RNA–Protein interactions for RNA: ENST00000398022.6

TM9SF4-202, Transcript of transmembrane 9 superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF4, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-202ENST00000398022 GPATCH4Q5T3I0 446 aaKnown RBP7□□□□□ -1.29
TM9SF4-202ENST00000398022 C6orf118Q5T5N4 469 aa7□□□□□ -1.29
TM9SF4-202ENST00000398022 MIS18BP1Q6P0N0 1132 aa7□□□□□ -1.29
TM9SF4-202ENST00000398022 C1orf228Q6PIY5 440 aa7□□□□□ -1.29
TM9SF4-202ENST00000398022 EHBP1Q8NDI1 1231 aa7□□□□□ -1.29
TM9SF4-202ENST00000398022 BARD1Q99728 777 aaKnown RBP7□□□□□ -1.29
TM9SF4-202ENST00000398022 MXD3Q9BW11 206 aa7□□□□□ -1.29
TM9SF4-202ENST00000398022 REPIN1Q9BWE0 567 aaKnown RBP7□□□□□ -1.29
TM9SF4-202ENST00000398022 ARMT1Q9H993 441 aa7□□□□□ -1.29
TM9SF4-202ENST00000398022 MRPL44Q9H9J2 332 aaKnown RBP7□□□□□ -1.29
TM9SF4-202ENST00000398022 VPS18Q9P253 973 aa7□□□□□ -1.29
TM9SF4-202ENST00000398022 LRP2BPQ9P2M1 347 aa7□□□□□ -1.29
TM9SF4-202ENST00000398022 SUCLA2Q9P2R7 463 aaPredicted RBP7□□□□□ -1.29
TM9SF4-202ENST00000398022 NFKBIL1Q9UBC1 381 aaPredicted RBP7□□□□□ -1.29
TM9SF4-202ENST00000398022 ADAM21Q9UKJ8 722 aa7□□□□□ -1.29
TM9SF4-202ENST00000398022 DSEQ9UL01 958 aa7□□□□□ -1.29
TM9SF4-202ENST00000398022 DENND2AQ9ULE3 1009 aa7□□□□□ -1.29
TM9SF4-202ENST00000398022 ITIH6Q6UXX5 1313 aa7□□□□□ -1.29
TM9SF4-202ENST00000398022 A0A0G2JPF8 293 aa7□□□□□ -1.29
TM9SF4-202ENST00000398022 GOLGA8IPA6NC78 632 aa7□□□□□ -1.29
TM9SF4-202ENST00000398022 HNRNPCL3B7ZW38 293 aa7□□□□□ -1.29
TM9SF4-202ENST00000398022 MTSS1O43312 755 aa7□□□□□ -1.29
TM9SF4-202ENST00000398022 TSPAN9O75954 239 aa7□□□□□ -1.29
TM9SF4-202ENST00000398022 SASH3O75995 380 aa7□□□□□ -1.29
TM9SF4-202ENST00000398022 APOEP02649 317 aa7□□□□□ -1.29
TM9SF4-202ENST00000398022 PDHA1P08559 390 aa7□□□□□ -1.29
TM9SF4-202ENST00000398022 FGRP09769 529 aa7□□□□□ -1.29
TM9SF4-202ENST00000398022 HNRNPCL4P0DMR1 293 aa7□□□□□ -1.29
TM9SF4-202ENST00000398022 CALM1P0DP23 149 aa7□□□□□ -1.29
TM9SF4-202ENST00000398022 CALM2P0DP24 149 aa7□□□□□ -1.29
TM9SF4-202ENST00000398022 CALM3P0DP25 149 aa7□□□□□ -1.29
TM9SF4-202ENST00000398022 TRIM23P36406 574 aa7□□□□□ -1.29
TM9SF4-202ENST00000398022 RFC5P40937 340 aa7□□□□□ -1.29
TM9SF4-202ENST00000398022 TOB1P50616 345 aaPredicted RBP7□□□□□ -1.29
TM9SF4-202ENST00000398022 NR5A1Q13285 461 aa7□□□□□ -1.29
TM9SF4-202ENST00000398022 EPHX4Q8IUS5 362 aa7□□□□□ -1.29
TM9SF4-202ENST00000398022 GRAMD1CQ8IYS0 662 aa7□□□□□ -1.29
TM9SF4-202ENST00000398022 ANKRD53Q8N9V6 530 aa7□□□□□ -1.29
TM9SF4-202ENST00000398022 UBXN6Q9BZV1 441 aa7□□□□□ -1.29
TM9SF4-202ENST00000398022 EPC1Q9H2F5 836 aa7□□□□□ -1.29
TM9SF4-202ENST00000398022 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP7□□□□□ -1.29
TM9SF4-202ENST00000398022 PDP2Q9P2J9 529 aa7□□□□□ -1.29
TM9SF4-202ENST00000398022 ADD3Q9UEY8 706 aaKnown RBP7□□□□□ -1.29
TM9SF4-202ENST00000398022 ZMIZ1Q9ULJ6 1067 aa7□□□□□ -1.29
TM9SF4-202ENST00000398022 NID2Q14112 1375 aa6.99□□□□□ -1.29
TM9SF4-202ENST00000398022 ESYT3A0FGR9 886 aa6.99□□□□□ -1.29
TM9SF4-202ENST00000398022 KRT1P04264 644 aa6.99□□□□□ -1.29
TM9SF4-202ENST00000398022 GNAT1P11488 350 aa6.99□□□□□ -1.29
TM9SF4-202ENST00000398022 HPGDP15428 266 aa6.99□□□□□ -1.29
TM9SF4-202ENST00000398022 IL32P24001 234 aa6.99□□□□□ -1.29
TM9SF4-202ENST00000398022 IDUAP35475 653 aa6.99□□□□□ -1.29
TM9SF4-202ENST00000398022 CBX5P45973 191 aa6.99□□□□□ -1.29
TM9SF4-202ENST00000398022 GTF2A2P52657 109 aa6.99□□□□□ -1.29
TM9SF4-202ENST00000398022 MYL6P60660 151 aa6.99□□□□□ -1.29
TM9SF4-202ENST00000398022 RPP38P78345 283 aaKnown RBP6.99□□□□□ -1.29
TM9SF4-202ENST00000398022 GSTM4Q03013 218 aa6.99□□□□□ -1.29
TM9SF4-202ENST00000398022 ITGB3BPQ13352 177 aaPredicted RBP6.99□□□□□ -1.29
TM9SF4-202ENST00000398022 BYSLQ13895 437 aaKnown RBP6.99□□□□□ -1.29
TM9SF4-202ENST00000398022 MLC1Q15049 377 aa6.99□□□□□ -1.29
TM9SF4-202ENST00000398022 Q3ZCU0 254 aa6.99□□□□□ -1.29
TM9SF4-202ENST00000398022 ARSHQ5FYA8 562 aa6.99□□□□□ -1.29
TM9SF4-202ENST00000398022 RRAGBQ5VZM2 374 aa6.99□□□□□ -1.29
TM9SF4-202ENST00000398022 PLEKHM3Q6ZWE6 761 aa6.99□□□□□ -1.29
TM9SF4-202ENST00000398022 KIAA0907Q7Z7F0 614 aaPredicted RBP6.99□□□□□ -1.29
TM9SF4-202ENST00000398022 ZKSCAN3Q9BRR0 538 aa6.99□□□□□ -1.29
TM9SF4-202ENST00000398022 MCM9Q9NXL9 1143 aa6.99□□□□□ -1.29
TM9SF4-202ENST00000398022 TEKT2Q9UIF3 430 aa6.99□□□□□ -1.29
TM9SF4-202ENST00000398022 RIC1Q4ADV7 1423 aa6.99□□□□□ -1.29
TM9SF4-202ENST00000398022 GOLGA8JA6NMD2 632 aa6.99□□□□□ -1.29
TM9SF4-202ENST00000398022 GOLGA8TH3BQL2 631 aa6.99□□□□□ -1.29
TM9SF4-202ENST00000398022 BIRC5O15392 142 aa6.99□□□□□ -1.29
TM9SF4-202ENST00000398022 LZTS3O60299 673 aaPredicted RBP6.99□□□□□ -1.29
TM9SF4-202ENST00000398022 GOLGA8HP0CJ92 632 aa6.99□□□□□ -1.29
TM9SF4-202ENST00000398022 FUT4P22083 530 aa6.99□□□□□ -1.29
TM9SF4-202ENST00000398022 CASP14P31944 242 aa6.99□□□□□ -1.29
TM9SF4-202ENST00000398022 BCAMP50895 628 aa6.99□□□□□ -1.29
TM9SF4-202ENST00000398022 PPP2R5DQ14738 602 aa6.99□□□□□ -1.29
TM9SF4-202ENST00000398022 PABPC1LQ4VXU2 614 aaKnown RBP6.99□□□□□ -1.29
TM9SF4-202ENST00000398022 KRBOX4Q5JUW0 171 aa6.99□□□□□ -1.29
TM9SF4-202ENST00000398022 LIN54Q6MZP7 749 aa6.99□□□□□ -1.29
TM9SF4-202ENST00000398022 DNAJC10Q8IXB1 793 aa6.99□□□□□ -1.29
TM9SF4-202ENST00000398022 SPATA20Q8TB22 786 aa6.99□□□□□ -1.29
TM9SF4-202ENST00000398022 PAGE5Q96GU1 130 aa6.99□□□□□ -1.29
TM9SF4-202ENST00000398022 C8orf4Q9NR00 106 aa6.99□□□□□ -1.29
TM9SF4-202ENST00000398022 CLEC4AQ9UMR7 237 aa6.99□□□□□ -1.29
TM9SF4-202ENST00000398022 CTNND2Q9UQB3 1225 aa6.99□□□□□ -1.29
TM9SF4-202ENST00000398022 C15orf41Q9Y2V0 281 aa6.99□□□□□ -1.29
TM9SF4-202ENST00000398022 SLC4A7Q9Y6M7 1214 aa6.99□□□□□ -1.29
TM9SF4-202ENST00000398022 LOC105371267A0A1B0GV96 52 aa6.99□□□□□ -1.29
TM9SF4-202ENST00000398022 SERTM1A2A2V5 107 aa6.99□□□□□ -1.29
TM9SF4-202ENST00000398022 FRMD3A2A2Y4 597 aa6.99□□□□□ -1.29
TM9SF4-202ENST00000398022 MINDY4BA8MYZ0 360 aa6.99□□□□□ -1.29
TM9SF4-202ENST00000398022 EBAG9O00559 213 aa6.99□□□□□ -1.29
TM9SF4-202ENST00000398022 TEX33O43247 280 aa6.99□□□□□ -1.29
TM9SF4-202ENST00000398022 ITGB1P05556 798 aa6.99□□□□□ -1.29
TM9SF4-202ENST00000398022 TM4SF1P30408 202 aa6.99□□□□□ -1.29
TM9SF4-202ENST00000398022 GUCY1A2P33402 732 aa6.99□□□□□ -1.29
TM9SF4-202ENST00000398022 ST5P78524 1137 aa6.99□□□□□ -1.29
TM9SF4-202ENST00000398022 PAK1Q13153 545 aa6.99□□□□□ -1.29
TM9SF4-202ENST00000398022 MTF1Q14872 753 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms