RNA–Protein interactions for RNA: ENST00000399075.6

C4orf3-201, Transcript of chromosome 4 open reading frame 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene C4orf3, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf3-201ENST00000399075 XKR3Q5GH77 459 aa12.14□□□□□ -0.47
C4orf3-201ENST00000399075 SWSAP1Q6NVH7 229 aa12.14□□□□□ -0.47
C4orf3-201ENST00000399075 TRMT1LQ7Z2T5 733 aaKnown RBP12.14□□□□□ -0.47
C4orf3-201ENST00000399075 TAX1BP1Q86VP1 789 aa12.14□□□□□ -0.47
C4orf3-201ENST00000399075 ZNF516Q92618 1163 aa12.14□□□□□ -0.47
C4orf3-201ENST00000399075 BICD1Q96G01 975 aa12.14□□□□□ -0.47
C4orf3-201ENST00000399075 ZNF317Q96PQ6 595 aaPredicted RBP12.14□□□□□ -0.47
C4orf3-201ENST00000399075 POLR3FQ9H1D9 316 aaPredicted RBP12.14□□□□□ -0.47
C4orf3-201ENST00000399075 AS3MTQ9HBK9 375 aa12.14□□□□□ -0.47
C4orf3-201ENST00000399075 HOMER3Q9NSC5 361 aa12.14□□□□□ -0.47
C4orf3-201ENST00000399075 PTPN22Q9Y2R2 807 aa12.14□□□□□ -0.47
C4orf3-201ENST00000399075 RASGRF2O14827 1237 aa12.14□□□□□ -0.47
C4orf3-201ENST00000399075 TP73O15350 636 aa12.14□□□□□ -0.47
C4orf3-201ENST00000399075 CHN1P15882 459 aa12.14□□□□□ -0.47
C4orf3-201ENST00000399075 FGFR4P22455 802 aa12.14□□□□□ -0.47
C4orf3-201ENST00000399075 SOX10P56693 466 aa12.14□□□□□ -0.47
C4orf3-201ENST00000399075 KRT17Q04695 432 aa12.14□□□□□ -0.47
C4orf3-201ENST00000399075 RNF187Q5TA31 235 aaPredicted RBP12.14□□□□□ -0.47
C4orf3-201ENST00000399075 MON1BQ7L1V2 547 aa12.14□□□□□ -0.47
C4orf3-201ENST00000399075 WNK4Q96J92 1243 aa12.14□□□□□ -0.47
C4orf3-201ENST00000399075 VCPIP1Q96JH7 1222 aa12.14□□□□□ -0.47
C4orf3-201ENST00000399075 CABS1Q96KC9 395 aa12.14□□□□□ -0.47
C4orf3-201ENST00000399075 SLC24A3Q9HC58 644 aa12.14□□□□□ -0.47
C4orf3-201ENST00000399075 SEPT9Q9UHD8 586 aaPredicted RBP12.14□□□□□ -0.47
C4orf3-201ENST00000399075 SPATA31C2B4DYI2 1134 aa12.13□□□□□ -0.47
C4orf3-201ENST00000399075 PPP1R12AO14974 1030 aaPredicted RBP12.13□□□□□ -0.47
C4orf3-201ENST00000399075 PSTPIP1O43586 416 aa12.13□□□□□ -0.47
C4orf3-201ENST00000399075 C4BPAP04003 597 aaKnown RBP12.13□□□□□ -0.47
C4orf3-201ENST00000399075 NSFP46459 744 aaKnown RBP12.13□□□□□ -0.47
C4orf3-201ENST00000399075 KCNJ1P48048 391 aa12.13□□□□□ -0.47
C4orf3-201ENST00000399075 LIG4P49917 911 aa12.13□□□□□ -0.47
C4orf3-201ENST00000399075 ACTR2P61160 394 aa12.13□□□□□ -0.47
C4orf3-201ENST00000399075 LACTB2Q53H82 288 aaPredicted RBP12.13□□□□□ -0.47
C4orf3-201ENST00000399075 DCAF15Q66K64 600 aa12.13□□□□□ -0.47
C4orf3-201ENST00000399075 SNRNP48Q6IEG0 339 aaKnown RBP12.13□□□□□ -0.47
C4orf3-201ENST00000399075 MIS18BP1Q6P0N0 1132 aa12.13□□□□□ -0.47
C4orf3-201ENST00000399075 TAOK1Q7L7X3 1001 aa12.13□□□□□ -0.47
C4orf3-201ENST00000399075 CPLX4Q7Z7G2 160 aa12.13□□□□□ -0.47
C4orf3-201ENST00000399075 CCDC60Q8IWA6 550 aaPredicted RBP12.13□□□□□ -0.47
C4orf3-201ENST00000399075 SCYL3Q8IZE3 742 aa12.13□□□□□ -0.47
C4orf3-201ENST00000399075 MDM1Q8TC05 714 aa12.13□□□□□ -0.47
C4orf3-201ENST00000399075 DDX27Q96GQ7 796 aaKnown RBP12.13□□□□□ -0.47
C4orf3-201ENST00000399075 SNF8Q96H20 258 aa12.13□□□□□ -0.47
C4orf3-201ENST00000399075 PI4K2AQ9BTU6 479 aa12.13□□□□□ -0.47
C4orf3-201ENST00000399075 ZNF112Q9UJU3 913 aa12.13□□□□□ -0.47
C4orf3-201ENST00000399075 ZNF214Q9UL59 606 aaPredicted RBP12.13□□□□□ -0.47
C4orf3-201ENST00000399075 ASAP2O43150 1006 aa12.13□□□□□ -0.47
C4orf3-201ENST00000399075 PROSCO94903 275 aa12.13□□□□□ -0.47
C4orf3-201ENST00000399075 GAS8O95995 478 aa12.13□□□□□ -0.47
C4orf3-201ENST00000399075 HLA-DRAP01903 254 aa12.13□□□□□ -0.47
C4orf3-201ENST00000399075 RRM1P23921 792 aa12.13□□□□□ -0.47
C4orf3-201ENST00000399075 RXRBP28702 533 aa12.13□□□□□ -0.47
C4orf3-201ENST00000399075 DSG3P32926 999 aa12.13□□□□□ -0.47
C4orf3-201ENST00000399075 AUHQ13825 339 aaKnown RBP12.13□□□□□ -0.47
C4orf3-201ENST00000399075 GNPTABQ3T906 1256 aa12.13□□□□□ -0.47
C4orf3-201ENST00000399075 FNBP1Q96RU3 617 aa12.13□□□□□ -0.47
C4orf3-201ENST00000399075 AAASQ9NRG9 546 aa12.13□□□□□ -0.47
C4orf3-201ENST00000399075 CNTN6Q9UQ52 1028 aa12.13□□□□□ -0.47
C4orf3-201ENST00000399075 UMODL1Q5DID0 1318 aa12.12□□□□□ -0.47
C4orf3-201ENST00000399075 TLDC2A0PJX2 215 aa12.12□□□□□ -0.47
C4orf3-201ENST00000399075 SUPT20HL2P0C7V6 817 aa12.12□□□□□ -0.47
C4orf3-201ENST00000399075 ACO1P21399 889 aaKnown RBP12.12□□□□□ -0.47
C4orf3-201ENST00000399075 IVDP26440 423 aa12.12□□□□□ -0.47
C4orf3-201ENST00000399075 IFI35P80217 286 aaPredicted RBP12.12□□□□□ -0.47
C4orf3-201ENST00000399075 SUPT20HL1Q3ZLR7 823 aa12.12□□□□□ -0.47
C4orf3-201ENST00000399075 LIN9Q5TKA1 542 aa12.12□□□□□ -0.47
C4orf3-201ENST00000399075 SLFN12LQ6IEE8 588 aa12.12□□□□□ -0.47
C4orf3-201ENST00000399075 ZNF280CQ8ND82 737 aa12.12□□□□□ -0.47
C4orf3-201ENST00000399075 C1orf54Q8WWF1 131 aa12.12□□□□□ -0.47
C4orf3-201ENST00000399075 JDP2Q8WYK2 163 aa12.12□□□□□ -0.47
C4orf3-201ENST00000399075 SERPINB12Q96P63 405 aa12.12□□□□□ -0.47
C4orf3-201ENST00000399075 SELENOSQ9BQE4 189 aa12.12□□□□□ -0.47
C4orf3-201ENST00000399075 DCLK3Q9C098 648 aa12.12□□□□□ -0.47
C4orf3-201ENST00000399075 H0YHG0 523 aa12.12□□□□□ -0.47
C4orf3-201ENST00000399075 SORBS3O60504 671 aa12.12□□□□□ -0.47
C4orf3-201ENST00000399075 GHRP10912 638 aa12.12□□□□□ -0.47
C4orf3-201ENST00000399075 HNRNPH1P31943 449 aaKnown RBP12.12□□□□□ -0.47
C4orf3-201ENST00000399075 PIK3CAP42336 1068 aa12.12□□□□□ -0.47
C4orf3-201ENST00000399075 SARNPP82979 210 aaKnown RBP12.12□□□□□ -0.47
C4orf3-201ENST00000399075 STRN3Q13033 797 aa12.12□□□□□ -0.47
C4orf3-201ENST00000399075 EMC2Q15006 297 aa12.12□□□□□ -0.47
C4orf3-201ENST00000399075 TDRD10Q5VZ19 366 aaKnown RBP12.12□□□□□ -0.47
C4orf3-201ENST00000399075 FBXW10Q5XX13 1052 aa12.12□□□□□ -0.47
C4orf3-201ENST00000399075 SMYD5Q6GMV2 418 aa12.12□□□□□ -0.47
C4orf3-201ENST00000399075 CCDC13Q8IYE1 715 aa12.12□□□□□ -0.47
C4orf3-201ENST00000399075 EPS8L3Q8TE67 593 aaKnown RBP12.12□□□□□ -0.47
C4orf3-201ENST00000399075 CDC42EP4Q9H3Q1 356 aaKnown RBP12.12□□□□□ -0.47
C4orf3-201ENST00000399075 MRPL47Q9HD33 250 aaKnown RBP12.12□□□□□ -0.47
C4orf3-201ENST00000399075 CYP39A1Q9NYL5 469 aa12.12□□□□□ -0.47
C4orf3-201ENST00000399075 DOCK5Q9H7D0 1870 aa12.12□□□□□ -0.47
C4orf3-201ENST00000399075 TCEA3O75764 348 aa12.12□□□□□ -0.47
C4orf3-201ENST00000399075 LDHAP00338 332 aaKnown RBP12.12□□□□□ -0.47
C4orf3-201ENST00000399075 NAMPTP43490 491 aa12.12□□□□□ -0.47
C4orf3-201ENST00000399075 KLF1Q13351 362 aaPredicted RBP12.12□□□□□ -0.47
C4orf3-201ENST00000399075 CUL2Q13617 745 aa12.12□□□□□ -0.47
C4orf3-201ENST00000399075 UBAP2Q5T6F2 1119 aaKnown RBP12.12□□□□□ -0.47
C4orf3-201ENST00000399075 KCNV1Q6PIU1 500 aa12.12□□□□□ -0.47
C4orf3-201ENST00000399075 PHF13Q86YI8 300 aaPredicted RBP12.12□□□□□ -0.47
C4orf3-201ENST00000399075 KATNAL2Q8IYT4 538 aa12.12□□□□□ -0.47
C4orf3-201ENST00000399075 ATL2Q8NHH9 583 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms