RNA–Protein interactions for RNA: ENST00000398969.7

COL13A1-203, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,267 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-203ENST00000398969 RMDN3Q96TC7 470 aa27.26■■□□□ 1.95
COL13A1-203ENST00000398969 ADGRA3Q8IWK6 1321 aa27.26■■□□□ 1.95
COL13A1-203ENST00000398969 TESPA1A2RU30 521 aaPredicted RBP27.25■■□□□ 1.95
COL13A1-203ENST00000398969 ZC3H11AO75152 810 aaKnown RBP eCLIP27.25■■□□□ 1.95
COL13A1-203ENST00000398969 DGKZQ13574 1117 aa27.25■■□□□ 1.95
COL13A1-203ENST00000398969 TRIP13Q15645 432 aaPredicted RBP27.25■■□□□ 1.95
COL13A1-203ENST00000398969 FAM228AQ86W67 206 aa27.25■■□□□ 1.95
COL13A1-203ENST00000398969 GRK7Q8WTQ7 553 aa27.25■■□□□ 1.95
COL13A1-203ENST00000398969 CPA5Q8WXQ8 436 aa27.25■■□□□ 1.95
COL13A1-203ENST00000398969 PXMP2Q9NR77 195 aa27.25■■□□□ 1.95
COL13A1-203ENST00000398969 TPX2Q9ULW0 747 aaKnown RBP27.25■■□□□ 1.95
COL13A1-203ENST00000398969 TMEM120BA0PK00 339 aa27.25■■□□□ 1.95
COL13A1-203ENST00000398969 GAS8O95995 478 aa27.25■■□□□ 1.95
COL13A1-203ENST00000398969 CREB1P16220 341 aa27.25■■□□□ 1.95
COL13A1-203ENST00000398969 LRRC14Q15048 493 aa27.25■■□□□ 1.95
COL13A1-203ENST00000398969 VSTM1Q6UX27 236 aa27.25■■□□□ 1.95
COL13A1-203ENST00000398969 TRPM8Q7Z2W7 1104 aa27.25■■□□□ 1.95
COL13A1-203ENST00000398969 PHLDB2Q86SQ0 1253 aa27.25■■□□□ 1.95
COL13A1-203ENST00000398969 LPAR1Q92633 364 aa27.25■■□□□ 1.95
COL13A1-203ENST00000398969 MOV10L1Q9BXT6 1211 aaKnown RBP27.25■■□□□ 1.95
COL13A1-203ENST00000398969 KIAA1683Q9H0B3 1180 aa27.25■■□□□ 1.95
COL13A1-203ENST00000398969 C17orf75Q9HAS0 396 aa27.25■■□□□ 1.95
COL13A1-203ENST00000398969 C1orf112Q9NSG2 853 aa27.25■■□□□ 1.95
COL13A1-203ENST00000398969 HNRNPDLO14979 420 aaKnown RBP27.24■■□□□ 1.95
COL13A1-203ENST00000398969 SNX3O60493 162 aa27.24■■□□□ 1.95
COL13A1-203ENST00000398969 MYBL1P10243 752 aa27.24■■□□□ 1.95
COL13A1-203ENST00000398969 RDXP35241 583 aaKnown RBP27.24■■□□□ 1.95
COL13A1-203ENST00000398969 GSCP56915 257 aaPredicted RBP27.24■■□□□ 1.95
COL13A1-203ENST00000398969 SAMD3Q8N6K7 520 aa27.24■■□□□ 1.95
COL13A1-203ENST00000398969 MGARPQ8TDB4 240 aa27.24■■□□□ 1.95
COL13A1-203ENST00000398969 DYDC1Q8WWB3 177 aa27.24■■□□□ 1.95
COL13A1-203ENST00000398969 FAM213AQ9BRX8 229 aa27.24■■□□□ 1.95
COL13A1-203ENST00000398969 R3HDM2Q9Y2K5 976 aaKnown RBP27.24■■□□□ 1.95
COL13A1-203ENST00000398969 SBDSQ9Y3A5 250 aaKnown RBP eCLIP27.24■■□□□ 1.95
COL13A1-203ENST00000398969 MGRN1O60291 552 aa27.24■■□□□ 1.95
COL13A1-203ENST00000398969 OAS1P00973 400 aaKnown RBP27.24■■□□□ 1.95
COL13A1-203ENST00000398969 ATF2P15336 505 aa27.24■■□□□ 1.95
COL13A1-203ENST00000398969 ATP5DP30049 168 aa27.24■■□□□ 1.95
COL13A1-203ENST00000398969 CAV1Q03135 178 aa27.24■■□□□ 1.95
COL13A1-203ENST00000398969 ENPEPQ07075 957 aa27.24■■□□□ 1.95
COL13A1-203ENST00000398969 LLGL2Q6P1M3 1020 aa27.24■■□□□ 1.95
COL13A1-203ENST00000398969 C15orf39Q6ZRI6 1047 aa27.24■■□□□ 1.95
COL13A1-203ENST00000398969 TRIM11Q96F44 468 aa27.24■■□□□ 1.95
COL13A1-203ENST00000398969 CEP170P1Q96L14 293 aa27.24■■□□□ 1.95
COL13A1-203ENST00000398969 NCAPGQ9BPX3 1015 aa27.24■■□□□ 1.95
COL13A1-203ENST00000398969 DNAJC17Q9NVM6 304 aaKnown RBP27.24■■□□□ 1.95
COL13A1-203ENST00000398969 CTNNAL1Q9UBT7 734 aa27.24■■□□□ 1.95
COL13A1-203ENST00000398969 KYNUQ16719 465 aa27.23■■□□□ 1.95
COL13A1-203ENST00000398969 ZNF677Q86XU0 584 aa27.23■■□□□ 1.95
COL13A1-203ENST00000398969 RDM1Q8NG50 284 aa27.23■■□□□ 1.95
COL13A1-203ENST00000398969 ZNF516Q92618 1163 aa27.23■■□□□ 1.95
COL13A1-203ENST00000398969 TRAIPQ9BWF2 469 aa27.23■■□□□ 1.95
COL13A1-203ENST00000398969 PCDHB2Q9Y5E7 798 aa27.23■■□□□ 1.95
COL13A1-203ENST00000398969 PCDHA10Q9Y5I2 948 aa27.23■■□□□ 1.95
COL13A1-203ENST00000398969 SORBS3O60504 671 aa27.23■■□□□ 1.95
COL13A1-203ENST00000398969 GARTP22102 1010 aa27.23■■□□□ 1.95
COL13A1-203ENST00000398969 C2CD6Q53TS8 623 aa27.23■■□□□ 1.95
COL13A1-203ENST00000398969 ATL2Q8NHH9 583 aa27.23■■□□□ 1.95
COL13A1-203ENST00000398969 ANAPC5Q9UJX4 755 aa27.23■■□□□ 1.95
COL13A1-203ENST00000398969 ADCY8P40145 1251 aa27.22■■□□□ 1.95
COL13A1-203ENST00000398969 ELF3P78545 371 aaPredicted RBP27.22■■□□□ 1.95
COL13A1-203ENST00000398969 CENPCQ03188 943 aa27.22■■□□□ 1.95
COL13A1-203ENST00000398969 PTP4A2Q12974 167 aa27.22■■□□□ 1.95
COL13A1-203ENST00000398969 BRDTQ58F21 947 aaPredicted RBP27.22■■□□□ 1.95
COL13A1-203ENST00000398969 ARHGEF16Q5VV41 709 aa27.22■■□□□ 1.95
COL13A1-203ENST00000398969 DAB2IPQ5VWQ8 1189 aa27.22■■□□□ 1.95
COL13A1-203ENST00000398969 ABCF3Q9NUQ8 709 aa27.22■■□□□ 1.95
COL13A1-203ENST00000398969 NINJ2Q9NZG7 142 aa27.22■■□□□ 1.95
COL13A1-203ENST00000398969 NEU2Q9Y3R4 380 aa27.22■■□□□ 1.95
COL13A1-203ENST00000398969 THAP12O43422 761 aa27.21■■□□□ 1.95
COL13A1-203ENST00000398969 ZNF862O60290 1169 aa27.21■■□□□ 1.95
COL13A1-203ENST00000398969 CYP1A1P04798 512 aaPredicted RBP27.21■■□□□ 1.95
COL13A1-203ENST00000398969 NSFP46459 744 aaKnown RBP27.21■■□□□ 1.95
COL13A1-203ENST00000398969 KLF1Q13351 362 aaPredicted RBP27.21■■□□□ 1.95
COL13A1-203ENST00000398969 PREPLQ4J6C6 727 aaPredicted RBP27.21■■□□□ 1.95
COL13A1-203ENST00000398969 ANGEL2Q5VTE6 544 aaKnown RBP27.21■■□□□ 1.95
COL13A1-203ENST00000398969 MAGEC3Q8TD91 643 aa27.21■■□□□ 1.95
COL13A1-203ENST00000398969 GABBR1Q9UBS5 961 aa27.21■■□□□ 1.95
COL13A1-203ENST00000398969 UMODL1Q5DID0 1318 aa27.21■■□□□ 1.95
COL13A1-203ENST00000398969 TCP11X1B4DZS4 312 aa27.21■■□□□ 1.95
COL13A1-203ENST00000398969 TCEA3O75764 348 aa27.21■■□□□ 1.95
COL13A1-203ENST00000398969 PROSCO94903 275 aa27.21■■□□□ 1.95
COL13A1-203ENST00000398969 STBD1O95210 358 aa27.21■■□□□ 1.95
COL13A1-203ENST00000398969 RALAP11233 206 aa27.21■■□□□ 1.95
COL13A1-203ENST00000398969 MON1BQ7L1V2 547 aa27.21■■□□□ 1.95
COL13A1-203ENST00000398969 DHX30Q7L2E3 1194 aaKnown RBP eCLIP27.21■■□□□ 1.95
COL13A1-203ENST00000398969 SCLT1Q96NL6 688 aa27.21■■□□□ 1.95
COL13A1-203ENST00000398969 HEMGNQ9BXL5 484 aa27.21■■□□□ 1.95
COL13A1-203ENST00000398969 FGFR1OP2Q9NVK5 253 aa27.21■■□□□ 1.95
COL13A1-203ENST00000398969 FOXO6A8MYZ6 492 aa27.2■■□□□ 1.95
COL13A1-203ENST00000398969 FAM133BQ5BKY9 247 aaKnown RBP27.2■■□□□ 1.95
COL13A1-203ENST00000398969 DCAF15Q66K64 600 aa27.2■■□□□ 1.95
COL13A1-203ENST00000398969 TAS1R3Q7RTX0 852 aa27.2■■□□□ 1.95
COL13A1-203ENST00000398969 TRPM4Q8TD43 1214 aa27.2■■□□□ 1.95
COL13A1-203ENST00000398969 BICD1Q96G01 975 aa27.2■■□□□ 1.95
COL13A1-203ENST00000398969 PWWP2AQ96N64 755 aa27.2■■□□□ 1.95
COL13A1-203ENST00000398969 SENP7Q9BQF6 1050 aa27.2■■□□□ 1.95
COL13A1-203ENST00000398969 USP15Q9Y4E8 981 aaPredicted RBP27.2■■□□□ 1.95
COL13A1-203ENST00000398969 O00370 1275 aa27.2■■□□□ 1.94
COL13A1-203ENST00000398969 VPS41P49754 854 aa27.2■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms