RNA–Protein interactions for RNA: ENST00000398145.6

HPS4-202, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS4, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-202ENST00000398145 STX3Q13277 289 aa11.67□□□□□ -0.54
HPS4-202ENST00000398145 CNGA3Q16281 694 aa11.67□□□□□ -0.54
HPS4-202ENST00000398145 ATXN2LQ8WWM7 1075 aaKnown RBP11.67□□□□□ -0.54
HPS4-202ENST00000398145 ATG4AQ8WYN0 398 aa11.67□□□□□ -0.54
HPS4-202ENST00000398145 CCDC68Q9H2F9 335 aa11.67□□□□□ -0.54
HPS4-202ENST00000398145 MAGEA13PA6NCF6 341 aa11.66□□□□□ -0.54
HPS4-202ENST00000398145 MED24O75448 989 aa11.66□□□□□ -0.54
HPS4-202ENST00000398145 UBTFL6P0CB48 400 aaPredicted RBP11.66□□□□□ -0.54
HPS4-202ENST00000398145 GZMAP12544 262 aa11.66□□□□□ -0.54
HPS4-202ENST00000398145 TYK2P29597 1187 aa11.66□□□□□ -0.54
HPS4-202ENST00000398145 PPP4CP60510 307 aa11.66□□□□□ -0.54
HPS4-202ENST00000398145 THOC5Q13769 683 aaKnown RBP11.66□□□□□ -0.54
HPS4-202ENST00000398145 NKX1-1Q15270 411 aaPredicted RBP11.66□□□□□ -0.54
HPS4-202ENST00000398145 TRIP10Q15642 601 aa11.66□□□□□ -0.54
HPS4-202ENST00000398145 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.66□□□□□ -0.54
HPS4-202ENST00000398145 CXorf38Q8TB03 319 aa11.66□□□□□ -0.54
HPS4-202ENST00000398145 HIC2Q96JB3 615 aa11.66□□□□□ -0.54
HPS4-202ENST00000398145 PAPOLBQ9NRJ5 636 aaKnown RBP11.66□□□□□ -0.54
HPS4-202ENST00000398145 DAGLAQ9Y4D2 1042 aa11.66□□□□□ -0.54
HPS4-202ENST00000398145 RSPH10B2B2RC85 870 aa11.66□□□□□ -0.54
HPS4-202ENST00000398145 RIPK2O43353 540 aa11.66□□□□□ -0.54
HPS4-202ENST00000398145 HNRNPCP07910 306 aaKnown RBP eCLIP11.66□□□□□ -0.54
HPS4-202ENST00000398145 RSPH10BP0C881 870 aa11.66□□□□□ -0.54
HPS4-202ENST00000398145 NT5DC3Q86UY8 548 aa11.66□□□□□ -0.54
HPS4-202ENST00000398145 MIEF2Q96C03 454 aa11.66□□□□□ -0.54
HPS4-202ENST00000398145 SH3GL2Q99962 352 aa11.66□□□□□ -0.54
HPS4-202ENST00000398145 SH2D3AQ9BRG2 576 aa11.66□□□□□ -0.54
HPS4-202ENST00000398145 POLR3CQ9BUI4 534 aaPredicted RBP11.66□□□□□ -0.54
HPS4-202ENST00000398145 HSD3B7Q9H2F3 369 aa11.66□□□□□ -0.54
HPS4-202ENST00000398145 RPF1Q9H9Y2 349 aaKnown RBP11.66□□□□□ -0.54
HPS4-202ENST00000398145 MRPL40Q9NQ50 206 aaKnown RBP11.66□□□□□ -0.54
HPS4-202ENST00000398145 HEY2Q9UBP5 337 aa11.66□□□□□ -0.54
HPS4-202ENST00000398145 AGO2Q9UKV8 859 aaKnown RBP11.66□□□□□ -0.54
HPS4-202ENST00000398145 SPATA31D1Q6ZQQ2 1576 aa11.66□□□□□ -0.54
HPS4-202ENST00000398145 CDH6P55285 790 aa11.66□□□□□ -0.54
HPS4-202ENST00000398145 OCRLQ01968 901 aa11.66□□□□□ -0.54
HPS4-202ENST00000398145 PTK7Q13308 1070 aa11.66□□□□□ -0.54
HPS4-202ENST00000398145 PRKG1Q13976 671 aa11.66□□□□□ -0.54
HPS4-202ENST00000398145 GIT2Q14161 759 aa11.66□□□□□ -0.54
HPS4-202ENST00000398145 LMBRD2Q68DH5 695 aaPredicted RBP11.66□□□□□ -0.54
HPS4-202ENST00000398145 SESTD1Q86VW0 696 aa11.66□□□□□ -0.54
HPS4-202ENST00000398145 EXOC8Q8IYI6 725 aa11.66□□□□□ -0.54
HPS4-202ENST00000398145 CENPTQ96BT3 561 aa11.66□□□□□ -0.54
HPS4-202ENST00000398145 TIPINQ9BVW5 301 aa11.66□□□□□ -0.54
HPS4-202ENST00000398145 PXDNQ92626 1479 aa11.66□□□□□ -0.54
HPS4-202ENST00000398145 KLRC4O43908 158 aa11.66□□□□□ -0.54
HPS4-202ENST00000398145 SSTR3P32745 418 aaPredicted RBP11.66□□□□□ -0.54
HPS4-202ENST00000398145 GEMIN4P57678 1058 aaKnown RBP11.66□□□□□ -0.54
HPS4-202ENST00000398145 IGBP1P78318 339 aa11.66□□□□□ -0.54
HPS4-202ENST00000398145 SPDYCQ5MJ68 293 aa11.66□□□□□ -0.54
HPS4-202ENST00000398145 CATSPER1Q8NEC5 780 aa11.66□□□□□ -0.54
HPS4-202ENST00000398145 IPO11Q9UI26 975 aaKnown RBP11.66□□□□□ -0.54
HPS4-202ENST00000398145 BAG5Q9UL15 447 aa11.66□□□□□ -0.54
HPS4-202ENST00000398145 DIP2BQ9P265 1576 aa11.65□□□□□ -0.54
HPS4-202ENST00000398145 EPHB6O15197 1021 aa11.65□□□□□ -0.54
HPS4-202ENST00000398145 YWHABP31946 246 aaKnown RBP11.65□□□□□ -0.54
HPS4-202ENST00000398145 CPA2P48052 419 aa11.65□□□□□ -0.54
HPS4-202ENST00000398145 OVGP1Q12889 678 aa11.65□□□□□ -0.54
HPS4-202ENST00000398145 MIIPQ5JXC2 388 aa11.65□□□□□ -0.54
HPS4-202ENST00000398145 CRELD2Q6UXH1 353 aaPredicted RBP11.65□□□□□ -0.54
HPS4-202ENST00000398145 RAB44Q7Z6P3 723 aaPredicted RBP11.65□□□□□ -0.54
HPS4-202ENST00000398145 TRPV6Q9H1D0 765 aa11.65□□□□□ -0.54
HPS4-202ENST00000398145 MRPL46Q9H2W6 279 aaKnown RBP11.65□□□□□ -0.54
HPS4-202ENST00000398145 GABBR1Q9UBS5 961 aa11.65□□□□□ -0.54
HPS4-202ENST00000398145 CHMP2BQ9UQN3 213 aa11.65□□□□□ -0.54
HPS4-202ENST00000398145 IVNS1ABPQ9Y6Y0 642 aa11.65□□□□□ -0.54
HPS4-202ENST00000398145 TMEM131LA2VDJ0 1609 aa11.65□□□□□ -0.54
HPS4-202ENST00000398145 CLTCQ00610 1675 aaKnown RBP11.65□□□□□ -0.54
HPS4-202ENST00000398145 SMAPO00193 183 aa11.65□□□□□ -0.54
HPS4-202ENST00000398145 SPAG6O75602 509 aa11.65□□□□□ -0.54
HPS4-202ENST00000398145 NDUFB10O96000 172 aa11.65□□□□□ -0.54
HPS4-202ENST00000398145 MCF2P10911 925 aa11.65□□□□□ -0.54
HPS4-202ENST00000398145 SDC4P31431 198 aa11.65□□□□□ -0.54
HPS4-202ENST00000398145 ALDH5A1P51649 535 aaPredicted RBP11.65□□□□□ -0.54
HPS4-202ENST00000398145 GPSM2P81274 684 aa11.65□□□□□ -0.54
HPS4-202ENST00000398145 ERMARDQ5T6L9 678 aa11.65□□□□□ -0.54
HPS4-202ENST00000398145 PNMA5Q96PV4 448 aa11.65□□□□□ -0.54
HPS4-202ENST00000398145 TDRD3Q9H7E2 651 aaKnown RBP11.65□□□□□ -0.54
HPS4-202ENST00000398145 TMEM8AQ9HCN3 771 aa11.65□□□□□ -0.54
HPS4-202ENST00000398145 BLOC1S4Q9NUP1 217 aa11.65□□□□□ -0.54
HPS4-202ENST00000398145 ZC3H7BQ9UGR2 993 aaKnown RBP11.65□□□□□ -0.54
HPS4-202ENST00000398145 SUGT1Q9Y2Z0 365 aa11.65□□□□□ -0.54
HPS4-202ENST00000398145 GABPAQ06546 454 aa11.65□□□□□ -0.54
HPS4-202ENST00000398145 ITKQ08881 620 aa11.65□□□□□ -0.54
HPS4-202ENST00000398145 MTM1Q13496 603 aa11.65□□□□□ -0.54
HPS4-202ENST00000398145 MORF4L2Q15014 288 aa11.65□□□□□ -0.54
HPS4-202ENST00000398145 MAPK6Q16659 721 aa11.65□□□□□ -0.54
HPS4-202ENST00000398145 TEDDM1Q5T9Z0 273 aa11.65□□□□□ -0.54
HPS4-202ENST00000398145 ACAD10Q6JQN1 1059 aa11.65□□□□□ -0.54
HPS4-202ENST00000398145 PODNQ7Z5L7 613 aa11.65□□□□□ -0.54
HPS4-202ENST00000398145 IRF2BP1Q8IU81 584 aa11.65□□□□□ -0.54
HPS4-202ENST00000398145 KCNK16Q96T55 309 aa11.65□□□□□ -0.54
HPS4-202ENST00000398145 PAGR1Q9BTK6 254 aa11.65□□□□□ -0.54
HPS4-202ENST00000398145 RUSC1Q9BVN2 902 aa11.65□□□□□ -0.54
HPS4-202ENST00000398145 GCOM2Q9BZD3 368 aaPredicted RBP11.65□□□□□ -0.54
HPS4-202ENST00000398145 RAB6BQ9NRW1 208 aa11.65□□□□□ -0.54
HPS4-202ENST00000398145 ADA2Q9NZK5 511 aa11.65□□□□□ -0.54
HPS4-202ENST00000398145 NYAP2Q9P242 653 aa11.65□□□□□ -0.54
HPS4-202ENST00000398145 USP21Q9UK80 565 aa11.65□□□□□ -0.54
HPS4-202ENST00000398145 C1orf167Q5SNV9 1468 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms