RNA–Protein interactions for RNA: ENST00000398738.2

PTCHD4-202, Transcript of patched domain containing 4, humanhuman

TSL 1 (best)

Gene PTCHD4, Length 3,232 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-202ENST00000398738 ZNF564Q8TBZ8 553 aaPredicted RBP10.52□□□□□ -0.73
PTCHD4-202ENST00000398738 DNAJC9Q8WXX5 260 aa10.52□□□□□ -0.73
PTCHD4-202ENST00000398738 CCDC127Q96BQ5 260 aa10.52□□□□□ -0.73
PTCHD4-202ENST00000398738 PCDHB18PQ96TA0 734 aa10.52□□□□□ -0.73
PTCHD4-202ENST00000398738 KLF6Q99612 283 aaPredicted RBP10.52□□□□□ -0.73
PTCHD4-202ENST00000398738 RTFDC1Q9BY42 306 aaPredicted RBP10.52□□□□□ -0.73
PTCHD4-202ENST00000398738 DENND2DQ9H6A0 471 aaPredicted RBP10.52□□□□□ -0.73
PTCHD4-202ENST00000398738 CCDC134Q9H6E4 229 aa10.52□□□□□ -0.73
PTCHD4-202ENST00000398738 UBN1Q9NPG3 1134 aa10.52□□□□□ -0.73
PTCHD4-202ENST00000398738 RGS17Q9UGC6 210 aaPredicted RBP10.52□□□□□ -0.73
PTCHD4-202ENST00000398738 USTQ9Y2C2 406 aa10.52□□□□□ -0.73
PTCHD4-202ENST00000398738 EMSYQ7Z589 1322 aa10.52□□□□□ -0.73
PTCHD4-202ENST00000398738 PITPNM2Q9BZ72 1349 aa10.52□□□□□ -0.73
PTCHD4-202ENST00000398738 FAM86B1E9PN63 330 aa10.52□□□□□ -0.73
PTCHD4-202ENST00000398738 ZBTB5O15062 677 aa10.52□□□□□ -0.73
PTCHD4-202ENST00000398738 TTC4O95801 387 aa10.52□□□□□ -0.73
PTCHD4-202ENST00000398738 TTLL1O95922 423 aa10.52□□□□□ -0.73
PTCHD4-202ENST00000398738 FAM86B2P0C5J1 330 aa10.52□□□□□ -0.73
PTCHD4-202ENST00000398738 TPBGLP0DKB5 382 aa10.52□□□□□ -0.73
PTCHD4-202ENST00000398738 ATF2P15336 505 aa10.52□□□□□ -0.73
PTCHD4-202ENST00000398738 CA4P22748 312 aa10.52□□□□□ -0.73
PTCHD4-202ENST00000398738 DRG2P55039 364 aaKnown RBP10.52□□□□□ -0.73
PTCHD4-202ENST00000398738 WDR4P57081 412 aaKnown RBP10.52□□□□□ -0.73
PTCHD4-202ENST00000398738 ZNF543Q08ER8 600 aa10.52□□□□□ -0.73
PTCHD4-202ENST00000398738 STRN3Q13033 797 aa10.52□□□□□ -0.73
PTCHD4-202ENST00000398738 ASPRV1Q53RT3 343 aa10.52□□□□□ -0.73
PTCHD4-202ENST00000398738 TAF1BQ53T94 588 aaPredicted RBP10.52□□□□□ -0.73
PTCHD4-202ENST00000398738 RHOT2Q8IXI1 618 aa10.52□□□□□ -0.73
PTCHD4-202ENST00000398738 SYT2Q8N9I0 419 aaPredicted RBP10.52□□□□□ -0.73
PTCHD4-202ENST00000398738 ZSWIM2Q8NEG5 633 aa10.52□□□□□ -0.73
PTCHD4-202ENST00000398738 P2RX7Q99572 595 aaKnown RBP10.52□□□□□ -0.73
PTCHD4-202ENST00000398738 GPR88Q9GZN0 384 aa10.52□□□□□ -0.73
PTCHD4-202ENST00000398738 KLHL11Q9NVR0 708 aa10.52□□□□□ -0.73
PTCHD4-202ENST00000398738 PCYOX1Q9UHG3 505 aa10.52□□□□□ -0.73
PTCHD4-202ENST00000398738 G3BP2Q9UN86 482 aaKnown RBP10.52□□□□□ -0.73
PTCHD4-202ENST00000398738 DIS3Q9Y2L1 958 aaKnown RBP10.52□□□□□ -0.73
PTCHD4-202ENST00000398738 CFAP69A5D8W1 941 aa10.51□□□□□ -0.73
PTCHD4-202ENST00000398738 GOLGA8SH3BPF8 625 aa10.51□□□□□ -0.73
PTCHD4-202ENST00000398738 GOLGA8MH3BSY2 632 aa10.51□□□□□ -0.73
PTCHD4-202ENST00000398738 ATP5DP30049 168 aa10.51□□□□□ -0.73
PTCHD4-202ENST00000398738 PEX5P50542 639 aa10.51□□□□□ -0.73
PTCHD4-202ENST00000398738 KLC1Q07866 573 aa10.51□□□□□ -0.73
PTCHD4-202ENST00000398738 MTFR1Q15390 333 aa10.51□□□□□ -0.73
PTCHD4-202ENST00000398738 TSNAXIP1Q2TAA8 658 aa10.51□□□□□ -0.73
PTCHD4-202ENST00000398738 KAZNQ674X7 775 aa10.51□□□□□ -0.73
PTCHD4-202ENST00000398738 CROCCP2Q86T23 111 aa10.51□□□□□ -0.73
PTCHD4-202ENST00000398738 SLC47A2Q86VL8 602 aa10.51□□□□□ -0.73
PTCHD4-202ENST00000398738 SCYL3Q8IZE3 742 aa10.51□□□□□ -0.73
PTCHD4-202ENST00000398738 SERPINB12Q96P63 405 aa10.51□□□□□ -0.73
PTCHD4-202ENST00000398738 KRTAP3-3Q9BYR6 98 aa10.51□□□□□ -0.73
PTCHD4-202ENST00000398738 KRTAP3-2Q9BYR7 98 aa10.51□□□□□ -0.73
PTCHD4-202ENST00000398738 ETAA1Q9NY74 926 aa10.51□□□□□ -0.73
PTCHD4-202ENST00000398738 NINJ2Q9NZG7 142 aa10.51□□□□□ -0.73
PTCHD4-202ENST00000398738 ZBTB21Q9ULJ3 1066 aa10.51□□□□□ -0.73
PTCHD4-202ENST00000398738 NENFQ9UMX5 172 aa10.51□□□□□ -0.73
PTCHD4-202ENST00000398738 A0A0G2JND7 137 aa10.51□□□□□ -0.73
PTCHD4-202ENST00000398738 EXOC1LA0A1B0GW35 172 aa10.51□□□□□ -0.73
PTCHD4-202ENST00000398738 MIF4GDA9UHW6 222 aaKnown RBP10.51□□□□□ -0.73
PTCHD4-202ENST00000398738 UBTFL6P0CB48 400 aaPredicted RBP10.51□□□□□ -0.73
PTCHD4-202ENST00000398738 ZCCHC18P0CG32 403 aa10.51□□□□□ -0.73
PTCHD4-202ENST00000398738 PECAM1P16284 738 aaPredicted RBP10.51□□□□□ -0.73
PTCHD4-202ENST00000398738 SCNN1DP51172 638 aa10.51□□□□□ -0.73
PTCHD4-202ENST00000398738 RWDD2BP57060 319 aa10.51□□□□□ -0.73
PTCHD4-202ENST00000398738 TCP10Q12799 353 aa10.51□□□□□ -0.73
PTCHD4-202ENST00000398738 ORC2Q13416 577 aaPredicted RBP10.51□□□□□ -0.73
PTCHD4-202ENST00000398738 C11orf91Q3C1V1 193 aa10.51□□□□□ -0.73
PTCHD4-202ENST00000398738 KHDC1Q4VXA5 237 aaKnown RBP10.51□□□□□ -0.73
PTCHD4-202ENST00000398738 ZNF365Q70YC5 407 aa10.51□□□□□ -0.73
PTCHD4-202ENST00000398738 TRMT10CQ7L0Y3 403 aaKnown RBP10.51□□□□□ -0.73
PTCHD4-202ENST00000398738 MTDHQ86UE4 582 aaKnown RBP10.51□□□□□ -0.73
PTCHD4-202ENST00000398738 OLIG1Q8TAK6 271 aa10.51□□□□□ -0.73
PTCHD4-202ENST00000398738 EIF2AK1Q9BQI3 630 aaKnown RBP10.51□□□□□ -0.73
PTCHD4-202ENST00000398738 MKNK1Q9BUB5 465 aa10.51□□□□□ -0.73
PTCHD4-202ENST00000398738 VPS37BQ9H9H4 285 aa10.51□□□□□ -0.73
PTCHD4-202ENST00000398738 R3HDM2Q9Y2K5 976 aaKnown RBP10.51□□□□□ -0.73
PTCHD4-202ENST00000398738 PCDHA3Q9Y5H8 950 aa10.51□□□□□ -0.73
PTCHD4-202ENST00000398738 NCANO14594 1321 aa10.51□□□□□ -0.73
PTCHD4-202ENST00000398738 A6NHS1 94 aa10.5□□□□□ -0.73
PTCHD4-202ENST00000398738 MAPK13O15264 365 aa10.5□□□□□ -0.73
PTCHD4-202ENST00000398738 PRMT3O60678 531 aa10.5□□□□□ -0.73
PTCHD4-202ENST00000398738 UFL1O94874 794 aa10.5□□□□□ -0.73
PTCHD4-202ENST00000398738 BCRP11274 1271 aa10.5□□□□□ -0.73
PTCHD4-202ENST00000398738 EEF2P13639 858 aaKnown RBP10.5□□□□□ -0.73
PTCHD4-202ENST00000398738 CTNNA2P26232 953 aa10.5□□□□□ -0.73
PTCHD4-202ENST00000398738 CPA2P48052 419 aa10.5□□□□□ -0.73
PTCHD4-202ENST00000398738 CACNB3P54284 484 aa10.5□□□□□ -0.73
PTCHD4-202ENST00000398738 ZBTB16Q05516 673 aa10.5□□□□□ -0.73
PTCHD4-202ENST00000398738 SEPT7Q16181 437 aaKnown RBP10.5□□□□□ -0.73
PTCHD4-202ENST00000398738 RINT1Q6NUQ1 792 aa10.5□□□□□ -0.73
PTCHD4-202ENST00000398738 LRRC8CQ8TDW0 803 aa10.5□□□□□ -0.73
PTCHD4-202ENST00000398738 MAGEB18Q96M61 343 aa10.5□□□□□ -0.73
PTCHD4-202ENST00000398738 HERPUD2Q9BSE4 406 aa10.5□□□□□ -0.73
PTCHD4-202ENST00000398738 SLC4A5Q9BY07 1137 aa10.5□□□□□ -0.73
PTCHD4-202ENST00000398738 ROPN1BQ9BZX4 212 aaPredicted RBP10.5□□□□□ -0.73
PTCHD4-202ENST00000398738 ROPN1Q9HAT0 212 aaPredicted RBP10.5□□□□□ -0.73
PTCHD4-202ENST00000398738 CYP39A1Q9NYL5 469 aa10.5□□□□□ -0.73
PTCHD4-202ENST00000398738 ALDH3A1P30838 453 aa10.5□□□□□ -0.73
PTCHD4-202ENST00000398738 POLGP54098 1239 aaPredicted RBP10.5□□□□□ -0.73
PTCHD4-202ENST00000398738 TAGLNQ01995 201 aaKnown RBP10.5□□□□□ -0.73
PTCHD4-202ENST00000398738 RCN1Q15293 331 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms