRA-205ENST00000399903 PKD2L1Q9P0L9 805 aa18.12■□□□□ 0.49
PTPRA-205ENST00000399903 DNM3Q9UQ16 869 aa18.12■□□□□ 0.49
PTPRA-205ENST00000399903 TBX10O75333 385 aa18.11■□□□□ 0.49
PTPRA-205ENST00000399903 PIK3CAP42336 1068 aa18.11■□□□□ 0.49
PTPRA-205ENST00000399903 TBC1D10BQ4KMP7 808 aaPredicted RBP18.11■□□□□ 0.49
PTPRA-205ENST00000399903 PPP4R3CPQ6ZMV5 832 aa18.11■□□□□ 0.49
PTPRA-205ENST00000399903 STK33Q9BYT3 514 aa18.11■□□□□ 0.49
PTPRA-205ENST00000399903 TRABDQ9H4I3 376 aa18.11■□□□□ 0.49
PTPRA-205ENST00000399903 METTL14Q9HCE5 456 aaKnown RBP18.11■□□□□ 0.49
PTPRA-205ENST00000399903 CHCHD3Q9NX63 227 aaKnown RBP18.11■□□□□ 0.49
PTPRA-205ENST00000399903 LTBP1Q14766 1721 aa18.11■□□□□ 0.49
PTPRA-205ENST00000399903 C2orf71A6NGG8 1288 aa18.11■□□□□ 0.49
PTPRA-205ENST00000399903 MEIS2O14770 477 aa18.11■□□□□ 0.49
PTPRA-205ENST00000399903 SMARCA1P28370 1054 aa18.11■□□□□ 0.49
PTPRA-205ENST00000399903 PTPN4P29074 926 aa18.11■□□□□ 0.49
PTPRA-205ENST00000399903 RPA3P35244 121 aaPredicted RBP18.11■□□□□ 0.49
PTPRA-205ENST00000399903 HOXD13P35453 343 aa18.11■□□□□ 0.49
PTPRA-205ENST00000399903 SGSM1Q2NKQ1 1148 aa18.11■□□□□ 0.49
PTPRA-205ENST00000399903 WASHC2DQ5SRD0 308 aa18.11■□□□□ 0.49
PTPRA-205ENST00000399903 C4orf50Q6ZRC1 276 aa18.11■□□□□ 0.49
PTPRA-205ENST00000399903 ZNF365Q70YC5 407 aa18.11■□□□□ 0.49
PTPRA-205ENST00000399903 AGPAT1Q99943 283 aa18.11■□□□□ 0.49
PTPRA-205ENST00000399903 STK32BQ9NY57 414 aa18.11■□□□□ 0.49
PTPRA-205ENST00000399903 CCDC160A6NGH7 325 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms