RNA–Protein interactions for RNA: ENST00000396101.7

LST1-212, leukocyte specific transcript 1, humanhuman

TSL 1 (best) BASIC

Gene LST1, Length 459 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LST1-212ENST00000396101 MTHFD1LQ6UB35 978 aa12.03□□□□□ -0.48
LST1-212ENST00000396101 B3GNT9Q6UX72 402 aa12.03□□□□□ -0.48
LST1-212ENST00000396101 DEFB123Q8N688 67 aa12.03□□□□□ -0.48
LST1-212ENST00000396101 TNPO1Q92973 898 aaKnown RBP12.03□□□□□ -0.48
LST1-212ENST00000396101 FAM20AQ96MK3 541 aa12.03□□□□□ -0.48
LST1-212ENST00000396101 FAM161BQ96MY7 647 aa12.03□□□□□ -0.48
LST1-212ENST00000396101 CBX8Q9HC52 389 aa12.03□□□□□ -0.48
LST1-212ENST00000396101 KIF28PB7ZC32 967 aa12.02□□□□□ -0.49
LST1-212ENST00000396101 CYP26A1O43174 497 aa12.02□□□□□ -0.49
LST1-212ENST00000396101 CXCL10P02778 98 aa12.02□□□□□ -0.49
LST1-212ENST00000396101 PFKMP08237 780 aa12.02□□□□□ -0.49
LST1-212ENST00000396101 ACTN1P12814 892 aa12.02□□□□□ -0.49
LST1-212ENST00000396101 GJB2P29033 226 aa12.02□□□□□ -0.49
LST1-212ENST00000396101 SFNP31947 248 aa12.02□□□□□ -0.49
LST1-212ENST00000396101 JAK3P52333 1124 aa12.02□□□□□ -0.49
LST1-212ENST00000396101 RABGGTBP53611 331 aa12.02□□□□□ -0.49
LST1-212ENST00000396101 SMAD3P84022 425 aaKnown RBP12.02□□□□□ -0.49
LST1-212ENST00000396101 RING1Q06587 406 aa12.02□□□□□ -0.49
LST1-212ENST00000396101 CDK5R2Q13319 367 aa12.02□□□□□ -0.49
LST1-212ENST00000396101 ZNF174Q15697 407 aa12.02□□□□□ -0.49
LST1-212ENST00000396101 ZNF484Q5JVG2 852 aa12.02□□□□□ -0.49
LST1-212ENST00000396101 SCARA3Q6AZY7 606 aa12.02□□□□□ -0.49
LST1-212ENST00000396101 TAF2Q6P1X5 1199 aa12.02□□□□□ -0.49
LST1-212ENST00000396101 TMCO2Q7Z6W1 182 aaPredicted RBP12.02□□□□□ -0.49
LST1-212ENST00000396101 RNF214Q8ND24 703 aa12.02□□□□□ -0.49
LST1-212ENST00000396101 DBF4BQ8NFT6 615 aa12.02□□□□□ -0.49
LST1-212ENST00000396101 ISL2Q96A47 359 aa12.02□□□□□ -0.49
LST1-212ENST00000396101 PSMG3-AS1Q96PY0 264 aa12.02□□□□□ -0.49
LST1-212ENST00000396101 NAP1L4Q99733 375 aaKnown RBP12.02□□□□□ -0.49
LST1-212ENST00000396101 DUSP9Q99956 384 aaKnown RBP12.02□□□□□ -0.49
LST1-212ENST00000396101 SH2D3AQ9BRG2 576 aa12.02□□□□□ -0.49
LST1-212ENST00000396101 MTIF3Q9H2K0 278 aaKnown RBP12.02□□□□□ -0.49
LST1-212ENST00000396101 NRBP2Q9NSY0 501 aa12.02□□□□□ -0.49
LST1-212ENST00000396101 VAV3Q9UKW4 847 aa12.02□□□□□ -0.49
LST1-212ENST00000396101 PCDHA2Q9Y5H9 948 aa12.02□□□□□ -0.49
LST1-212ENST00000396101 TMEM150BA6NC51 233 aa12.01□□□□□ -0.49
LST1-212ENST00000396101 STBD1O95210 358 aa12.01□□□□□ -0.49
LST1-212ENST00000396101 BAG4O95429 457 aaKnown RBP12.01□□□□□ -0.49
LST1-212ENST00000396101 PARNO95453 639 aaKnown RBP12.01□□□□□ -0.49
LST1-212ENST00000396101 MYOGP15173 224 aa12.01□□□□□ -0.49
LST1-212ENST00000396101 ATP2A2P16615 1042 aaKnown RBP12.01□□□□□ -0.49
LST1-212ENST00000396101 EIF4BP23588 611 aaKnown RBP12.01□□□□□ -0.49
LST1-212ENST00000396101 MCM7P33993 719 aa12.01□□□□□ -0.49
LST1-212ENST00000396101 TXKP42681 527 aa12.01□□□□□ -0.49
LST1-212ENST00000396101 GNL2Q13823 731 aaKnown RBP12.01□□□□□ -0.49
LST1-212ENST00000396101 CALCRLQ16602 461 aa12.01□□□□□ -0.49
LST1-212ENST00000396101 LLGL2Q6P1M3 1020 aa12.01□□□□□ -0.49
LST1-212ENST00000396101 RPAINQ86UA6 219 aa12.01□□□□□ -0.49
LST1-212ENST00000396101 RSPH3Q86UC2 560 aa12.01□□□□□ -0.49
LST1-212ENST00000396101 KIAA0319LQ8IZA0 1049 aa12.01□□□□□ -0.49
LST1-212ENST00000396101 METTL13Q8N6R0 699 aa12.01□□□□□ -0.49
LST1-212ENST00000396101 TMEM60Q9H2L4 133 aa12.01□□□□□ -0.49
LST1-212ENST00000396101 FOXP1Q9H334 677 aaPredicted RBP12.01□□□□□ -0.49
LST1-212ENST00000396101 RGL1Q9NZL6 768 aa12.01□□□□□ -0.49
LST1-212ENST00000396101 SMC3Q9UQE7 1217 aa12.01□□□□□ -0.49
LST1-212ENST00000396101 AK5Q9Y6K8 562 aa12.01□□□□□ -0.49
LST1-212ENST00000396101 TBX3O15119 743 aa12□□□□□ -0.49
LST1-212ENST00000396101 MRPS6P82932 125 aaKnown RBP12□□□□□ -0.49
LST1-212ENST00000396101 PRKCEQ02156 737 aa12□□□□□ -0.49
LST1-212ENST00000396101 PPP2R5CQ13362 524 aa12□□□□□ -0.49
LST1-212ENST00000396101 PLEKHG4Q58EX7 1191 aa12□□□□□ -0.49
LST1-212ENST00000396101 MCTP1Q6DN14 999 aa12□□□□□ -0.49
LST1-212ENST00000396101 NCAPH2Q6IBW4 605 aa12□□□□□ -0.49
LST1-212ENST00000396101 CNKSR3Q6P9H4 555 aa12□□□□□ -0.49
LST1-212ENST00000396101 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12□□□□□ -0.49
LST1-212ENST00000396101 SV2BQ7L1I2 683 aa12□□□□□ -0.49
LST1-212ENST00000396101 NOSTRINQ8IVI9 506 aa12□□□□□ -0.49
LST1-212ENST00000396101 RDM1Q8NG50 284 aa12□□□□□ -0.49
LST1-212ENST00000396101 MTMR9Q96QG7 549 aa12□□□□□ -0.49
LST1-212ENST00000396101 TTYH1Q9H313 450 aaPredicted RBP12□□□□□ -0.49
LST1-212ENST00000396101 PCDHA12Q9UN75 941 aa12□□□□□ -0.49
LST1-212ENST00000396101 GINS2Q9Y248 185 aa12□□□□□ -0.49
LST1-212ENST00000396101 CDY2AQ9Y6F7 541 aa12□□□□□ -0.49
LST1-212ENST00000396101 A0A0C4DFX4 3053 aa11.99□□□□□ -0.49
LST1-212ENST00000396101 A0A087WWV3 80 aa11.99□□□□□ -0.49
LST1-212ENST00000396101 SMIM35A0A1B0GVV1 85 aa11.99□□□□□ -0.49
LST1-212ENST00000396101 NEMFO60524 1076 aa11.99□□□□□ -0.49
LST1-212ENST00000396101 CAND2O75155 1236 aa11.99□□□□□ -0.49
LST1-212ENST00000396101 C22orf31O95567 290 aa11.99□□□□□ -0.49
LST1-212ENST00000396101 WNT11O96014 354 aa11.99□□□□□ -0.49
LST1-212ENST00000396101 GHRP10912 638 aa11.99□□□□□ -0.49
LST1-212ENST00000396101 U2AF2P26368 475 aaKnown RBP eCLIP11.99□□□□□ -0.49
LST1-212ENST00000396101 QARSP47897 775 aaKnown RBP11.99□□□□□ -0.49
LST1-212ENST00000396101 TOB1P50616 345 aaPredicted RBP11.99□□□□□ -0.49
LST1-212ENST00000396101 WDR5P61964 334 aaKnown RBP11.99□□□□□ -0.49
LST1-212ENST00000396101 MGAT3Q09327 533 aa11.99□□□□□ -0.49
LST1-212ENST00000396101 LPIN1Q14693 890 aa11.99□□□□□ -0.49
LST1-212ENST00000396101 EPHA7Q15375 998 aa11.99□□□□□ -0.49
LST1-212ENST00000396101 LARP1BQ659C4 914 aaKnown RBP11.99□□□□□ -0.49
LST1-212ENST00000396101 EFCAB12Q6NXP0 572 aa11.99□□□□□ -0.49
LST1-212ENST00000396101 SLFN12Q8IYM2 578 aa11.99□□□□□ -0.49
LST1-212ENST00000396101 SEPT8Q92599 483 aa11.99□□□□□ -0.49
LST1-212ENST00000396101 GAL3ST3Q96A11 431 aa11.99□□□□□ -0.49
LST1-212ENST00000396101 TIFAQ96CG3 184 aa11.99□□□□□ -0.49
LST1-212ENST00000396101 PPP1R16BQ96T49 567 aa11.99□□□□□ -0.49
LST1-212ENST00000396101 TTC12Q9H892 705 aaPredicted RBP11.99□□□□□ -0.49
LST1-212ENST00000396101 AGO3Q9H9G7 860 aaKnown RBP11.99□□□□□ -0.49
LST1-212ENST00000396101 MTMR10Q9NXD2 777 aa11.99□□□□□ -0.49
LST1-212ENST00000396101 WRAP73Q9P2S5 460 aaPredicted RBP11.99□□□□□ -0.49
LST1-212ENST00000396101 CCDC39Q9UFE4 941 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms