RNA–Protein interactions for RNA: ENST00000398741.5

PRAME-201, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRAME, Length 2,202 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-201ENST00000398741 ANAPC5Q9UJX4 755 aa13.96□□□□□ -0.17
PRAME-201ENST00000398741 TMEM120BA0PK00 339 aa13.96□□□□□ -0.17
PRAME-201ENST00000398741 TTC4O95801 387 aa13.96□□□□□ -0.17
PRAME-201ENST00000398741 GSTA1P08263 222 aa13.96□□□□□ -0.17
PRAME-201ENST00000398741 CCND2P30279 289 aa13.96□□□□□ -0.17
PRAME-201ENST00000398741 CENPCQ03188 943 aa13.96□□□□□ -0.17
PRAME-201ENST00000398741 ENPEPQ07075 957 aa13.96□□□□□ -0.17
PRAME-201ENST00000398741 LRRC14Q15048 493 aa13.96□□□□□ -0.17
PRAME-201ENST00000398741 ZNF568Q3ZCX4 644 aa13.96□□□□□ -0.17
PRAME-201ENST00000398741 BRDTQ58F21 947 aaPredicted RBP13.96□□□□□ -0.17
PRAME-201ENST00000398741 LIN9Q5TKA1 542 aa13.96□□□□□ -0.17
PRAME-201ENST00000398741 RHBDF2Q6PJF5 856 aa13.96□□□□□ -0.17
PRAME-201ENST00000398741 MCPH1Q8NEM0 835 aa13.96□□□□□ -0.17
PRAME-201ENST00000398741 YY1AP1Q9H869 796 aa13.96□□□□□ -0.17
PRAME-201ENST00000398741 KCNK9Q9NPC2 374 aa13.96□□□□□ -0.17
PRAME-201ENST00000398741 DGAT1O75907 488 aa13.95□□□□□ -0.18
PRAME-201ENST00000398741 POTEJP0CG39 1038 aa13.95□□□□□ -0.18
PRAME-201ENST00000398741 TNNI1P19237 187 aa13.95□□□□□ -0.18
PRAME-201ENST00000398741 PIK3CAP42336 1068 aa13.95□□□□□ -0.18
PRAME-201ENST00000398741 VPS41P49754 854 aa13.95□□□□□ -0.18
PRAME-201ENST00000398741 LIG4P49917 911 aa13.95□□□□□ -0.18
PRAME-201ENST00000398741 MAP3K10Q02779 954 aa13.95□□□□□ -0.18
PRAME-201ENST00000398741 KYNUQ16719 465 aa13.95□□□□□ -0.18
PRAME-201ENST00000398741 LMBRD2Q68DH5 695 aaPredicted RBP13.95□□□□□ -0.18
PRAME-201ENST00000398741 ZNF365Q70YC5 407 aa13.95□□□□□ -0.18
PRAME-201ENST00000398741 TRPM8Q7Z2W7 1104 aa13.95□□□□□ -0.18
PRAME-201ENST00000398741 ANKRD42Q8N9B4 389 aa13.95□□□□□ -0.18
PRAME-201ENST00000398741 MTMR14Q8NCE2 650 aa13.95□□□□□ -0.18
PRAME-201ENST00000398741 ZKSCAN4Q969J2 545 aaPredicted RBP13.95□□□□□ -0.18
PRAME-201ENST00000398741 HEMGNQ9BXL5 484 aa13.95□□□□□ -0.18
PRAME-201ENST00000398741 SEPT9Q9UHD8 586 aaPredicted RBP13.95□□□□□ -0.18
PRAME-201ENST00000398741 CD2APQ9Y5K6 639 aa13.95□□□□□ -0.18
PRAME-201ENST00000398741 MYPNQ86TC9 1320 aa13.95□□□□□ -0.18
PRAME-201ENST00000398741 ADGRA3Q8IWK6 1321 aa13.95□□□□□ -0.18
PRAME-201ENST00000398741 H0YCG3 227 aa13.95□□□□□ -0.18
PRAME-201ENST00000398741 TP73O15350 636 aa13.95□□□□□ -0.18
PRAME-201ENST00000398741 SORBS3O60504 671 aa13.95□□□□□ -0.18
PRAME-201ENST00000398741 RALAP11233 206 aa13.95□□□□□ -0.18
PRAME-201ENST00000398741 NBPF9Q3BBW0 867 aa13.95□□□□□ -0.18
PRAME-201ENST00000398741 C2CD6Q53TS8 623 aa13.95□□□□□ -0.18
PRAME-201ENST00000398741 XRRA1Q6P2D8 792 aa13.95□□□□□ -0.18
PRAME-201ENST00000398741 BBOF1Q8ND07 529 aa13.95□□□□□ -0.18
PRAME-201ENST00000398741 AGBL3Q8NEM8 1001 aa13.95□□□□□ -0.18
PRAME-201ENST00000398741 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.95□□□□□ -0.18
PRAME-201ENST00000398741 GPRASP2Q96D09 838 aa13.95□□□□□ -0.18
PRAME-201ENST00000398741 DDX27Q96GQ7 796 aaKnown RBP13.95□□□□□ -0.18
PRAME-201ENST00000398741 FAM84AQ96KN4 292 aa13.95□□□□□ -0.18
PRAME-201ENST00000398741 ATP6V0A4Q9HBG4 840 aa13.95□□□□□ -0.18
PRAME-201ENST00000398741 PGAP2Q9UHJ9 254 aa13.95□□□□□ -0.18
PRAME-201ENST00000398741 SCAF8Q9UPN6 1271 aaKnown RBP13.95□□□□□ -0.18
PRAME-201ENST00000398741 TCP11X1B4DZS4 312 aa13.94□□□□□ -0.18
PRAME-201ENST00000398741 WNT10BO00744 389 aa13.94□□□□□ -0.18
PRAME-201ENST00000398741 PSTPIP1O43586 416 aa13.94□□□□□ -0.18
PRAME-201ENST00000398741 EXTL3O43909 919 aa13.94□□□□□ -0.18
PRAME-201ENST00000398741 PROSCO94903 275 aa13.94□□□□□ -0.18
PRAME-201ENST00000398741 PSAPP07602 524 aa13.94□□□□□ -0.18
PRAME-201ENST00000398741 GJC1P36383 396 aa13.94□□□□□ -0.18
PRAME-201ENST00000398741 SSR1P43307 286 aaKnown RBP13.94□□□□□ -0.18
PRAME-201ENST00000398741 SP4Q02446 784 aa13.94□□□□□ -0.18
PRAME-201ENST00000398741 BAATQ14032 418 aaPredicted RBP13.94□□□□□ -0.18
PRAME-201ENST00000398741 SWSAP1Q6NVH7 229 aa13.94□□□□□ -0.18
PRAME-201ENST00000398741 LLGL2Q6P1M3 1020 aa13.94□□□□□ -0.18
PRAME-201ENST00000398741 RHOT1Q8IXI2 618 aa13.94□□□□□ -0.18
PRAME-201ENST00000398741 PLCD3Q8N3E9 789 aa13.94□□□□□ -0.18
PRAME-201ENST00000398741 CCDC63Q8NA47 563 aa13.94□□□□□ -0.18
PRAME-201ENST00000398741 SENP7Q9BQF6 1050 aa13.94□□□□□ -0.18
PRAME-201ENST00000398741 C11orf70Q9BRQ4 267 aa13.94□□□□□ -0.18
PRAME-201ENST00000398741 HERPUD2Q9BSE4 406 aa13.94□□□□□ -0.18
PRAME-201ENST00000398741 RPAP3Q9H6T3 665 aaPredicted RBP13.94□□□□□ -0.18
PRAME-201ENST00000398741 KIAA1586Q9HCI6 787 aa13.94□□□□□ -0.18
PRAME-201ENST00000398741 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.94□□□□□ -0.18
PRAME-201ENST00000398741 CTNNAL1Q9UBT7 734 aa13.94□□□□□ -0.18
PRAME-201ENST00000398741 SLC12A4Q9UP95 1085 aa13.94□□□□□ -0.18
PRAME-201ENST00000398741 R3HDM2Q9Y2K5 976 aaKnown RBP13.94□□□□□ -0.18
PRAME-201ENST00000398741 COL4A5P29400 1685 aa13.94□□□□□ -0.18
PRAME-201ENST00000398741 ZNF862O60290 1169 aa13.94□□□□□ -0.18
PRAME-201ENST00000398741 SNX3O60493 162 aa13.94□□□□□ -0.18
PRAME-201ENST00000398741 HLA-DRAP01903 254 aa13.94□□□□□ -0.18
PRAME-201ENST00000398741 CYP1A1P04798 512 aaPredicted RBP13.94□□□□□ -0.18
PRAME-201ENST00000398741 NR3C2P08235 984 aa13.94□□□□□ -0.18
PRAME-201ENST00000398741 IVDP26440 423 aa13.94□□□□□ -0.18
PRAME-201ENST00000398741 ABCD1P33897 745 aa13.94□□□□□ -0.18
PRAME-201ENST00000398741 RTP1P59025 263 aa13.94□□□□□ -0.18
PRAME-201ENST00000398741 PTP4A2Q12974 167 aa13.94□□□□□ -0.18
PRAME-201ENST00000398741 MTMR2Q13614 643 aa13.94□□□□□ -0.18
PRAME-201ENST00000398741 FAM133BQ5BKY9 247 aaKnown RBP13.94□□□□□ -0.18
PRAME-201ENST00000398741 HIBCHQ6NVY1 386 aaPredicted RBP13.94□□□□□ -0.18
PRAME-201ENST00000398741 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.94□□□□□ -0.18
PRAME-201ENST00000398741 CCDC89Q8N998 374 aa13.94□□□□□ -0.18
PRAME-201ENST00000398741 ZNF516Q92618 1163 aa13.94□□□□□ -0.18
PRAME-201ENST00000398741 CCDC77Q9BR77 488 aa13.94□□□□□ -0.18
PRAME-201ENST00000398741 POLR3FQ9H1D9 316 aaPredicted RBP13.94□□□□□ -0.18
PRAME-201ENST00000398741 MRPL47Q9HD33 250 aaKnown RBP13.94□□□□□ -0.18
PRAME-201ENST00000398741 RNF146Q9NTX7 359 aa13.94□□□□□ -0.18
PRAME-201ENST00000398741 NINJ2Q9NZG7 142 aa13.94□□□□□ -0.18
PRAME-201ENST00000398741 PIM2Q9P1W9 311 aa13.94□□□□□ -0.18
PRAME-201ENST00000398741 USP15Q9Y4E8 981 aaPredicted RBP13.94□□□□□ -0.18
PRAME-201ENST00000398741 GSTTP1A0A1W2PQM5 241 aa13.93□□□□□ -0.18
PRAME-201ENST00000398741 MAFGO15525 162 aa13.93□□□□□ -0.18
PRAME-201ENST00000398741 BRAFP15056 766 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms