RNA–Protein interactions for RNA: ENST00000397109.7

SEC13-208, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best) BASIC

Gene SEC13, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-208ENST00000397109 STYXL1Q9Y6J8 313 aa15.85■□□□□ 0.13
SEC13-208ENST00000397109 PODXLO00592 558 aa15.84■□□□□ 0.13
SEC13-208ENST00000397109 POLR2DO15514 142 aaKnown RBP15.84■□□□□ 0.13
SEC13-208ENST00000397109 GCNT3O95395 438 aa15.84■□□□□ 0.13
SEC13-208ENST00000397109 ADRB2P07550 413 aa15.84■□□□□ 0.13
SEC13-208ENST00000397109 FGFR3P22607 806 aa15.84■□□□□ 0.13
SEC13-208ENST00000397109 MRE11P49959 708 aa15.84■□□□□ 0.13
SEC13-208ENST00000397109 POU5F1Q01860 360 aaKnown RBP15.84■□□□□ 0.13
SEC13-208ENST00000397109 SOX4Q06945 474 aaPredicted RBP15.84■□□□□ 0.13
SEC13-208ENST00000397109 RTP2Q5QGT7 225 aa15.84■□□□□ 0.13
SEC13-208ENST00000397109 RESP18Q5W5W9 173 aa15.84■□□□□ 0.13
SEC13-208ENST00000397109 CNNM4Q6P4Q7 775 aa15.84■□□□□ 0.13
SEC13-208ENST00000397109 SLC39A4Q6P5W5 647 aa15.84■□□□□ 0.13
SEC13-208ENST00000397109 STXBP4Q6ZWJ1 553 aa15.84■□□□□ 0.13
SEC13-208ENST00000397109 B3GALT6Q96L58 329 aa15.84■□□□□ 0.13
SEC13-208ENST00000397109 C1QTNF1Q9BXJ1 281 aa15.84■□□□□ 0.13
SEC13-208ENST00000397109 TRIM9Q9C026 710 aa15.84■□□□□ 0.13
SEC13-208ENST00000397109 PLEKHA4Q9H4M7 779 aa15.84■□□□□ 0.13
SEC13-208ENST00000397109 TBC1D7Q9P0N9 293 aa15.84■□□□□ 0.13
SEC13-208ENST00000397109 FAM237AA0A1B0GTK4 181 aa15.84■□□□□ 0.13
SEC13-208ENST00000397109 LOC730098B7Z3J9 87 aa15.84■□□□□ 0.13
SEC13-208ENST00000397109 ANKRD63C9JTQ0 380 aa15.84■□□□□ 0.13
SEC13-208ENST00000397109 PI4K2BG5E9Z4 385 aa15.84■□□□□ 0.13
SEC13-208ENST00000397109 MEFVO15553 781 aaPredicted RBP15.84■□□□□ 0.13
SEC13-208ENST00000397109 FAM189A1O60320 539 aa15.84■□□□□ 0.13
SEC13-208ENST00000397109 ALADP13716 330 aa15.84■□□□□ 0.13
SEC13-208ENST00000397109 CYP3A5P20815 502 aa15.84■□□□□ 0.13
SEC13-208ENST00000397109 CMA1P23946 247 aa15.84■□□□□ 0.13
SEC13-208ENST00000397109 TNFSF9P41273 254 aa15.84■□□□□ 0.13
SEC13-208ENST00000397109 ENOX2Q16206 610 aaKnown RBP15.84■□□□□ 0.13
SEC13-208ENST00000397109 PSMD5Q16401 504 aa15.84■□□□□ 0.13
SEC13-208ENST00000397109 CYP26C1Q6V0L0 522 aa15.84■□□□□ 0.13
SEC13-208ENST00000397109 C15orf39Q6ZRI6 1047 aa15.84■□□□□ 0.13
SEC13-208ENST00000397109 C12orf76Q8N812 135 aaPredicted RBP15.84■□□□□ 0.13
SEC13-208ENST00000397109 CMASQ8NFW8 434 aaPredicted RBP15.84■□□□□ 0.13
SEC13-208ENST00000397109 LNX1Q8TBB1 728 aaPredicted RBP15.84■□□□□ 0.13
SEC13-208ENST00000397109 STAMQ92783 540 aa15.84■□□□□ 0.13
SEC13-208ENST00000397109 C18orf25Q96B23 403 aaPredicted RBP15.84■□□□□ 0.13
SEC13-208ENST00000397109 KIF12Q96FN5 646 aa15.84■□□□□ 0.13
SEC13-208ENST00000397109 GZF1Q9H116 711 aaPredicted RBP15.84■□□□□ 0.13
SEC13-208ENST00000397109 MAN1C1Q9NR34 630 aa15.84■□□□□ 0.13
SEC13-208ENST00000397109 CPSF3Q9UKF6 684 aaKnown RBP15.84■□□□□ 0.13
SEC13-208ENST00000397109 AGO2Q9UKV8 859 aaKnown RBP15.84■□□□□ 0.13
SEC13-208ENST00000397109 UBQLN1Q9UMX0 589 aaKnown RBP15.84■□□□□ 0.13
SEC13-208ENST00000397109 NR2E1Q9Y466 385 aa15.84■□□□□ 0.13
SEC13-208ENST00000397109 NUB1Q9Y5A7 615 aa15.84■□□□□ 0.13
SEC13-208ENST00000397109 MUC3AQ02505 3323 aa15.83■□□□□ 0.12
SEC13-208ENST00000397109 PDCD11Q14690 1871 aaKnown RBP15.83■□□□□ 0.12
SEC13-208ENST00000397109 LACTBL1A8MY62 500 aa15.83■□□□□ 0.12
SEC13-208ENST00000397109 ZBTB6Q15916 424 aa15.83■□□□□ 0.12
SEC13-208ENST00000397109 LILRA6Q6PI73 481 aa15.83■□□□□ 0.12
SEC13-208ENST00000397109 PRSS55Q6UWB4 352 aaPredicted RBP15.83■□□□□ 0.12
SEC13-208ENST00000397109 CD300LGQ6UXG3 332 aa15.83■□□□□ 0.12
SEC13-208ENST00000397109 TMC5Q6UXY8 1006 aa15.83■□□□□ 0.12
SEC13-208ENST00000397109 ANKS3Q6ZW76 656 aa15.83■□□□□ 0.12
SEC13-208ENST00000397109 GPR149Q86SP6 731 aa15.83■□□□□ 0.12
SEC13-208ENST00000397109 PALB2Q86YC2 1186 aa15.83■□□□□ 0.12
SEC13-208ENST00000397109 SYCP3Q8IZU3 236 aa15.83■□□□□ 0.12
SEC13-208ENST00000397109 POMGNT1Q8WZA1 660 aa15.83■□□□□ 0.12
SEC13-208ENST00000397109 RPGRIP1Q96KN7 1286 aa15.83■□□□□ 0.12
SEC13-208ENST00000397109 C7orf25Q9BPX7 421 aa15.83■□□□□ 0.12
SEC13-208ENST00000397109 RHOBTB2Q9BYZ6 727 aa15.83■□□□□ 0.12
SEC13-208ENST00000397109 TMEM206Q9H813 350 aa15.83■□□□□ 0.12
SEC13-208ENST00000397109 KCNH3Q9ULD8 1083 aa15.83■□□□□ 0.12
SEC13-208ENST00000397109 MTCL1Q9Y4B5 1905 aaKnown RBP15.82■□□□□ 0.12
SEC13-208ENST00000397109 SYN3O14994 580 aa15.82■□□□□ 0.12
SEC13-208ENST00000397109 TGM5O43548 720 aa15.82■□□□□ 0.12
SEC13-208ENST00000397109 RPL17P18621 184 aaKnown RBP15.82■□□□□ 0.12
SEC13-208ENST00000397109 LRPAP1P30533 357 aa15.82■□□□□ 0.12
SEC13-208ENST00000397109 ASIC1P78348 528 aa15.82■□□□□ 0.12
SEC13-208ENST00000397109 ZBTB41Q5SVQ8 909 aa15.82■□□□□ 0.12
SEC13-208ENST00000397109 CAVIN1Q6NZI2 390 aaKnown RBP15.82■□□□□ 0.12
SEC13-208ENST00000397109 CEP57L1Q8IYX8 460 aa15.82■□□□□ 0.12
SEC13-208ENST00000397109 C3orf58Q8NDZ4 430 aa15.82■□□□□ 0.12
SEC13-208ENST00000397109 FAM212AQ96EL1 285 aa15.82■□□□□ 0.12
SEC13-208ENST00000397109 CLSTN3Q9BQT9 956 aa15.82■□□□□ 0.12
SEC13-208ENST00000397109 ASB7Q9H672 318 aa15.82■□□□□ 0.12
SEC13-208ENST00000397109 MTRRQ9UBK8 725 aa15.82■□□□□ 0.12
SEC13-208ENST00000397109 HPSEQ9Y251 543 aa15.82■□□□□ 0.12
SEC13-208ENST00000397109 DERAQ9Y315 318 aa15.82■□□□□ 0.12
SEC13-208ENST00000397109 BACE2Q9Y5Z0 518 aa15.82■□□□□ 0.12
SEC13-208ENST00000397109 VWA8A3KMH1 1905 aa15.81■□□□□ 0.12
SEC13-208ENST00000397109 DCXO43602 365 aa15.81■□□□□ 0.12
SEC13-208ENST00000397109 LDHAP00338 332 aaKnown RBP15.81■□□□□ 0.12
SEC13-208ENST00000397109 MYBP10242 640 aa15.81■□□□□ 0.12
SEC13-208ENST00000397109 GARTP22102 1010 aa15.81■□□□□ 0.12
SEC13-208ENST00000397109 PAX3P23760 479 aa15.81■□□□□ 0.12
SEC13-208ENST00000397109 BRCC3P46736 316 aa15.81■□□□□ 0.12
SEC13-208ENST00000397109 ACOT2P49753 483 aa15.81■□□□□ 0.12
SEC13-208ENST00000397109 ZSCAN23Q3MJ62 389 aa15.81■□□□□ 0.12
SEC13-208ENST00000397109 RNF135Q8IUD6 432 aa15.81■□□□□ 0.12
SEC13-208ENST00000397109 GLYCTKQ8IVS8 523 aa15.81■□□□□ 0.12
SEC13-208ENST00000397109 KREMEN2Q8NCW0 462 aa15.81■□□□□ 0.12
SEC13-208ENST00000397109 BEST2Q8NFU1 509 aa15.81■□□□□ 0.12
SEC13-208ENST00000397109 KHSRPQ92945 711 aaKnown RBP eCLIP15.81■□□□□ 0.12
SEC13-208ENST00000397109 SUSD3Q96L08 255 aa15.81■□□□□ 0.12
SEC13-208ENST00000397109 POMKQ9H5K3 350 aa15.81■□□□□ 0.12
SEC13-208ENST00000397109 EPHX3Q9H6B9 360 aa15.81■□□□□ 0.12
SEC13-208ENST00000397109 ZDHHC7Q9NXF8 308 aa15.81■□□□□ 0.12
SEC13-208ENST00000397109 TUBGCP4Q9UGJ1 667 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms